RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 LUC7L2Q9Y383 392 aaKnown RBP12.75□□□□□ -0.37
CHFR-201ENST00000266880 SH3BP5O60239 455 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 SETDB1Q15047 1291 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 SELENOOQ9BVL4 669 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 SYNCQ9H7C4 482 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 GIMAP6Q6P9H5 292 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 SRGAP3O43295 1099 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 PPFIBP2Q8ND30 876 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 PPP2R1AP30153 589 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 HPDP32754 393 aaPredicted RBP12.74□□□□□ -0.37
CHFR-201ENST00000266880 N4BP3O15049 544 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 GSTA5Q7RTV2 222 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 CCDC82Q8N4S0 544 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
CHFR-201ENST00000266880 SSRP1Q08945 709 aaKnown RBP12.74□□□□□ -0.37
CHFR-201ENST00000266880 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 TBC1D5Q92609 795 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 RABEP2Q9H5N1 569 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 LRP2BPQ9P2M1 347 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 CFAP157Q5JU67 520 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 IFI16Q16666 785 aaKnown RBP12.74□□□□□ -0.37
CHFR-201ENST00000266880 CACNA2D3Q8IZS8 1091 aa12.74□□□□□ -0.37
CHFR-201ENST00000266880 TPX2Q9ULW0 747 aaKnown RBP12.74□□□□□ -0.37
CHFR-201ENST00000266880 PPARDQ03181 441 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 CETN1Q12798 172 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 CCDC85AQ96PX6 553 aaPredicted RBP12.73□□□□□ -0.37
CHFR-201ENST00000266880 VIMP08670 466 aaKnown RBP12.73□□□□□ -0.37
CHFR-201ENST00000266880 CEP128Q6ZU80 1094 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 SMC1BQ8NDV3 1235 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 WASHC2AQ641Q2 1341 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 KIF5AQ12840 1032 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 ANO6Q4KMQ2 910 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 MORC4Q8TE76 937 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 BAG4O95429 457 aaKnown RBP12.73□□□□□ -0.37
CHFR-201ENST00000266880 FMNL3Q8IVF7 1028 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 ZSCAN29Q8IWY8 852 aaPredicted RBP12.73□□□□□ -0.37
CHFR-201ENST00000266880 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHFR-201ENST00000266880 OGFRQ9NZT2 677 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 TSNAXIP1Q2TAA8 658 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 SYCP3Q8IZU3 236 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 KARSQ15046 597 aaKnown RBP12.73□□□□□ -0.37
CHFR-201ENST00000266880 RBBP5Q15291 538 aaKnown RBP12.73□□□□□ -0.37
CHFR-201ENST00000266880 GAS2L2Q8NHY3 880 aa12.73□□□□□ -0.37
CHFR-201ENST00000266880 UBASH3AP57075 661 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
CHFR-201ENST00000266880 NUF2Q9BZD4 464 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 UVSSAQ2YD98 709 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 B4GALNT4Q76KP1 1039 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 AFAP1L1Q8TED9 768 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 ARID5AQ03989 594 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 HDXQ7Z353 690 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 ARMCX6Q7L4S7 300 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 UBLCP1Q8WVY7 318 aaPredicted RBP12.72□□□□□ -0.37
CHFR-201ENST00000266880 FERMT1Q9BQL6 677 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 MINDY4BA8MYZ0 360 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
CHFR-201ENST00000266880 IFT74Q96LB3 600 aa12.72□□□□□ -0.37
CHFR-201ENST00000266880 WDR78Q5VTH9 848 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 VCX3BQ9H321 246 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 A0A087WZG4 1122 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 GJB2P29033 226 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 TRIM47Q96LD4 638 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 ATF7IPQ6VMQ6 1270 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 LRRC43Q8N309 656 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 RAB11FIP4Q86YS3 637 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 ODF2LQ9ULJ1 636 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 HGSO14964 777 aaPredicted RBP12.71□□□□□ -0.37
CHFR-201ENST00000266880 GMNNO75496 209 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 SYT1P21579 422 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.37
CHFR-201ENST00000266880 INPP5BP32019 993 aa12.71□□□□□ -0.38
CHFR-201ENST00000266880 PIP4K2BP78356 416 aa12.71□□□□□ -0.38
CHFR-201ENST00000266880 GBP5Q96PP8 586 aa12.71□□□□□ -0.38
CHFR-201ENST00000266880 RAB11FIP3O75154 756 aa12.71□□□□□ -0.38
CHFR-201ENST00000266880 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.38
CHFR-201ENST00000266880 SLC12A7Q9Y666 1083 aa12.71□□□□□ -0.38
CHFR-201ENST00000266880 SATB1Q01826 763 aa12.71□□□□□ -0.38
CHFR-201ENST00000266880 TLDC2A0PJX2 215 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 TRIM7Q9C029 511 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 EXOC1Q9NV70 894 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 PRR16Q569H4 304 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 STX6O43752 255 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 IDEP14735 1019 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 MX1P20591 662 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 CLCN1P35523 988 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 TXNDC9O14530 226 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 NDC80O14777 642 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 PSMD6Q15008 389 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 GSDMBQ8TAX9 411 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 ZNF131P52739 623 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 UBE2HP62256 183 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 ZNF354CQ86Y25 554 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 PFDN4Q9NQP4 134 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 CNPY2Q9Y2B0 182 aa12.7□□□□□ -0.38
CHFR-201ENST00000266880 CCDC194A0A1B0GVG4 234 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms