RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CCDC150Q8NCX0 1101 aa18.96■□□□□ 0.63
SH3RF1-201ENST00000284637 CCDC102BQ68D86 513 aa18.96■□□□□ 0.63
SH3RF1-201ENST00000284637 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.96■□□□□ 0.63
SH3RF1-201ENST00000284637 V9GYY5 206 aaPredicted RBP18.96■□□□□ 0.63
SH3RF1-201ENST00000284637 LIG1P18858 919 aa18.96■□□□□ 0.63
SH3RF1-201ENST00000284637 IQCA1Q86XH1 822 aa18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 PAF1Q8N7H5 531 aa18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 JARID2Q92833 1246 aaPredicted RBP18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 UBA5Q9GZZ9 404 aa18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 SEC63Q9UGP8 760 aaKnown RBP18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 MAGI1Q96QZ7 1491 aaPredicted RBP18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 WASLO00401 505 aaPredicted RBP18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 DNAJC25Q9H1X3 360 aa18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 NLRP5P59047 1200 aa18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 RNF216Q9NWF9 866 aaPredicted RBP18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 RSPH14Q9UHP6 348 aa18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 MTIF2P46199 727 aaKnown RBP18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 DNAI1Q9UI46 699 aa18.95■□□□□ 0.62
SH3RF1-201ENST00000284637 TUBB4AP04350 444 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 HLTFQ14527 1009 aaKnown RBP eCLIP18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 AMOTQ4VCS5 1084 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 ZGPATQ8N5A5 531 aaKnown RBP18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 TSG101Q99816 390 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 ZSCAN16Q9H4T2 348 aaPredicted RBP18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 CCDC194A0A1B0GVG4 234 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 ATP5J2-PTCD1G3V325 749 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 GBP2P32456 591 aaPredicted RBP18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 ANKRD44Q8N8A2 993 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 MATR3P43243 847 aaKnown RBP eCLIP18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 SPECC1Q5M775 1068 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 GOPCQ9HD26 462 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 HMG20BQ9P0W2 317 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 NF2P35240 595 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 UBASH3AP57075 661 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 UBE3BQ7Z3V4 1068 aa18.94■□□□□ 0.62
SH3RF1-201ENST00000284637 DDX46Q7L014 1031 aaKnown RBP18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 CCDC91Q7Z6B0 441 aa18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 TICAM2Q86XR7 235 aa18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 ZBTB3Q9H5J0 574 aa18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 EZRP15311 586 aaKnown RBP18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 TMEM67Q5HYA8 995 aa18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 F13A1P00488 732 aa18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 U2AF2P26368 475 aaKnown RBP eCLIP18.93■□□□□ 0.629e-8■■■■■ 32.2
SH3RF1-201ENST00000284637 IDI1Q13907 227 aa18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 WWC2Q6AWC2 1192 aa18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 SRRTQ9BXP5 876 aaKnown RBP18.93■□□□□ 0.62
SH3RF1-201ENST00000284637 VPS36Q86VN1 386 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 RBM8AQ9Y5S9 174 aaKnown RBP18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 NSD2O96028 1365 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 CAPN2P17655 700 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 SYKP43405 635 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 METAP2P50579 478 aaKnown RBP eCLIP18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 ANKLE2Q86XL3 938 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 C8orf58Q8NAV2 365 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 IFT140Q96RY7 1462 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 CAVIN4Q5BKX8 364 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 JADE2Q9NQC1 790 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 MPHOSPH10O00566 681 aaKnown RBP18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 SLC26A6Q9BXS9 759 aa18.92■□□□□ 0.62
SH3RF1-201ENST00000284637 PLB1Q6P1J6 1458 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 GOLGA6L10A0A0M3HER8 536 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 IDEP14735 1019 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 ANAPC15P60006 121 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 RBSNQ9H1K0 784 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 RNF41Q9H4P4 317 aaPredicted RBP18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 KIAA0586Q9BVV6 1533 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 NOS1P29475 1434 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 MAPKBP1O60336 1514 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 N4BP3O15049 544 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 UTP14CQ5TAP6 766 aaKnown RBP18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 TRMT112Q9UI30 125 aaKnown RBP18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 A0A1B0GUL7 405 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 AOPEPQ8N6M6 819 aa18.91■□□□□ 0.62
SH3RF1-201ENST00000284637 MRPL50Q8N5N7 158 aaKnown RBP18.9■□□□□ 0.62
SH3RF1-201ENST00000284637 PIK3R4Q99570 1358 aa18.9■□□□□ 0.62
SH3RF1-201ENST00000284637 GSTTP1A0A1W2PQM5 241 aa18.9■□□□□ 0.62
SH3RF1-201ENST00000284637 CATIPQ7Z7H3 387 aa18.9■□□□□ 0.62
SH3RF1-201ENST00000284637 KLF18A0A0U1RQI7 1052 aa18.9■□□□□ 0.62
SH3RF1-201ENST00000284637 NCOA7Q8NI08 942 aa18.9■□□□□ 0.62
SH3RF1-201ENST00000284637 GPTP24298 496 aa18.89■□□□□ 0.62
SH3RF1-201ENST00000284637 DMTNQ08495 405 aa18.89■□□□□ 0.62
SH3RF1-201ENST00000284637 MCM6Q14566 821 aa18.89■□□□□ 0.62
SH3RF1-201ENST00000284637 C14orf93Q9H972 538 aaKnown RBP18.89■□□□□ 0.62
SH3RF1-201ENST00000284637 FGFR1OPO95684 399 aaKnown RBP18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 ZNF445P59923 1031 aa18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 ALS2CR12Q96Q35 445 aa18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 NUTM2BA6NNL0 878 aaPredicted RBP18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 TMCO5BA8MYB1 307 aa18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 NUTM2EB1AL46 878 aaPredicted RBP18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 FBXO31Q5XUX0 539 aaPredicted RBP18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 NUTM2AQ8IVF1 878 aaPredicted RBP18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 ZNF287Q9HBT7 754 aa18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 TMOD3Q9NYL9 352 aa18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 ZNF500O60304 480 aaPredicted RBP18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 MICALL1Q8N3F8 863 aa18.89■□□□□ 0.61
SH3RF1-201ENST00000284637 RAB34Q9BZG1 259 aa18.88■□□□□ 0.61
SH3RF1-201ENST00000284637 PARD3Q8TEW0 1356 aa18.88■□□□□ 0.61
SH3RF1-201ENST00000284637 TYRO3Q06418 890 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 204.5 ms