RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 NUTM1Q86Y26 1132 aa25.28■■□□□ 1.64
LYSMD2-201ENST00000267838 TUBGCP6Q96RT7 1819 aa25.28■■□□□ 1.64
LYSMD2-201ENST00000267838 CRKLP46109 303 aaKnown RBP25.27■■□□□ 1.64
LYSMD2-201ENST00000267838 TSHZ3Q63HK5 1081 aa25.27■■□□□ 1.64
LYSMD2-201ENST00000267838 ANKRD36CQ5JPF3 1778 aa25.27■■□□□ 1.64
LYSMD2-201ENST00000267838 FOXO4P98177 505 aa25.26■■□□□ 1.63
LYSMD2-201ENST00000267838 HSP90AB3PQ58FF7 597 aa25.26■■□□□ 1.63
LYSMD2-201ENST00000267838 FBXO41Q8TF61 875 aa25.26■■□□□ 1.63
LYSMD2-201ENST00000267838 RFX5P48382 616 aaPredicted RBP25.26■■□□□ 1.63
LYSMD2-201ENST00000267838 HLFQ16534 295 aa25.26■■□□□ 1.63
LYSMD2-201ENST00000267838 DZIP3Q86Y13 1208 aaKnown RBP25.26■■□□□ 1.63
LYSMD2-201ENST00000267838 NHSQ6T4R5 1651 aa25.26■■□□□ 1.63
LYSMD2-201ENST00000267838 COL5A3P25940 1745 aaPredicted RBP25.25■■□□□ 1.63
LYSMD2-201ENST00000267838 ERVV-1B6SEH8 477 aa25.25■■□□□ 1.63
LYSMD2-201ENST00000267838 ONECUT3O60422 494 aaPredicted RBP25.25■■□□□ 1.63
LYSMD2-201ENST00000267838 EIF5P55010 431 aaKnown RBP25.25■■□□□ 1.63
LYSMD2-201ENST00000267838 CLASRPQ8N2M8 674 aaKnown RBP25.25■■□□□ 1.63
LYSMD2-201ENST00000267838 COPRSQ9NQ92 184 aa25.25■■□□□ 1.63
LYSMD2-201ENST00000267838 NUP98P52948 1817 aa25.24■■□□□ 1.63
LYSMD2-201ENST00000267838 LMBR1LQ6UX01 489 aa25.24■■□□□ 1.63
LYSMD2-201ENST00000267838 KLHDC4Q8TBB5 520 aa25.24■■□□□ 1.63
LYSMD2-201ENST00000267838 C22orf23Q9BZE7 217 aa25.24■■□□□ 1.63
LYSMD2-201ENST00000267838 SASH1O94885 1247 aa25.23■■□□□ 1.63
LYSMD2-201ENST00000267838 SIL1Q9H173 461 aa25.23■■□□□ 1.63
LYSMD2-201ENST00000267838 BTAF1O14981 1849 aa25.23■■□□□ 1.63
LYSMD2-201ENST00000267838 TBC1D2BQ9UPU7 963 aa25.23■■□□□ 1.63
LYSMD2-201ENST00000267838 MYH14Q7Z406 1995 aaKnown RBP25.22■■□□□ 1.63
LYSMD2-201ENST00000267838 PCCAP05165 728 aaPredicted RBP25.22■■□□□ 1.63
LYSMD2-201ENST00000267838 PTPN12Q05209 780 aaKnown RBP25.22■■□□□ 1.63
LYSMD2-201ENST00000267838 EIF5BO60841 1220 aaKnown RBP25.21■■□□□ 1.63
LYSMD2-201ENST00000267838 PTF1AQ7RTS3 328 aa25.21■■□□□ 1.63
LYSMD2-201ENST00000267838 USP42Q9H9J4 1324 aaKnown RBP25.21■■□□□ 1.63
LYSMD2-201ENST00000267838 FAM182BQ5T319 152 aa25.21■■□□□ 1.63
LYSMD2-201ENST00000267838 CASC1Q6TDU7 716 aa25.21■■□□□ 1.63
LYSMD2-201ENST00000267838 GPTP24298 496 aa25.2■■□□□ 1.62
LYSMD2-201ENST00000267838 NLRP10Q86W26 655 aa25.2■■□□□ 1.62
LYSMD2-201ENST00000267838 SEPT12Q8IYM1 358 aa25.2■■□□□ 1.62
LYSMD2-201ENST00000267838 ZBTB38Q8NAP3 1195 aaPredicted RBP25.2■■□□□ 1.62
LYSMD2-201ENST00000267838 QTRT2Q9H974 415 aaKnown RBP25.2■■□□□ 1.62
LYSMD2-201ENST00000267838 CHMP3Q9Y3E7 222 aa25.2■■□□□ 1.62
LYSMD2-201ENST00000267838 PI4K2BQ8TCG2 481 aa25.19■■□□□ 1.62
LYSMD2-201ENST00000267838 TTC41PQ6P2S7 1318 aa25.19■■□□□ 1.62
LYSMD2-201ENST00000267838 IFIT2P09913 472 aaKnown RBP25.18■■□□□ 1.62
LYSMD2-201ENST00000267838 SBF2Q86WG5 1849 aa25.18■■□□□ 1.62
LYSMD2-201ENST00000267838 AACSQ86V21 672 aa25.18■■□□□ 1.62
LYSMD2-201ENST00000267838 FAM89AQ96GI7 184 aa25.18■■□□□ 1.62
LYSMD2-201ENST00000267838 TRIM6-TRIM34B2RNG4 842 aa25.17■■□□□ 1.62
LYSMD2-201ENST00000267838 LINC00116Q8NCU8 138 aa25.17■■□□□ 1.62
LYSMD2-201ENST00000267838 PLA2G12BQ9BX93 195 aa25.17■■□□□ 1.62
LYSMD2-201ENST00000267838 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.17■■□□□ 1.62
LYSMD2-201ENST00000267838 CDHR2Q9BYE9 1310 aa25.17■■□□□ 1.62
LYSMD2-201ENST00000267838 RBM25P49756 843 aaKnown RBP25.16■■□□□ 1.62
LYSMD2-201ENST00000267838 ZNF34Q8IZ26 560 aa25.16■■□□□ 1.62
LYSMD2-201ENST00000267838 RILPL2Q969X0 211 aa25.16■■□□□ 1.62
LYSMD2-201ENST00000267838 EAF2Q96CJ1 260 aaPredicted RBP25.16■■□□□ 1.62
LYSMD2-201ENST00000267838 GPATCH3Q96I76 525 aa25.16■■□□□ 1.62
LYSMD2-201ENST00000267838 CAMTA2O94983 1202 aa25.14■■□□□ 1.62
LYSMD2-201ENST00000267838 ECHDC1Q9NTX5 307 aa25.14■■□□□ 1.62
LYSMD2-201ENST00000267838 ERC2O15083 957 aa25.13■■□□□ 1.61
LYSMD2-201ENST00000267838 GLRX3O76003 335 aaKnown RBP25.13■■□□□ 1.61
LYSMD2-201ENST00000267838 CNTNAP4Q9C0A0 1308 aa25.13■■□□□ 1.61
LYSMD2-201ENST00000267838 AK9Q5TCS8 1911 aa25.13■■□□□ 1.61
LYSMD2-201ENST00000267838 UBN2Q6ZU65 1347 aa25.13■■□□□ 1.61
LYSMD2-201ENST00000267838 KCNQ4P56696 695 aa25.12■■□□□ 1.61
LYSMD2-201ENST00000267838 TFCP2Q12800 502 aa25.12■■□□□ 1.61
LYSMD2-201ENST00000267838 NFKBIBQ15653 356 aa25.12■■□□□ 1.61
LYSMD2-201ENST00000267838 CCDC8Q9H0W5 538 aaPredicted RBP25.12■■□□□ 1.61
LYSMD2-201ENST00000267838 TRMT112Q9UI30 125 aaKnown RBP25.12■■□□□ 1.61
LYSMD2-201ENST00000267838 LY75O60449 1722 aa25.11■■□□□ 1.61
LYSMD2-201ENST00000267838 BCORQ6W2J9 1755 aa25.11■■□□□ 1.61
LYSMD2-201ENST00000267838 CSF1RP07333 972 aa25.1■■□□□ 1.61
LYSMD2-201ENST00000267838 SYNE4Q8N205 404 aa25.1■■□□□ 1.61
LYSMD2-201ENST00000267838 MAP4K4O95819 1239 aaPredicted RBP25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 CHMLP26374 656 aa25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 CCDC57Q2TAC2 916 aa25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 TNNI3KQ59H18 835 aa25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 ATG9AQ7Z3C6 839 aa25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 CNTROBQ8N137 903 aa25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 TLR7Q9NYK1 1049 aaKnown RBP25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 FPGT-TNNI3KV9GXZ4 949 aa25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 MYH3P11055 1940 aa25.09■■□□□ 1.61
LYSMD2-201ENST00000267838 IRS4O14654 1257 aaPredicted RBP25.08■■□□□ 1.61
LYSMD2-201ENST00000267838 BECN1Q14457 450 aa25.08■■□□□ 1.61
LYSMD2-201ENST00000267838 RC3H1Q5TC82 1133 aaKnown RBP25.08■■□□□ 1.61
LYSMD2-201ENST00000267838 ZNF594Q96JF6 807 aaPredicted RBP25.08■■□□□ 1.61
LYSMD2-201ENST00000267838 CCNL1Q9UK58 526 aaPredicted RBP25.08■■□□□ 1.61
LYSMD2-201ENST00000267838 EYA2O00167 538 aa25.08■■□□□ 1.6
LYSMD2-201ENST00000267838 CIAO1O76071 339 aa25.08■■□□□ 1.6
LYSMD2-201ENST00000267838 IL15P40933 162 aaPredicted RBP25.08■■□□□ 1.6
LYSMD2-201ENST00000267838 SLC4A3P48751 1232 aa25.08■■□□□ 1.6
LYSMD2-201ENST00000267838 REC8O95072 547 aa25.07■■□□□ 1.6
LYSMD2-201ENST00000267838 PARP10Q53GL7 1025 aa25.07■■□□□ 1.6
LYSMD2-201ENST00000267838 USP26Q9BXU7 913 aa25.07■■□□□ 1.6
LYSMD2-201ENST00000267838 CTSWP56202 376 aa25.06■■□□□ 1.6
LYSMD2-201ENST00000267838 SUSD4Q5VX71 490 aa25.06■■□□□ 1.6
LYSMD2-201ENST00000267838 ESYT1Q9BSJ8 1104 aa25.06■■□□□ 1.6
LYSMD2-201ENST00000267838 BCL11BQ9C0K0 894 aaPredicted RBP25.06■■□□□ 1.6
LYSMD2-201ENST00000267838 ZNF652Q9Y2D9 606 aa25.06■■□□□ 1.6
LYSMD2-201ENST00000267838 BRWD3Q6RI45 1802 aa25.06■■□□□ 1.6
LYSMD2-201ENST00000267838 PDE8AO60658 829 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms