RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 COPS6Q7L5N1 327 aa27.14■■□□□ 1.94
MCF2L-201ENST00000261963 EAF2Q96CJ1 260 aaPredicted RBP27.14■■□□□ 1.94
MCF2L-201ENST00000261963 STRCP1A6NGW2 1772 aa27.14■■□□□ 1.93
MCF2L-201ENST00000261963 CSB-PGBD3P0DP91 1061 aa27.14■■□□□ 1.93
MCF2L-201ENST00000261963 RBM27Q9P2N5 1060 aaKnown RBP27.13■■□□□ 1.93
MCF2L-201ENST00000261963 MRC1P22897 1456 aa27.13■■□□□ 1.93
MCF2L-201ENST00000261963 TNS3Q68CZ2 1445 aa27.12■■□□□ 1.93
MCF2L-201ENST00000261963 PTH1RQ03431 593 aa27.12■■□□□ 1.93
MCF2L-201ENST00000261963 G3BP1Q13283 466 aaKnown RBP eCLIP27.12■■□□□ 1.93
MCF2L-201ENST00000261963 GCKRQ14397 625 aa27.12■■□□□ 1.93
MCF2L-201ENST00000261963 METTL22Q9BUU2 404 aaPredicted RBP27.12■■□□□ 1.93
MCF2L-201ENST00000261963 USP16Q9Y5T5 823 aa27.12■■□□□ 1.93
MCF2L-201ENST00000261963 EVI5LQ96CN4 794 aa27.11■■□□□ 1.93
MCF2L-201ENST00000261963 EPHA10Q5JZY3 1008 aa27.11■■□□□ 1.93
MCF2L-201ENST00000261963 RUFY2Q8WXA3 655 aa27.11■■□□□ 1.93
MCF2L-201ENST00000261963 DCAF5Q96JK2 942 aa27.11■■□□□ 1.93
MCF2L-201ENST00000261963 NEXNQ0ZGT2 675 aa27.1■■□□□ 1.93
MCF2L-201ENST00000261963 MYD88Q99836 296 aa27.1■■□□□ 1.93
MCF2L-201ENST00000261963 CCDC94Q9BW85 323 aaPredicted RBP27.1■■□□□ 1.93
MCF2L-201ENST00000261963 NSFL1CQ9UNZ2 370 aaKnown RBP27.1■■□□□ 1.93
MCF2L-201ENST00000261963 AK2P54819 239 aa27.1■■□□□ 1.93
MCF2L-201ENST00000261963 CCDC8Q9H0W5 538 aaPredicted RBP27.1■■□□□ 1.93
MCF2L-201ENST00000261963 TLR7Q9NYK1 1049 aaKnown RBP27.1■■□□□ 1.93
MCF2L-201ENST00000261963 SNRPA1P09661 255 aaKnown RBP27.09■■□□□ 1.93
MCF2L-201ENST00000261963 KLHDC4Q8TBB5 520 aa27.09■■□□□ 1.93
MCF2L-201ENST00000261963 PLEKHG2Q9H7P9 1386 aa27.09■■□□□ 1.93
MCF2L-201ENST00000261963 RUFY3Q7L099 469 aa27.09■■□□□ 1.93
MCF2L-201ENST00000261963 SIL1Q9H173 461 aa27.09■■□□□ 1.93
MCF2L-201ENST00000261963 PIP4K2AP48426 406 aaPredicted RBP27.08■■□□□ 1.93
MCF2L-201ENST00000261963 SYCE3A1L190 88 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 ANKRD13DQ6ZTN6 518 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 KCNB2Q92953 911 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 SPATA31A3Q5VYP0 1347 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 CPA1P15085 419 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 CADPS2Q86UW7 1296 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 TTC5Q8N0Z6 440 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 PRDM10Q9NQV6 1147 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 TMEM63CQ9P1W3 806 aa27.07■■□□□ 1.92
MCF2L-201ENST00000261963 RPAP1Q9BWH6 1393 aaPredicted RBP27.06■■□□□ 1.92
MCF2L-201ENST00000261963 UTP14CQ5TAP6 766 aaKnown RBP27.06■■□□□ 1.92
MCF2L-201ENST00000261963 LIMCH1Q9UPQ0 1083 aa27.06■■□□□ 1.92
MCF2L-201ENST00000261963 PKD1L3Q7Z443 1732 aa27.05■■□□□ 1.92
MCF2L-201ENST00000261963 CASTP20810 708 aaKnown RBP27.05■■□□□ 1.92
MCF2L-201ENST00000261963 PRPF40BQ6NWY9 871 aaKnown RBP27.05■■□□□ 1.92
MCF2L-201ENST00000261963 FMNL2Q96PY5 1086 aa27.05■■□□□ 1.92
MCF2L-201ENST00000261963 LARP6Q9BRS8 491 aaKnown RBP27.05■■□□□ 1.92
MCF2L-201ENST00000261963 ADCK5Q3MIX3 580 aa27.05■■□□□ 1.92
MCF2L-201ENST00000261963 FAM227BQ96M60 508 aa27.05■■□□□ 1.92
MCF2L-201ENST00000261963 CPDO75976 1380 aa27.04■■□□□ 1.92
MCF2L-201ENST00000261963 KIAA2012Q0VF49 1180 aa27.04■■□□□ 1.92
MCF2L-201ENST00000261963 CCDC171Q6TFL3 1326 aa27.04■■□□□ 1.92
MCF2L-201ENST00000261963 WDR33Q9C0J8 1336 aaKnown RBP27.04■■□□□ 1.92
MCF2L-201ENST00000261963 DMTNQ08495 405 aa27.04■■□□□ 1.92
MCF2L-201ENST00000261963 NMIQ13287 307 aaPredicted RBP27.03■■□□□ 1.92
MCF2L-201ENST00000261963 NECTIN1Q15223 517 aa27.03■■□□□ 1.92
MCF2L-201ENST00000261963 JARID2Q92833 1246 aaPredicted RBP27.03■■□□□ 1.92
MCF2L-201ENST00000261963 MBD3O95983 291 aa27.02■■□□□ 1.92
MCF2L-201ENST00000261963 PTMAP06454 111 aaKnown RBP27.02■■□□□ 1.92
MCF2L-201ENST00000261963 MYRIPQ8NFW9 859 aa27.02■■□□□ 1.92
MCF2L-201ENST00000261963 GLI3P10071 1580 aa27.02■■□□□ 1.92
MCF2L-201ENST00000261963 RFX5P48382 616 aaPredicted RBP27.02■■□□□ 1.92
MCF2L-201ENST00000261963 BOLA2Q9H3K6 86 aa27.02■■□□□ 1.92
MCF2L-201ENST00000261963 SNRKQ9NRH2 765 aa27.02■■□□□ 1.92
MCF2L-201ENST00000261963 LARGE1O95461 756 aa27.01■■□□□ 1.92
MCF2L-201ENST00000261963 JAKMIP1Q96N16 626 aaKnown RBP27.01■■□□□ 1.92
MCF2L-201ENST00000261963 TM6SF1Q9BZW5 370 aa27.01■■□□□ 1.92
MCF2L-201ENST00000261963 COPRSQ9NQ92 184 aa27.01■■□□□ 1.92
MCF2L-201ENST00000261963 ZHX1Q9UKY1 873 aaPredicted RBP27.01■■□□□ 1.92
MCF2L-201ENST00000261963 CABP4P57796 275 aa27.01■■□□□ 1.91
MCF2L-201ENST00000261963 ZSWIM6Q9HCJ5 1215 aa27.01■■□□□ 1.91
MCF2L-201ENST00000261963 HIP1O00291 1037 aa27■■□□□ 1.91
MCF2L-201ENST00000261963 RBM8AQ9Y5S9 174 aaKnown RBP27■■□□□ 1.91
MCF2L-201ENST00000261963 FOXD4L6Q3SYB3 417 aaPredicted RBP26.99■■□□□ 1.91
MCF2L-201ENST00000261963 VPS53Q5VIR6 699 aa26.99■■□□□ 1.91
MCF2L-201ENST00000261963 FOXD4L3Q6VB84 417 aaPredicted RBP26.99■■□□□ 1.91
MCF2L-201ENST00000261963 RNF214Q8ND24 703 aa26.99■■□□□ 1.91
MCF2L-201ENST00000261963 MAP4K1Q92918 833 aa26.99■■□□□ 1.91
MCF2L-201ENST00000261963 PTPN12Q05209 780 aaKnown RBP26.99■■□□□ 1.91
MCF2L-201ENST00000261963 RABL6Q3YEC7 729 aaPredicted RBP26.99■■□□□ 1.91
MCF2L-201ENST00000261963 DNTTIP2Q5QJE6 756 aaKnown RBP26.99■■□□□ 1.91
MCF2L-201ENST00000261963 A0A0D9SFI3 127 aa26.98■■□□□ 1.91
MCF2L-201ENST00000261963 PDRG1Q9NUG6 133 aa26.98■■□□□ 1.91
MCF2L-201ENST00000261963 COL15A1P39059 1388 aa26.98■■□□□ 1.91
MCF2L-201ENST00000261963 CREB3L3Q68CJ9 461 aa26.98■■□□□ 1.91
MCF2L-201ENST00000261963 UBE3BQ7Z3V4 1068 aa26.98■■□□□ 1.91
MCF2L-201ENST00000261963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.98■■□□□ 1.91
MCF2L-201ENST00000261963 GDPD2Q9HCC8 539 aa26.97■■□□□ 1.91
MCF2L-201ENST00000261963 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.97■■□□□ 1.91
MCF2L-201ENST00000261963 ATP5J2-PTCD1G3V325 749 aa26.97■■□□□ 1.91
MCF2L-201ENST00000261963 PTCD1O75127 700 aaKnown RBP26.97■■□□□ 1.91
MCF2L-201ENST00000261963 FSD1Q9BTV5 496 aa26.97■■□□□ 1.91
MCF2L-201ENST00000261963 CYP46A1Q9Y6A2 500 aa26.97■■□□□ 1.91
MCF2L-201ENST00000261963 ZSCAN20P17040 1043 aaPredicted RBP26.96■■□□□ 1.91
MCF2L-201ENST00000261963 CASP7P55210 303 aa26.96■■□□□ 1.91
MCF2L-201ENST00000261963 PRIMPOLQ96LW4 560 aa26.96■■□□□ 1.91
MCF2L-201ENST00000261963 MED23Q9ULK4 1368 aa26.96■■□□□ 1.91
MCF2L-201ENST00000261963 SYT1P21579 422 aa26.96■■□□□ 1.91
MCF2L-201ENST00000261963 GADD45BO75293 160 aaPredicted RBP26.95■■□□□ 1.9
MCF2L-201ENST00000261963 ZSCAN22P10073 491 aaPredicted RBP26.95■■□□□ 1.9
MCF2L-201ENST00000261963 DDX54Q8TDD1 881 aaKnown RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms