RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PROSER3Q2NL68 480 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 MPRIPQ6WCQ1 1025 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 DACT1Q9NYF0 836 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 TPCN1Q9ULQ1 816 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 MTMR6Q9Y217 621 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 PHF14O94880 888 aa15.52■□□□□ 0.08
SNX1-201ENST00000261889 LARP1BQ659C4 914 aaKnown RBP15.52■□□□□ 0.08
SNX1-201ENST00000261889 USP31Q70CQ4 1352 aa15.52■□□□□ 0.08
SNX1-201ENST00000261889 JAK2O60674 1132 aa15.52■□□□□ 0.07
SNX1-201ENST00000261889 CCDC94Q9BW85 323 aaPredicted RBP15.52■□□□□ 0.07
SNX1-201ENST00000261889 GUCY1B3Q02153 619 aa15.52■□□□□ 0.07
SNX1-201ENST00000261889 CDK12Q9NYV4 1490 aaPredicted RBP15.51■□□□□ 0.07
SNX1-201ENST00000261889 RAB11FIP3O75154 756 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 UBE2HP62256 183 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 PTPN21Q16825 1174 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 ANO6Q4KMQ2 910 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 AACSQ86V21 672 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 LRRC59Q96AG4 307 aaKnown RBP15.51■□□□□ 0.07
SNX1-201ENST00000261889 TRIM5Q9C035 493 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 DNAJC25Q9H1X3 360 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 TRMT1Q9NXH9 659 aaKnown RBP15.51■□□□□ 0.07
SNX1-201ENST00000261889 RAD50Q92878 1312 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 MCM2P49736 904 aa15.51■□□□□ 0.07
SNX1-201ENST00000261889 GOLGA6L4A6NEF3 574 aa15.5■□□□□ 0.07
SNX1-201ENST00000261889 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
SNX1-201ENST00000261889 HYPKQ9NX55 129 aa15.5■□□□□ 0.07
SNX1-201ENST00000261889 CCDC129Q6ZRS4 1044 aa15.5■□□□□ 0.07
SNX1-201ENST00000261889 PDCL2Q8N4E4 241 aa15.5■□□□□ 0.07
SNX1-201ENST00000261889 TTC14Q96N46 770 aa15.5■□□□□ 0.07
SNX1-201ENST00000261889 PEAK1Q9H792 1746 aa15.5■□□□□ 0.07
SNX1-201ENST00000261889 ZSCAN20P17040 1043 aaPredicted RBP15.5■□□□□ 0.07
SNX1-201ENST00000261889 RAB11FIP4Q86YS3 637 aa15.5■□□□□ 0.07
SNX1-201ENST00000261889 NFAT5O94916 1531 aa15.5■□□□□ 0.07
SNX1-201ENST00000261889 COL16A1Q07092 1604 aaPredicted RBP15.49■□□□□ 0.07
SNX1-201ENST00000261889 GNAT3A8MTJ3 354 aa15.49■□□□□ 0.07
SNX1-201ENST00000261889 ZBTB22O15209 634 aa15.49■□□□□ 0.07
SNX1-201ENST00000261889 LARP1Q6PKG0 1096 aaKnown RBP15.49■□□□□ 0.07
SNX1-201ENST00000261889 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
SNX1-201ENST00000261889 BICD2Q8TD16 824 aa15.49■□□□□ 0.07
SNX1-201ENST00000261889 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
SNX1-201ENST00000261889 C9orf78Q9NZ63 289 aaPredicted RBP15.49■□□□□ 0.07
SNX1-201ENST00000261889 FILIP1Q7Z7B0 1213 aa15.48■□□□□ 0.07
SNX1-201ENST00000261889 RBM8AQ9Y5S9 174 aaKnown RBP15.48■□□□□ 0.07
SNX1-201ENST00000261889 CHST3Q7LGC8 479 aa15.48■□□□□ 0.07
SNX1-201ENST00000261889 RGPD1P0DJD0 1748 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 USP27XA6NNY8 438 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 NR1I2O75469 434 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 IFIT2P09913 472 aaKnown RBP15.47■□□□□ 0.07
SNX1-201ENST00000261889 NMIQ13287 307 aaPredicted RBP15.47■□□□□ 0.07
SNX1-201ENST00000261889 SEC62Q99442 399 aaKnown RBP15.47■□□□□ 0.07
SNX1-201ENST00000261889 A0A0D9SFI3 127 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 MCM5P33992 734 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 HAP1P54257 671 aaPredicted RBP15.47■□□□□ 0.07
SNX1-201ENST00000261889 TYRO3Q06418 890 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 CADPS2Q86UW7 1296 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 LTN1O94822 1766 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 COL18A1P39060 1754 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 ZNF589Q86UQ0 364 aaPredicted RBP15.47■□□□□ 0.07
SNX1-201ENST00000261889 KIAA1524Q8TCG1 905 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 TNMDQ9H2S6 317 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.47■□□□□ 0.07
SNX1-201ENST00000261889 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
SNX1-201ENST00000261889 ANAPC15P60006 121 aa15.46■□□□□ 0.07
SNX1-201ENST00000261889 ABTB2Q8N961 1025 aa15.46■□□□□ 0.07
SNX1-201ENST00000261889 NUP62CLQ9H1M0 184 aa15.46■□□□□ 0.07
SNX1-201ENST00000261889 USP16Q9Y5T5 823 aa15.46■□□□□ 0.07
SNX1-201ENST00000261889 CCDC144BQ3MJ40 725 aa15.46■□□□□ 0.07
SNX1-201ENST00000261889 CCDC144CPQ8IYA2 1237 aa15.46■□□□□ 0.07
SNX1-201ENST00000261889 CBX8Q9HC52 389 aa15.46■□□□□ 0.07
SNX1-201ENST00000261889 MRVI1Q9Y6F6 885 aa15.46■□□□□ 0.07
SNX1-201ENST00000261889 SBNO1A3KN83 1393 aa15.46■□□□□ 0.06
SNX1-201ENST00000261889 HSP90B1P14625 803 aaKnown RBP15.45■□□□□ 0.06
SNX1-201ENST00000261889 ISM2Q6H9L7 571 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 FMNL2Q96PY5 1086 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 A0A0G2JLW4 131 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 MYL6BP14649 208 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 SSH3Q8TE77 659 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 FSD1Q9BTV5 496 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 ST7Q9NRC1 585 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 CAMTA1Q9Y6Y1 1673 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 KIF1BPQ96EK5 621 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 MAP3K2Q9Y2U5 619 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 TTC21AQ8NDW8 1320 aa15.45■□□□□ 0.06
SNX1-201ENST00000261889 ABCC6O95255 1503 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 AATKQ6ZMQ8 1374 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 CCDC192P0DO97 292 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 TERF1P54274 439 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 CLASRPQ8N2M8 674 aaKnown RBP15.44■□□□□ 0.06
SNX1-201ENST00000261889 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 CHAF1AQ13111 956 aaPredicted RBP15.44■□□□□ 0.06
SNX1-201ENST00000261889 STK11IPQ8N1F8 1099 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 SPATA32Q96LK8 384 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 FUCA2Q9BTY2 467 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 CREB3L3Q68CJ9 461 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 DNAAF4Q8WXU2 420 aa15.44■□□□□ 0.06
SNX1-201ENST00000261889 DNAJC2Q99543 621 aaKnown RBP15.44■□□□□ 0.06
SNX1-201ENST00000261889 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
SNX1-201ENST00000261889 FGD1P98174 961 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms