RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PTCD1O75127 700 aaKnown RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 TCERG1LQ5VWI1 586 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 KRT23Q9C075 422 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 HAUS2Q9NVX0 235 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 NSD3Q9BZ95 1437 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 IBSPP21815 317 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-201ENST00000283254 IFNL2Q8IZJ0 200 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 PTPRCP08575 1304 aa4.67□□□□□ -1.66
SCN3A-201ENST00000283254 IDEP14735 1019 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 SSRP1Q08945 709 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 NFKBIBQ15653 356 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 NAP1L4Q99733 375 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 ECHDC1Q9NTX5 307 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 NOC2LQ9Y3T9 749 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 KDM4AO75164 1064 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 TUBB4AP04350 444 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 RFC4P35249 363 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 ZC3H6P61129 1189 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 KIF14Q15058 1648 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 RFX1P22670 979 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 CTAGE1Q96RT6 745 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 GLT8D2Q9H1C3 349 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 CWC25Q9NXE8 425 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 CNGA1P29973 690 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 SLC8A3P57103 927 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 DUSP27Q5VZP5 1158 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 ESR2Q92731 530 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 TNPO1Q92973 898 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 CD109Q6YHK3 1445 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 MTIF2P46199 727 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 SNX16P57768 344 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 KIAA0753Q2KHM9 967 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 SPECC1Q5M775 1068 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 SLC12A5Q9H2X9 1139 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 NDC80O14777 642 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 IARSP41252 1262 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 PRPF40BQ6NWY9 871 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 IFIT3O14879 490 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 AKR1B10O60218 316 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 ATP2A2P16615 1042 aaKnown RBP4.66□□□□□ -1.66
SCN3A-201ENST00000283254 FAM193AP78312 1265 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 CEP83Q9Y592 693 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 RALGAPBQ86X10 1494 aa4.66□□□□□ -1.66
SCN3A-201ENST00000283254 RTL9Q8NET4 1388 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 TSPY2A6NKD2 308 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 ZNF213O14771 459 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 TNNI2P48788 182 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 TUBB4BP68371 445 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 CKAP4Q07065 602 aaKnown RBP4.65□□□□□ -1.66
SCN3A-201ENST00000283254 STX1AQ16623 288 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 STK11IPQ8N1F8 1099 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 EVI5LQ96CN4 794 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 NYXQ9GZU5 481 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 NSRP1Q9H0G5 558 aaKnown RBP4.65□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC113Q9H0I3 377 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 EXOC1Q9NV70 894 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 NLRP5P59047 1200 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 CDCA7Q9BWT1 371 aaPredicted RBP4.65□□□□□ -1.66
SCN3A-201ENST00000283254 LIMCH1Q9UPQ0 1083 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 CALML3P27482 149 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 ALDH3A1P30838 453 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 CKAP2LQ8IYA6 745 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 NCOA7Q8NI08 942 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 JAKMIP2Q96AA8 810 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 VTI1AQ96AJ9 217 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 C1orf115Q9H7X2 142 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 MAGI1Q96QZ7 1491 aaPredicted RBP4.65□□□□□ -1.66
SCN3A-201ENST00000283254 C11orf95C9JLR9 678 aaPredicted RBP4.65□□□□□ -1.66
SCN3A-201ENST00000283254 PRC1O43663 620 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 GNAT2P19087 354 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC183Q5T5S1 534 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 MPRIPQ6WCQ1 1025 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 LMBR1Q8WVP7 490 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 FAM114A2Q9NRY5 505 aa4.65□□□□□ -1.66
SCN3A-201ENST00000283254 NCOA1Q15788 1441 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.65□□□□□ -1.67
SCN3A-201ENST00000283254 CALM1P0DP23 149 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 CALM2P0DP24 149 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 CALM3P0DP25 149 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 SPC24Q8NBT2 197 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.65□□□□□ -1.67
SCN3A-201ENST00000283254 SYNJ1O43426 1573 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 IQGAP2Q13576 1575 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 PHACTR2O75167 634 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 RAPGEF3O95398 923 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 SNRPA1P09661 255 aaKnown RBP4.65□□□□□ -1.67
SCN3A-201ENST00000283254 CCDC110Q8TBZ0 833 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 TMOD4Q9NZQ9 345 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 DNMBPQ6XZF7 1577 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 DENND4BO75064 1496 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-201ENST00000283254 CA8P35219 290 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 CCDC102BQ68D86 513 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 KLHL10Q6JEL2 608 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 CEP128Q6ZU80 1094 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 SMARCC2Q8TAQ2 1214 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 CCDC85AQ96PX6 553 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-201ENST00000283254 SMC6Q96SB8 1091 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 ANAPC4Q9UJX5 808 aa4.65□□□□□ -1.67
SCN3A-201ENST00000283254 MAP4K4O95819 1239 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 PRKCSHP14314 528 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms