RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 C17orf53Q8N3J3 647 aaPredicted RBP19.17■□□□□ 0.66
MAP1LC3B-201ENST00000268607 SRCIN1Q9C0H9 1055 aa19.17■□□□□ 0.66
MAP1LC3B-201ENST00000268607 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
MAP1LC3B-201ENST00000268607 PDIA4P13667 645 aaKnown RBP19.17■□□□□ 0.66
MAP1LC3B-201ENST00000268607 PRIMPOLQ96LW4 560 aa19.17■□□□□ 0.66
MAP1LC3B-201ENST00000268607 LRRCC1Q9C099 1032 aa19.17■□□□□ 0.66
MAP1LC3B-201ENST00000268607 TMX3Q96JJ7 454 aa19.16■□□□□ 0.66
MAP1LC3B-201ENST00000268607 EXOC5O00471 708 aa19.15■□□□□ 0.66
MAP1LC3B-201ENST00000268607 NEK4P51957 841 aa19.15■□□□□ 0.66
MAP1LC3B-201ENST00000268607 NOLC1Q14978 699 aaKnown RBP eCLIP19.15■□□□□ 0.66
MAP1LC3B-201ENST00000268607 ZNF330Q9Y3S2 320 aaPredicted RBP19.15■□□□□ 0.66
MAP1LC3B-201ENST00000268607 PPP1R42Q7Z4L9 355 aa19.15■□□□□ 0.66
MAP1LC3B-201ENST00000268607 DNAAF4Q8WXU2 420 aa19.15■□□□□ 0.66
MAP1LC3B-201ENST00000268607 KIF3AQ9Y496 699 aa19.15■□□□□ 0.66
MAP1LC3B-201ENST00000268607 ZBTB22O15209 634 aa19.14■□□□□ 0.65
MAP1LC3B-201ENST00000268607 GTF2F1P35269 517 aaKnown RBP eCLIP19.14■□□□□ 0.65
MAP1LC3B-201ENST00000268607 HMGN5P82970 282 aaKnown RBP19.14■□□□□ 0.65
MAP1LC3B-201ENST00000268607 PIBF1Q8WXW3 757 aa19.14■□□□□ 0.65
MAP1LC3B-201ENST00000268607 TTC12Q9H892 705 aaPredicted RBP19.14■□□□□ 0.65
MAP1LC3B-201ENST00000268607 GDPD2Q9HCC8 539 aa19.14■□□□□ 0.65
MAP1LC3B-201ENST00000268607 REC8O95072 547 aa19.14■□□□□ 0.65
MAP1LC3B-201ENST00000268607 BRD1O95696 1058 aa19.14■□□□□ 0.65
MAP1LC3B-201ENST00000268607 NOL8Q76FK4 1167 aaKnown RBP19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 PIGBQ92521 554 aa19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 CGNQ9P2M7 1197 aaKnown RBP19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 USP25Q9UHP3 1055 aa19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 SOS1Q07889 1333 aaPredicted RBP19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 GADD45BO75293 160 aaPredicted RBP19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 SURF6O75683 361 aaKnown RBP19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 BCL2L12Q9HB09 334 aa19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 SPATA31A1Q5TZJ5 1347 aa19.13■□□□□ 0.65
MAP1LC3B-201ENST00000268607 BEND3Q5T5X7 828 aa19.12■□□□□ 0.65
MAP1LC3B-201ENST00000268607 NUTM1Q86Y26 1132 aa19.12■□□□□ 0.65
MAP1LC3B-201ENST00000268607 RILPL2Q969X0 211 aa19.12■□□□□ 0.65
MAP1LC3B-201ENST00000268607 TRIM6-TRIM34B2RNG4 842 aa19.12■□□□□ 0.65
MAP1LC3B-201ENST00000268607 SRGAP3O43295 1099 aa19.12■□□□□ 0.65
MAP1LC3B-201ENST00000268607 MX1P20591 662 aa19.12■□□□□ 0.65
MAP1LC3B-201ENST00000268607 SYAP1Q96A49 352 aaPredicted RBP19.12■□□□□ 0.65
MAP1LC3B-201ENST00000268607 ERC2O15083 957 aa19.11■□□□□ 0.65
MAP1LC3B-201ENST00000268607 MEX3CQ5U5Q3 659 aaKnown RBP19.11■□□□□ 0.65
MAP1LC3B-201ENST00000268607 A1BGP04217 495 aa19.11■□□□□ 0.65
MAP1LC3B-201ENST00000268607 DDB1Q16531 1140 aa19.11■□□□□ 0.65
MAP1LC3B-201ENST00000268607 PDCL2Q8N4E4 241 aa19.11■□□□□ 0.65
MAP1LC3B-201ENST00000268607 TMOD3Q9NYL9 352 aa19.11■□□□□ 0.65
MAP1LC3B-201ENST00000268607 MAP3K2Q9Y2U5 619 aa19.11■□□□□ 0.65
MAP1LC3B-201ENST00000268607 SCN11AQ9UI33 1791 aa19.1■□□□□ 0.65
MAP1LC3B-201ENST00000268607 U2AF2P26368 475 aaKnown RBP eCLIP19.1■□□□□ 0.654e-11■■■■□ 26.1
MAP1LC3B-201ENST00000268607 PDIA6Q15084 440 aa19.1■□□□□ 0.65
MAP1LC3B-201ENST00000268607 TPRNQ4KMQ1 711 aa19.1■□□□□ 0.65
MAP1LC3B-201ENST00000268607 DBF4Q9UBU7 674 aaPredicted RBP19.1■□□□□ 0.65
MAP1LC3B-201ENST00000268607 MAP4K4O95819 1239 aaPredicted RBP19.1■□□□□ 0.65
MAP1LC3B-201ENST00000268607 CWF19L2Q2TBE0 894 aaKnown RBP19.1■□□□□ 0.65
MAP1LC3B-201ENST00000268607 PTF1AQ7RTS3 328 aa19.1■□□□□ 0.65
MAP1LC3B-201ENST00000268607 KDM3BQ7LBC6 1761 aa19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 KCNQ4P56696 695 aa19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 COL14A1Q05707 1796 aaKnown RBP19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 KCNQ2O43526 872 aa19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 MARCH10Q8NA82 808 aaPredicted RBP19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 FMNL2Q96PY5 1086 aa19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 OSBPL3Q9H4L5 887 aa19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 USP21Q9UK80 565 aa19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 ADCY9O60503 1353 aa19.09■□□□□ 0.65
MAP1LC3B-201ENST00000268607 ADCY5O95622 1261 aa19.08■□□□□ 0.65
MAP1LC3B-201ENST00000268607 HOXB7P09629 217 aa19.08■□□□□ 0.65
MAP1LC3B-201ENST00000268607 SSH3Q8TE77 659 aa19.08■□□□□ 0.65
MAP1LC3B-201ENST00000268607 JCADQ9P266 1359 aa19.08■□□□□ 0.65
MAP1LC3B-201ENST00000268607 ABCC6O95255 1503 aa19.08■□□□□ 0.65
MAP1LC3B-201ENST00000268607 CACNA1FO60840 1977 aa19.08■□□□□ 0.65
MAP1LC3B-201ENST00000268607 LRP6O75581 1613 aa19.08■□□□□ 0.64
MAP1LC3B-201ENST00000268607 COPS6Q7L5N1 327 aa19.08■□□□□ 0.64
MAP1LC3B-201ENST00000268607 IPO4Q8TEX9 1081 aaKnown RBP19.08■□□□□ 0.64
MAP1LC3B-201ENST00000268607 COL22A1Q8NFW1 1626 aaPredicted RBP19.08■□□□□ 0.64
MAP1LC3B-201ENST00000268607 SALL3Q9BXA9 1300 aa19.08■□□□□ 0.64
MAP1LC3B-201ENST00000268607 USP48Q86UV5 1035 aa19.08■□□□□ 0.64
MAP1LC3B-201ENST00000268607 PKD1L3Q7Z443 1732 aa19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 PHF14O94880 888 aa19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 XAGE3Q8WTP9 111 aa19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 HEG1Q9ULI3 1381 aa19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 PLCH1Q4KWH8 1693 aa19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 NKX1-1Q15270 411 aaPredicted RBP19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 ZNF771Q7L3S4 317 aaPredicted RBP19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 PLCD3Q8N3E9 789 aa19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 C9orf78Q9NZ63 289 aaPredicted RBP19.07■□□□□ 0.64
MAP1LC3B-201ENST00000268607 ERVV-2B6SEH9 535 aa19.06■□□□□ 0.64
MAP1LC3B-201ENST00000268607 CUL4AQ13619 759 aa19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 UVSSAQ2YD98 709 aa19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 ATG3Q9NT62 314 aa19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 PALD1Q9ULE6 856 aa19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 SIPA1L3O60292 1781 aaPredicted RBP19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 SHANK3Q9BYB0 1731 aa19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 PARP4Q9UKK3 1724 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 HCLS1P14317 486 aaPredicted RBP19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 TAF3Q5VWG9 929 aa19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 FAM184AQ8NB25 1140 aa19.05■□□□□ 0.64
MAP1LC3B-201ENST00000268607 RHPN1Q8TCX5 695 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms