RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 CCDC102BQ68D86 513 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 RPGRIP1Q96KN7 1286 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 RBBP5Q15291 538 aaKnown RBP6.23□□□□□ -1.41
XRN1-201ENST00000264951 PPP2R5EQ16537 467 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 TRIM35Q9UPQ4 493 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 PHLDB3Q6NSJ2 640 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 RUFY4Q6ZNE9 571 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 NAA25Q14CX7 972 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 LTV1Q96GA3 475 aaPredicted RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 CEP126Q9P2H0 1117 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 MTUS1Q9ULD2 1270 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 SSBP05455 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
XRN1-201ENST00000264951 SLC8A1P32418 973 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 BICDL1Q6ZP65 573 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 HVCN1Q96D96 273 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 SNX16P57768 344 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 INTS8Q75QN2 995 aaKnown RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 MICALL1Q8N3F8 863 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 KCNG4Q8TDN1 519 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 CNNM3Q8NE01 707 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 PRPF31Q8WWY3 499 aaKnown RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 SENP3Q9H4L4 574 aaPredicted RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 TMOD2Q9NZR1 351 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 NBPF7P0C2Y1 421 aaPredicted RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 MTIF2P46199 727 aaKnown RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 TWISTNBQ3B726 338 aaPredicted RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 CUL5Q93034 780 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 KIF1BPQ96EK5 621 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 GPRASP1Q5JY77 1395 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 CCDC194A0A1B0GVG4 234 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 IQCA1Q86XH1 822 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 ZC3H15Q8WU90 426 aaKnown RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 PANK1Q8TE04 598 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 HAUS2Q9NVX0 235 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 ANKRD30BQ9BXX2 1392 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 DCAF8L1A6NGE4 600 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 PPFIA4O75335 1185 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 CCDC82Q8N4S0 544 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 JAKMIP1Q96N16 626 aaKnown RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 SEPT10Q9P0V9 454 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 TXNDC16Q9P2K2 825 aa6.22□□□□□ -1.41
XRN1-201ENST00000264951 PPP1R1BQ9UD71 204 aaPredicted RBP6.22□□□□□ -1.41
XRN1-201ENST00000264951 ACTN4O43707 911 aaKnown RBP6.21□□□□□ -1.41
XRN1-201ENST00000264951 PCK1P35558 622 aa6.21□□□□□ -1.41
XRN1-201ENST00000264951 CEBPZQ03701 1054 aaKnown RBP6.21□□□□□ -1.41
XRN1-201ENST00000264951 CALCOCO2Q13137 446 aa6.21□□□□□ -1.41
XRN1-201ENST00000264951 ZKSCAN5Q9Y2L8 839 aa6.21□□□□□ -1.41
XRN1-201ENST00000264951 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.41
XRN1-201ENST00000264951 FOSBP53539 338 aa6.21□□□□□ -1.41
XRN1-201ENST00000264951 TRIM14Q14142 442 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 ALDH1L2Q3SY69 923 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 AP1ARQ63HQ0 302 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 MYCBPQ99417 103 aaPredicted RBP6.21□□□□□ -1.42
XRN1-201ENST00000264951 ANKRD24Q8TF21 1146 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 ODF2LQ9ULJ1 636 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 TRAK1Q9UPV9 953 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 MACROD2A1Z1Q3 448 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 AMOTQ4VCS5 1084 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 MIER3Q7Z3K6 550 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 KLHL34Q8N239 644 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 CNNM1Q9NRU3 951 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 STX6O43752 255 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 MATR3P43243 847 aaKnown RBP eCLIP6.21□□□□□ -1.423e-9■■■■■ 33.3
XRN1-201ENST00000264951 DZIP1Q86YF9 867 aaKnown RBP6.21□□□□□ -1.42
XRN1-201ENST00000264951 CNGA4Q8IV77 575 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 TSPYL2Q9H2G4 693 aaPredicted RBP6.21□□□□□ -1.42
XRN1-201ENST00000264951 RBM26Q5T8P6 1007 aaKnown RBP6.21□□□□□ -1.42
XRN1-201ENST00000264951 TCP11L2Q8N4U5 519 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 CCDC26Q8TAB7 109 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 BICDL2A1A5D9 508 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 ADCY5O95622 1261 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 USP5P45974 858 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 CCDC62Q6P9F0 684 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 TMTC2Q8N394 836 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 MPHOSPH8Q99549 860 aa6.21□□□□□ -1.42
XRN1-201ENST00000264951 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.21□□□□□ -1.42
XRN1-201ENST00000264951 C11orf95C9JLR9 678 aaPredicted RBP6.2□□□□□ -1.42
XRN1-201ENST00000264951 EVI5O60447 810 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 ATP6V1AP38606 617 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 FOXD1Q16676 465 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.2□□□□□ -1.42
XRN1-201ENST00000264951 MTMR3Q13615 1198 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 AIDAQ96BJ3 306 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 MAP2K2P36507 400 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 NLRP5P59047 1200 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 MCM6Q14566 821 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 RILPL1Q5EBL4 403 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 SRGAP1Q7Z6B7 1085 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 ZNF692Q9BU19 519 aaPredicted RBP6.2□□□□□ -1.42
XRN1-201ENST00000264951 INPP5BP32019 993 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 SLMAPQ14BN4 828 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 NBPF8Q3BBV2 869 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 VWA3BQ502W6 1294 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 TSKSQ9UJT2 592 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.2□□□□□ -1.42
XRN1-201ENST00000264951 PSMA7O14818 248 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 GAS8O95995 478 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 NOP2P46087 812 aaKnown RBP6.2□□□□□ -1.42
XRN1-201ENST00000264951 PSME1Q06323 249 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 LRSAM1Q6UWE0 723 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms