RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 BABAM1Q9NWV8 329 aa20.05■□□□□ 0.8
SOD1-201ENST00000270142 C3orf67Q6ZVT6 689 aa20.04■□□□□ 0.8
SOD1-201ENST00000270142 SLC51AQ86UW1 340 aa20.04■□□□□ 0.8
SOD1-201ENST00000270142 PSMD1Q99460 953 aa20.04■□□□□ 0.8
SOD1-201ENST00000270142 TAF1DQ9H5J8 278 aaPredicted RBP20.04■□□□□ 0.8
SOD1-201ENST00000270142 FZD9O00144 591 aa20.03■□□□□ 0.8
SOD1-201ENST00000270142 HOXA10P31260 410 aaPredicted RBP20.03■□□□□ 0.8
SOD1-201ENST00000270142 SCN4AP35499 1836 aa20.02■□□□□ 0.8
SOD1-201ENST00000270142 NEUROD2Q15784 382 aa20.02■□□□□ 0.8
SOD1-201ENST00000270142 PARP10Q53GL7 1025 aa20.02■□□□□ 0.8
SOD1-201ENST00000270142 PPP1R42Q7Z4L9 355 aa20.02■□□□□ 0.8
SOD1-201ENST00000270142 LDHDQ86WU2 507 aa20.02■□□□□ 0.8
SOD1-201ENST00000270142 NECTIN2Q92692 538 aa20.02■□□□□ 0.8
SOD1-201ENST00000270142 CC2D2BQ6DHV5 1058 aa20.01■□□□□ 0.79
SOD1-201ENST00000270142 RBM17Q96I25 401 aaKnown RBP20.01■□□□□ 0.79
SOD1-201ENST00000270142 PCNTO95613 3336 aa20.01■□□□□ 0.79
SOD1-201ENST00000270142 COL4A5P29400 1685 aa20■□□□□ 0.79
SOD1-201ENST00000270142 PPEF1O14829 653 aaPredicted RBP20■□□□□ 0.79
SOD1-201ENST00000270142 KRT24Q2M2I5 525 aa20■□□□□ 0.79
SOD1-201ENST00000270142 CRAMP1Q96RY5 1269 aa20■□□□□ 0.79
SOD1-201ENST00000270142 CREBZFQ9NS37 354 aa20■□□□□ 0.79
SOD1-201ENST00000270142 HACL1Q9UJ83 578 aa20■□□□□ 0.79
SOD1-201ENST00000270142 RNF123Q5XPI4 1314 aa20■□□□□ 0.79
SOD1-201ENST00000270142 TCERG1O14776 1098 aaKnown RBP19.99■□□□□ 0.79
SOD1-201ENST00000270142 EAPPQ56P03 285 aaPredicted RBP19.99■□□□□ 0.79
SOD1-201ENST00000270142 COL13A1Q5TAT6 717 aaPredicted RBP19.99■□□□□ 0.79
SOD1-201ENST00000270142 COPS6Q7L5N1 327 aa19.99■□□□□ 0.79
SOD1-201ENST00000270142 UTP14AQ9BVJ6 771 aaKnown RBP19.99■□□□□ 0.79
SOD1-201ENST00000270142 TRIM35Q9UPQ4 493 aa19.99■□□□□ 0.79
SOD1-201ENST00000270142 PASKQ96RG2 1323 aa19.99■□□□□ 0.79
SOD1-201ENST00000270142 CHL1O00533 1208 aa19.98■□□□□ 0.79
SOD1-201ENST00000270142 HSPA1AP0DMV8 641 aaKnown RBP19.98■□□□□ 0.79
SOD1-201ENST00000270142 HSPA1BP0DMV9 641 aaKnown RBP19.98■□□□□ 0.79
SOD1-201ENST00000270142 EPHX2P34913 555 aa19.98■□□□□ 0.79
SOD1-201ENST00000270142 AIMP1Q12904 312 aaKnown RBP19.98■□□□□ 0.79
SOD1-201ENST00000270142 XAGE3Q8WTP9 111 aa19.98■□□□□ 0.79
SOD1-201ENST00000270142 JDP2Q8WYK2 163 aa19.98■□□□□ 0.79
SOD1-201ENST00000270142 RUNDC1Q96C34 613 aa19.98■□□□□ 0.79
SOD1-201ENST00000270142 NLRP3Q96P20 1036 aa19.98■□□□□ 0.79
SOD1-201ENST00000270142 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
SOD1-201ENST00000270142 SLC10A5Q5PT55 438 aa19.97■□□□□ 0.79
SOD1-201ENST00000270142 GPC2Q8N158 579 aa19.97■□□□□ 0.79
SOD1-201ENST00000270142 MKRN1Q9UHC7 482 aaKnown RBP19.97■□□□□ 0.79
SOD1-201ENST00000270142 LAS1LQ9Y4W2 734 aaKnown RBP19.97■□□□□ 0.79
SOD1-201ENST00000270142 ADAMTSL1Q8N6G6 1762 aa19.97■□□□□ 0.79
SOD1-201ENST00000270142 GRIPAP1Q4V328 841 aa19.96■□□□□ 0.79
SOD1-201ENST00000270142 HSP90AB3PQ58FF7 597 aa19.96■□□□□ 0.79
SOD1-201ENST00000270142 DDX21Q9NR30 783 aaKnown RBP eCLIP19.96■□□□□ 0.79
SOD1-201ENST00000270142 ADAMTS8Q9UP79 889 aa19.96■□□□□ 0.79
SOD1-201ENST00000270142 ABCC4O15439 1325 aa19.96■□□□□ 0.79
SOD1-201ENST00000270142 ANKRD36CQ5JPF3 1778 aa19.95■□□□□ 0.78
SOD1-201ENST00000270142 EIF6P56537 245 aaKnown RBP19.95■□□□□ 0.78
SOD1-201ENST00000270142 NLRP10Q86W26 655 aa19.95■□□□□ 0.78
SOD1-201ENST00000270142 LARGE2Q8N3Y3 721 aa19.95■□□□□ 0.78
SOD1-201ENST00000270142 CLEC11AQ9Y240 323 aa19.95■□□□□ 0.78
SOD1-201ENST00000270142 ITGBL1O95965 494 aaPredicted RBP19.94■□□□□ 0.78
SOD1-201ENST00000270142 TCIRG1Q13488 830 aa19.94■□□□□ 0.78
SOD1-201ENST00000270142 CHPF2Q9P2E5 772 aa19.94■□□□□ 0.78
SOD1-201ENST00000270142 GJA3Q9Y6H8 435 aa19.94■□□□□ 0.78
SOD1-201ENST00000270142 LTBP1Q14766 1721 aa19.93■□□□□ 0.78
SOD1-201ENST00000270142 HCLS1P14317 486 aaPredicted RBP19.93■□□□□ 0.78
SOD1-201ENST00000270142 PNMA8AQ86V59 439 aaPredicted RBP19.93■□□□□ 0.78
SOD1-201ENST00000270142 ATP6V0A2Q9Y487 856 aa19.93■□□□□ 0.78
SOD1-201ENST00000270142 CNTNAP1P78357 1384 aa19.93■□□□□ 0.78
SOD1-201ENST00000270142 HDGFL1Q5TGJ6 251 aa19.92■□□□□ 0.78
SOD1-201ENST00000270142 LAMB2P55268 1798 aa19.91■□□□□ 0.78
SOD1-201ENST00000270142 TMEM88BA6NKF7 163 aa19.91■□□□□ 0.78
SOD1-201ENST00000270142 PPIP5K2O43314 1243 aa19.91■□□□□ 0.78
SOD1-201ENST00000270142 SCNN1DP51172 638 aa19.91■□□□□ 0.78
SOD1-201ENST00000270142 AOC3Q16853 763 aa19.91■□□□□ 0.78
SOD1-201ENST00000270142 MAP1SQ66K74 1059 aaPredicted RBP19.91■□□□□ 0.78
SOD1-201ENST00000270142 NIM1KQ8IY84 436 aa19.91■□□□□ 0.78
SOD1-201ENST00000270142 ZNF428Q96B54 188 aa19.91■□□□□ 0.78
SOD1-201ENST00000270142 PRKRIP1Q9H875 184 aaPredicted RBP19.91■□□□□ 0.78
SOD1-201ENST00000270142 TRMT112Q9UI30 125 aaKnown RBP19.91■□□□□ 0.78
SOD1-201ENST00000270142 HOXB7P09629 217 aa19.9■□□□□ 0.78
SOD1-201ENST00000270142 CNTROBQ8N137 903 aa19.9■□□□□ 0.78
SOD1-201ENST00000270142 TMX4Q9H1E5 349 aaPredicted RBP19.9■□□□□ 0.78
SOD1-201ENST00000270142 SH3TC1Q8TE82 1336 aa19.9■□□□□ 0.78
SOD1-201ENST00000270142 LMOD1P29536 600 aaPredicted RBP19.89■□□□□ 0.77
SOD1-201ENST00000270142 CFAP44Q96MT7 982 aa19.89■□□□□ 0.77
SOD1-201ENST00000270142 BBOX1O75936 387 aa19.88■□□□□ 0.77
SOD1-201ENST00000270142 EPS15P42566 896 aa19.88■□□□□ 0.77
SOD1-201ENST00000270142 GRAPQ13588 217 aa19.88■□□□□ 0.77
SOD1-201ENST00000270142 SP8Q8IXZ3 490 aa19.88■□□□□ 0.77
SOD1-201ENST00000270142 PLBD2Q8NHP8 589 aa19.88■□□□□ 0.77
SOD1-201ENST00000270142 GRAPLQ8TC17 118 aaPredicted RBP19.88■□□□□ 0.77
SOD1-201ENST00000270142 RTFDC1Q9BY42 306 aaPredicted RBP19.88■□□□□ 0.77
SOD1-201ENST00000270142 MBIPQ9NS73 344 aa19.88■□□□□ 0.77
SOD1-201ENST00000270142 DUSP27Q5VZP5 1158 aa19.87■□□□□ 0.77
SOD1-201ENST00000270142 DPP8Q6V1X1 898 aaPredicted RBP19.87■□□□□ 0.77
SOD1-201ENST00000270142 ANKRD13DQ6ZTN6 518 aa19.87■□□□□ 0.77
SOD1-201ENST00000270142 DDX46Q7L014 1031 aaKnown RBP19.87■□□□□ 0.77
SOD1-201ENST00000270142 TNS4Q8IZW8 715 aa19.87■□□□□ 0.77
SOD1-201ENST00000270142 ISCA1Q9BUE6 129 aa19.87■□□□□ 0.77
SOD1-201ENST00000270142 VPS33BQ9H267 617 aa19.87■□□□□ 0.77
SOD1-201ENST00000270142 DBF4Q9UBU7 674 aaPredicted RBP19.87■□□□□ 0.77
SOD1-201ENST00000270142 MPNDQ8N594 471 aa19.86■□□□□ 0.77
SOD1-201ENST00000270142 SUPT20HQ8NEM7 779 aa19.86■□□□□ 0.77
SOD1-201ENST00000270142 ATP5J2-PTCD1G3V325 749 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms