RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 TULP4Q9NRJ4 1543 aa19.45■□□□□ 0.7
VSX2-201ENST00000261980 IL13P35225 146 aa19.45■□□□□ 0.7
VSX2-201ENST00000261980 LARP1Q6PKG0 1096 aaKnown RBP19.45■□□□□ 0.7
VSX2-201ENST00000261980 NFATC2IPQ8NCF5 419 aa19.45■□□□□ 0.7
VSX2-201ENST00000261980 SNW1Q13573 536 aaKnown RBP19.44■□□□□ 0.7
VSX2-201ENST00000261980 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.44■□□□□ 0.7
VSX2-201ENST00000261980 TPCN1Q9ULQ1 816 aa19.44■□□□□ 0.7
VSX2-201ENST00000261980 CCAR2Q8N163 923 aaKnown RBP19.44■□□□□ 0.7
VSX2-201ENST00000261980 CCDC191Q8NCU4 936 aa19.44■□□□□ 0.7
VSX2-201ENST00000261980 KIF1BPQ96EK5 621 aa19.44■□□□□ 0.7
VSX2-201ENST00000261980 SGSM2O43147 1006 aa19.44■□□□□ 0.7
VSX2-201ENST00000261980 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
VSX2-201ENST00000261980 QRICH2Q9H0J4 1663 aa19.43■□□□□ 0.7
VSX2-201ENST00000261980 GNL2Q13823 731 aaKnown RBP19.43■□□□□ 0.7
VSX2-201ENST00000261980 NYAP1Q6ZVC0 841 aa19.43■□□□□ 0.7
VSX2-201ENST00000261980 RBM33Q96EV2 1170 aaKnown RBP19.43■□□□□ 0.7
VSX2-201ENST00000261980 PGBD1Q96JS3 809 aa19.43■□□□□ 0.7
VSX2-201ENST00000261980 LSG1Q9H089 658 aaKnown RBP19.43■□□□□ 0.7
VSX2-201ENST00000261980 SALL3Q9BXA9 1300 aa19.42■□□□□ 0.7
VSX2-201ENST00000261980 CCZ1BP86790 482 aa19.42■□□□□ 0.7
VSX2-201ENST00000261980 CCZ1P86791 482 aaPredicted RBP19.42■□□□□ 0.7
VSX2-201ENST00000261980 DNAI1Q9UI46 699 aa19.42■□□□□ 0.7
VSX2-201ENST00000261980 TDRD7Q8NHU6 1098 aaKnown RBP19.41■□□□□ 0.7
VSX2-201ENST00000261980 LEO1Q8WVC0 666 aaPredicted RBP19.41■□□□□ 0.7
VSX2-201ENST00000261980 YTHDC2Q9H6S0 1430 aaKnown RBP19.41■□□□□ 0.7
VSX2-201ENST00000261980 LMOD3Q0VAK6 560 aa19.41■□□□□ 0.7
VSX2-201ENST00000261980 TAF6LQ9Y6J9 622 aa19.41■□□□□ 0.7
VSX2-201ENST00000261980 CCDC171Q6TFL3 1326 aa19.41■□□□□ 0.7
VSX2-201ENST00000261980 HTATSF1O43719 755 aaKnown RBP19.41■□□□□ 0.7
VSX2-201ENST00000261980 RAB11FIP3O75154 756 aa19.41■□□□□ 0.7
VSX2-201ENST00000261980 GOLGA8FQ08AF8 430 aa19.41■□□□□ 0.7
VSX2-201ENST00000261980 GOLGA8DPQ0D2H9 430 aa19.41■□□□□ 0.7
VSX2-201ENST00000261980 ISM2Q6H9L7 571 aa19.41■□□□□ 0.7
VSX2-201ENST00000261980 CYP46A1Q9Y6A2 500 aa19.41■□□□□ 0.7
VSX2-201ENST00000261980 JAK2O60674 1132 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 SMC2O95347 1197 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 TMCO3Q6UWJ1 677 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 AOPEPQ8N6M6 819 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 TSPYL4Q9UJ04 414 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 RIMS1Q86UR5 1692 aaKnown RBP19.4■□□□□ 0.7
VSX2-201ENST00000261980 NUTM2FA1L443 756 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 LMAN1P49257 510 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 OS9Q13438 667 aaPredicted RBP19.4■□□□□ 0.7
VSX2-201ENST00000261980 CLSTN2Q9H4D0 955 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 ZSWIM4Q9H7M6 989 aa19.4■□□□□ 0.7
VSX2-201ENST00000261980 PNPLA6Q8IY17 1366 aa19.39■□□□□ 0.7
VSX2-201ENST00000261980 URI1O94763 535 aaPredicted RBP19.39■□□□□ 0.7
VSX2-201ENST00000261980 TXNDC2Q86VQ3 553 aa19.39■□□□□ 0.7
VSX2-201ENST00000261980 UBXN4Q92575 508 aa19.39■□□□□ 0.7
VSX2-201ENST00000261980 ALKQ9UM73 1620 aa19.39■□□□□ 0.69
VSX2-201ENST00000261980 RASSF4Q9H2L5 321 aa19.39■□□□□ 0.69
VSX2-201ENST00000261980 OAS2P29728 719 aaKnown RBP19.38■□□□□ 0.69
VSX2-201ENST00000261980 MYO1CO00159 1063 aa19.38■□□□□ 0.69
VSX2-201ENST00000261980 BIN1O00499 593 aa19.38■□□□□ 0.69
VSX2-201ENST00000261980 ZSCAN26Q16670 478 aa19.38■□□□□ 0.69
VSX2-201ENST00000261980 TEX35Q5T0J7 233 aa19.38■□□□□ 0.69
VSX2-201ENST00000261980 FAM53CQ9NYF3 392 aa19.38■□□□□ 0.69
VSX2-201ENST00000261980 LTKP29376 864 aa19.38■□□□□ 0.69
VSX2-201ENST00000261980 E4F1Q66K89 784 aaPredicted RBP19.38■□□□□ 0.69
VSX2-201ENST00000261980 PTPRCP08575 1304 aa19.37■□□□□ 0.69
VSX2-201ENST00000261980 H2AFXP16104 143 aaPredicted RBP19.37■□□□□ 0.69
VSX2-201ENST00000261980 TMC6Q7Z403 805 aa19.37■□□□□ 0.69
VSX2-201ENST00000261980 MNS1Q8NEH6 495 aa19.37■□□□□ 0.69
VSX2-201ENST00000261980 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
VSX2-201ENST00000261980 LOC102724159A0A0B4J2E5 919 aa19.37■□□□□ 0.69
VSX2-201ENST00000261980 SASH3O75995 380 aa19.37■□□□□ 0.69
VSX2-201ENST00000261980 PWP2Q15269 919 aaKnown RBP19.37■□□□□ 0.69
VSX2-201ENST00000261980 CARD6Q9BX69 1037 aa19.37■□□□□ 0.69
VSX2-201ENST00000261980 METP08581 1390 aa19.37■□□□□ 0.69
VSX2-201ENST00000261980 LRRC2Q9BYS8 371 aa19.36■□□□□ 0.69
VSX2-201ENST00000261980 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.36■□□□□ 0.69
VSX2-201ENST00000261980 PPP1R13BQ96KQ4 1090 aa19.36■□□□□ 0.69
VSX2-201ENST00000261980 DDX19AQ9NUU7 478 aaKnown RBP19.36■□□□□ 0.69
VSX2-201ENST00000261980 ARHGEF28Q8N1W1 1705 aaKnown RBP19.36■□□□□ 0.69
VSX2-201ENST00000261980 ATP8B2P98198 1209 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 GUCY1B3Q02153 619 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 SLC20A2Q08357 652 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 IQCB1Q15051 598 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 PPP1R42Q7Z4L9 355 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 MYO3AQ8NEV4 1616 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 CHL1O00533 1208 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 SRGAP3O43295 1099 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
VSX2-201ENST00000261980 CNTROBQ8N137 903 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 STK31Q9BXU1 1019 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 PLEKHA4Q9H4M7 779 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.35■□□□□ 0.69
VSX2-201ENST00000261980 PI4K2BQ8TCG2 481 aa19.35■□□□□ 0.69
VSX2-201ENST00000261980 PTPRMP28827 1452 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 NPHP3Q7Z494 1330 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 GPATCH11Q8N954 259 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 FAM227BQ96M60 508 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 SIL1Q9H173 461 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 GNAI3P08754 354 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 UBTFL1P0CB47 393 aaPredicted RBP19.34■□□□□ 0.69
VSX2-201ENST00000261980 FLIIQ13045 1269 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 HSP90AA4PQ58FG1 418 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 RGS22Q8NE09 1264 aa19.34■□□□□ 0.69
VSX2-201ENST00000261980 KIAA0232Q92628 1395 aa19.33■□□□□ 0.69
VSX2-201ENST00000261980 TMEM2Q9UHN6 1383 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms