RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 NLRP10Q86W26 655 aa24.43■■□□□ 1.5
MALSU1-201ENST00000287543 FAM9BQ8IZU0 186 aa24.43■■□□□ 1.5
MALSU1-201ENST00000287543 TAOK3Q9H2K8 898 aa24.43■■□□□ 1.5
MALSU1-201ENST00000287543 GOLGA2Q08379 1002 aa24.42■■□□□ 1.5
MALSU1-201ENST00000287543 RTKN2Q8IZC4 609 aa24.42■■□□□ 1.5
MALSU1-201ENST00000287543 C7orf43Q8WVR3 580 aa24.42■■□□□ 1.5
MALSU1-201ENST00000287543 RBM17Q96I25 401 aaKnown RBP24.42■■□□□ 1.5
MALSU1-201ENST00000287543 ABCC12Q96J65 1359 aa24.42■■□□□ 1.5
MALSU1-201ENST00000287543 CC2D2BQ6DHV5 1058 aa24.41■■□□□ 1.5
MALSU1-201ENST00000287543 GRIPAP1Q4V328 841 aa24.4■■□□□ 1.5
MALSU1-201ENST00000287543 CRAMP1Q96RY5 1269 aa24.4■■□□□ 1.5
MALSU1-201ENST00000287543 TRMT112Q9UI30 125 aaKnown RBP24.4■■□□□ 1.5
MALSU1-201ENST00000287543 SH3TC1Q8TE82 1336 aa24.39■■□□□ 1.5
MALSU1-201ENST00000287543 DDX58O95786 925 aaKnown RBP24.39■■□□□ 1.49
MALSU1-201ENST00000287543 TRIM28Q13263 835 aaKnown RBP24.39■■□□□ 1.49
MALSU1-201ENST00000287543 RIC3Q7Z5B4 369 aa24.39■■□□□ 1.49
MALSU1-201ENST00000287543 TSR2Q969E8 191 aaKnown RBP24.39■■□□□ 1.49
MALSU1-201ENST00000287543 DLEC1Q9Y238 1755 aa24.39■■□□□ 1.49
MALSU1-201ENST00000287543 ISCA1Q9BUE6 129 aa24.38■■□□□ 1.49
MALSU1-201ENST00000287543 STK31Q9BXU1 1019 aa24.38■■□□□ 1.49
MALSU1-201ENST00000287543 ANKRD31Q8N7Z5 1873 aa24.38■■□□□ 1.49
MALSU1-201ENST00000287543 KIF3CO14782 793 aa24.37■■□□□ 1.49
MALSU1-201ENST00000287543 TWISTNBQ3B726 338 aaPredicted RBP24.37■■□□□ 1.49
MALSU1-201ENST00000287543 DPY19L2Q6NUT2 758 aa24.37■■□□□ 1.49
MALSU1-201ENST00000287543 TMX4Q9H1E5 349 aaPredicted RBP24.37■■□□□ 1.49
MALSU1-201ENST00000287543 FKBP4Q02790 459 aaKnown RBP eCLIP24.36■■□□□ 1.49
MALSU1-201ENST00000287543 TSPYL6Q8N831 410 aa24.36■■□□□ 1.49
MALSU1-201ENST00000287543 SALL2Q9Y467 1007 aaPredicted RBP24.36■■□□□ 1.49
MALSU1-201ENST00000287543 SENP3-EIF4A1A0A087X0R7 540 aa24.35■■□□□ 1.49
MALSU1-201ENST00000287543 GLTPD2A6NH11 291 aa24.35■■□□□ 1.49
MALSU1-201ENST00000287543 HSP90B1P14625 803 aaKnown RBP24.35■■□□□ 1.49
MALSU1-201ENST00000287543 PRELPP51888 382 aa24.35■■□□□ 1.49
MALSU1-201ENST00000287543 PHAXQ9H814 394 aaKnown RBP24.35■■□□□ 1.49
MALSU1-201ENST00000287543 C16orf71Q8IYS4 520 aaPredicted RBP24.34■■□□□ 1.49
MALSU1-201ENST00000287543 TOMM70O94826 608 aa24.33■■□□□ 1.49
MALSU1-201ENST00000287543 MYH16Q9H6N6 1097 aa24.33■■□□□ 1.49
MALSU1-201ENST00000287543 NMRK2Q9NPI5 230 aa24.33■■□□□ 1.49
MALSU1-201ENST00000287543 ATP5J2-PTCD1G3V325 749 aa24.32■■□□□ 1.48
MALSU1-201ENST00000287543 BBOX1O75936 387 aa24.32■■□□□ 1.48
MALSU1-201ENST00000287543 COL11A2P13942 1736 aaPredicted RBP24.32■■□□□ 1.48
MALSU1-201ENST00000287543 FANCIQ9NVI1 1328 aa24.32■■□□□ 1.48
MALSU1-201ENST00000287543 NUP98P52948 1817 aa24.31■■□□□ 1.48
MALSU1-201ENST00000287543 PPEF1O14829 653 aaPredicted RBP24.31■■□□□ 1.48
MALSU1-201ENST00000287543 HCLS1P14317 486 aaPredicted RBP24.31■■□□□ 1.48
MALSU1-201ENST00000287543 PSMD1Q99460 953 aa24.31■■□□□ 1.48
MALSU1-201ENST00000287543 C3orf67Q6ZVT6 689 aa24.3■■□□□ 1.48
MALSU1-201ENST00000287543 DDX46Q7L014 1031 aaKnown RBP24.3■■□□□ 1.48
MALSU1-201ENST00000287543 CCDC191Q8NCU4 936 aa24.3■■□□□ 1.48
MALSU1-201ENST00000287543 KSR2Q6VAB6 950 aa24.29■■□□□ 1.48
MALSU1-201ENST00000287543 SYNE4Q8N205 404 aa24.29■■□□□ 1.48
MALSU1-201ENST00000287543 METTL22Q9BUU2 404 aaPredicted RBP24.29■■□□□ 1.48
MALSU1-201ENST00000287543 RRAGCQ9HB90 399 aa24.29■■□□□ 1.48
MALSU1-201ENST00000287543 SLC4A2P04920 1241 aa24.28■■□□□ 1.48
MALSU1-201ENST00000287543 VEGFAP15692 232 aaPredicted RBP24.28■■□□□ 1.48
MALSU1-201ENST00000287543 TMC4Q7Z404 712 aa24.28■■□□□ 1.48
MALSU1-201ENST00000287543 ZBTB38Q8NAP3 1195 aaPredicted RBP24.28■■□□□ 1.48
MALSU1-201ENST00000287543 FAM89AQ96GI7 184 aa24.28■■□□□ 1.48
MALSU1-201ENST00000287543 MYD88Q99836 296 aa24.28■■□□□ 1.48
MALSU1-201ENST00000287543 CCER2I3L3R5 266 aa24.27■■□□□ 1.48
MALSU1-201ENST00000287543 SF3B3Q15393 1217 aaKnown RBP24.27■■□□□ 1.48
MALSU1-201ENST00000287543 RBM46Q8TBY0 533 aaKnown RBP24.27■■□□□ 1.48
MALSU1-201ENST00000287543 ATP6V0A2Q9Y487 856 aa24.27■■□□□ 1.48
MALSU1-201ENST00000287543 IARSP41252 1262 aaKnown RBP24.26■■□□□ 1.47
MALSU1-201ENST00000287543 NEXNQ0ZGT2 675 aa24.26■■□□□ 1.47
MALSU1-201ENST00000287543 OLFM4Q6UX06 510 aa24.26■■□□□ 1.47
MALSU1-201ENST00000287543 ZNF277Q9NRM2 450 aaPredicted RBP24.26■■□□□ 1.47
MALSU1-201ENST00000287543 CWC25Q9NXE8 425 aaPredicted RBP24.26■■□□□ 1.47
MALSU1-201ENST00000287543 MAP3K2Q9Y2U5 619 aa24.26■■□□□ 1.47
MALSU1-201ENST00000287543 ABCC4O15439 1325 aa24.26■■□□□ 1.47
MALSU1-201ENST00000287543 SLX4Q8IY92 1834 aa24.26■■□□□ 1.47
MALSU1-201ENST00000287543 IRS4O14654 1257 aaPredicted RBP24.25■■□□□ 1.47
MALSU1-201ENST00000287543 VAMP4O75379 141 aa24.25■■□□□ 1.47
MALSU1-201ENST00000287543 EXOSC9Q06265 439 aaKnown RBP24.25■■□□□ 1.47
MALSU1-201ENST00000287543 GRAPQ13588 217 aa24.25■■□□□ 1.47
MALSU1-201ENST00000287543 SP8Q8IXZ3 490 aa24.25■■□□□ 1.47
MALSU1-201ENST00000287543 GRAPLQ8TC17 118 aaPredicted RBP24.25■■□□□ 1.47
MALSU1-201ENST00000287543 VPS33BQ9H267 617 aa24.25■■□□□ 1.47
MALSU1-201ENST00000287543 PI4KAP2A4QPH2 592 aa24.24■■□□□ 1.47
MALSU1-201ENST00000287543 PI4KAP1Q8N8J0 262 aa24.24■■□□□ 1.47
MALSU1-201ENST00000287543 SUPT20HQ8NEM7 779 aa24.24■■□□□ 1.47
MALSU1-201ENST00000287543 JDP2Q8WYK2 163 aa24.24■■□□□ 1.47
MALSU1-201ENST00000287543 TCERG1O14776 1098 aaKnown RBP24.23■■□□□ 1.47
MALSU1-201ENST00000287543 PCCAP05165 728 aaPredicted RBP24.23■■□□□ 1.47
MALSU1-201ENST00000287543 HSPA6P17066 643 aa24.23■■□□□ 1.47
MALSU1-201ENST00000287543 FSTL1Q12841 308 aa24.23■■□□□ 1.47
MALSU1-201ENST00000287543 TNRC6CQ9HCJ0 1690 aaKnown RBP24.22■■□□□ 1.47
MALSU1-201ENST00000287543 FLIIQ13045 1269 aa24.21■■□□□ 1.47
MALSU1-201ENST00000287543 ARFGEF2Q9Y6D5 1785 aa24.21■■□□□ 1.47
MALSU1-201ENST00000287543 SNED1Q8TER0 1413 aa24.2■■□□□ 1.46
MALSU1-201ENST00000287543 ZNF521Q96K83 1311 aa24.2■■□□□ 1.46
MALSU1-201ENST00000287543 RTL5Q5HYW3 569 aaPredicted RBP24.2■■□□□ 1.46
MALSU1-201ENST00000287543 SPINK5Q9NQ38 1064 aaPredicted RBP24.2■■□□□ 1.46
MALSU1-201ENST00000287543 IQCA1LA6NCM1 817 aa24.19■■□□□ 1.46
MALSU1-201ENST00000287543 FZD9O00144 591 aa24.19■■□□□ 1.46
MALSU1-201ENST00000287543 FKBP5Q13451 457 aaPredicted RBP24.19■■□□□ 1.46
MALSU1-201ENST00000287543 DPP8Q6V1X1 898 aaPredicted RBP24.19■■□□□ 1.46
MALSU1-201ENST00000287543 SMC1BQ8NDV3 1235 aa24.19■■□□□ 1.46
MALSU1-201ENST00000287543 ZNF428Q96B54 188 aa24.19■■□□□ 1.46
MALSU1-201ENST00000287543 RTFDC1Q9BY42 306 aaPredicted RBP24.19■■□□□ 1.46
MALSU1-201ENST00000287543 SBF1O95248 1867 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms