RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 METTL22Q9BUU2 404 aaPredicted RBP8.24□□□□□ -1.09
VPS8-201ENST00000287546 PTCD1O75127 700 aaKnown RBP8.24□□□□□ -1.09
VPS8-201ENST00000287546 CCDC47Q96A33 483 aaKnown RBP8.24□□□□□ -1.09
VPS8-201ENST00000287546 CREBRFQ8IUR6 639 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 BIN2Q9UBW5 565 aaPredicted RBP8.23□□□□□ -1.09
VPS8-201ENST00000287546 BEND3Q5T5X7 828 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 TRIM21P19474 475 aaKnown RBP8.23□□□□□ -1.09
VPS8-201ENST00000287546 CWC27Q6UX04 472 aaKnown RBP8.23□□□□□ -1.09
VPS8-201ENST00000287546 PLCD3Q8N3E9 789 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 WDR17Q8IZU2 1322 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
VPS8-201ENST00000287546 CEMIPQ8WUJ3 1361 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 STRCP1A6NGW2 1772 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 ZSCAN25Q6NSZ9 544 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 UBE3BQ7Z3V4 1068 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 SIRT2Q8IXJ6 389 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 RAD50Q92878 1312 aa8.23□□□□□ -1.09
VPS8-201ENST00000287546 POLD1P28340 1107 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 CARD10Q9BWT7 1032 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 USP26Q9BXU7 913 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.22□□□□□ -1.092e-6■■■■□ 21.9
VPS8-201ENST00000287546 MRE11P49959 708 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 RBM5P52756 815 aaKnown RBP eCLIP8.22□□□□□ -1.09
VPS8-201ENST00000287546 CPLX2Q6PUV4 134 aaKnown RBP8.22□□□□□ -1.09
VPS8-201ENST00000287546 FAM184AQ8NB25 1140 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 DNAJC2Q99543 621 aaKnown RBP8.22□□□□□ -1.09
VPS8-201ENST00000287546 BCL11BQ9C0K0 894 aaPredicted RBP8.22□□□□□ -1.09
VPS8-201ENST00000287546 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
VPS8-201ENST00000287546 STAP2Q9UGK3 403 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 PNMA6EA0A0J9YXQ4 647 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 TPM2P07951 284 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 CT47A1Q5JQC4 288 aaPredicted RBP8.22□□□□□ -1.09
VPS8-201ENST00000287546 TBC1D2BQ9UPU7 963 aa8.22□□□□□ -1.09
VPS8-201ENST00000287546 CHMLP26374 656 aa8.21□□□□□ -1.09
VPS8-201ENST00000287546 TRDNQ13061 729 aa8.21□□□□□ -1.09
VPS8-201ENST00000287546 TTC39AQ5SRH9 613 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 WDR78Q5VTH9 848 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 BLOC1S2Q6QNY1 142 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 ZNF496Q96IT1 587 aaPredicted RBP8.21□□□□□ -1.1
VPS8-201ENST00000287546 NGLY1Q96IV0 654 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 HMG20BQ9P0W2 317 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 CWF19L2Q2TBE0 894 aaKnown RBP8.21□□□□□ -1.1
VPS8-201ENST00000287546 MCTP1Q6DN14 999 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 CTNNA3Q9UI47 895 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 ZNF652Q9Y2D9 606 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 MAP4K4O95819 1239 aaPredicted RBP8.21□□□□□ -1.1
VPS8-201ENST00000287546 CA8P35219 290 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 IL15P40933 162 aaPredicted RBP8.21□□□□□ -1.1
VPS8-201ENST00000287546 C8orf37Q96NL8 207 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 CNNM1Q9NRU3 951 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 AXIN2Q9Y2T1 843 aa8.21□□□□□ -1.1
VPS8-201ENST00000287546 H3BQV1 296 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 NBPF7P0C2Y1 421 aaPredicted RBP8.2□□□□□ -1.1
VPS8-201ENST00000287546 IFFO2Q5TF58 517 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 PIK3C2AO00443 1686 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 KCNQ3O43525 872 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 GSPT1P15170 499 aaKnown RBP8.2□□□□□ -1.1
VPS8-201ENST00000287546 IFIT5Q13325 482 aaKnown RBP8.2□□□□□ -1.1
VPS8-201ENST00000287546 GCKRQ14397 625 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 CCDC191Q8NCU4 936 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 DNAI2Q9GZS0 605 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 PDRG1Q9NUG6 133 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 ATP10DQ9P241 1426 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 PES1O00541 588 aaKnown RBP8.2□□□□□ -1.1
VPS8-201ENST00000287546 NWD1Q149M9 1564 aa8.2□□□□□ -1.1
VPS8-201ENST00000287546 CCDC8Q9H0W5 538 aaPredicted RBP8.2□□□□□ -1.1
VPS8-201ENST00000287546 U3KPZ7 1027 aaPredicted RBP8.2□□□□□ -1.1
VPS8-201ENST00000287546 HMGB1P09429 215 aaKnown RBP8.19□□□□□ -1.1
VPS8-201ENST00000287546 WASHC4Q2M389 1173 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 RALYLQ86SE5 291 aaKnown RBP8.19□□□□□ -1.1
VPS8-201ENST00000287546 JAKMIP1Q96N16 626 aaKnown RBP8.19□□□□□ -1.1
VPS8-201ENST00000287546 BOLA2Q9H3K6 86 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 ZBTB3Q9H5J0 574 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 BICC1Q9H694 974 aaKnown RBP8.19□□□□□ -1.1
VPS8-201ENST00000287546 KAT6BQ8WYB5 2073 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 TPM3P06753 285 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 HSPA1LP34931 641 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 OTUD7AQ8TE49 926 aaPredicted RBP8.19□□□□□ -1.1
VPS8-201ENST00000287546 BTG4Q9NY30 223 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 LIMCH1Q9UPQ0 1083 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 DLG5Q8TDM6 1919 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 NEURL1BA8MQ27 555 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 MTX1Q13505 466 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 SMARCC1Q92922 1105 aaPredicted RBP8.19□□□□□ -1.1
VPS8-201ENST00000287546 CACNA1FO60840 1977 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 POLA2Q14181 598 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 TSR1Q2NL82 804 aaKnown RBP8.19□□□□□ -1.1
VPS8-201ENST00000287546 INTS4Q96HW7 963 aaKnown RBP8.19□□□□□ -1.1
VPS8-201ENST00000287546 CPDO75976 1380 aa8.19□□□□□ -1.1
VPS8-201ENST00000287546 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
VPS8-201ENST00000287546 LETM1O95202 739 aaPredicted RBP8.18□□□□□ -1.1
VPS8-201ENST00000287546 RDXP35241 583 aaKnown RBP8.18□□□□□ -1.1
VPS8-201ENST00000287546 TNPO1Q92973 898 aaKnown RBP8.18□□□□□ -1.1
VPS8-201ENST00000287546 DRC1Q96MC2 740 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 ANKRD18BA2A2Z9 1011 aa8.18□□□□□ -1.1
VPS8-201ENST00000287546 IFIT1P09914 478 aaKnown RBP8.18□□□□□ -1.1
VPS8-201ENST00000287546 CASTP20810 708 aaKnown RBP8.18□□□□□ -1.1
VPS8-201ENST00000287546 TSHZ3Q63HK5 1081 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms