RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 PPP1R42Q7Z4L9 355 aa21.74■■□□□ 1.07
SSB-201ENST00000260956 COL23A1Q86Y22 540 aaPredicted RBP21.74■■□□□ 1.07
SSB-201ENST00000260956 USP26Q9BXU7 913 aa21.74■■□□□ 1.07
SSB-201ENST00000260956 USP16Q9Y5T5 823 aa21.74■■□□□ 1.07
SSB-201ENST00000260956 GNPATO15228 680 aa21.73■■□□□ 1.07
SSB-201ENST00000260956 EIF5BO60841 1220 aaKnown RBP21.73■■□□□ 1.07
SSB-201ENST00000260956 CD2BP2O95400 341 aaKnown RBP21.73■■□□□ 1.07
SSB-201ENST00000260956 AK7Q96M32 723 aa21.73■■□□□ 1.07
SSB-201ENST00000260956 HYPKQ9NX55 129 aa21.73■■□□□ 1.07
SSB-201ENST00000260956 CNTNAP4Q9C0A0 1308 aa21.72■■□□□ 1.07
SSB-201ENST00000260956 CICQ96RK0 1608 aaPredicted RBP21.72■■□□□ 1.07
SSB-201ENST00000260956 PHF14O94880 888 aa21.72■■□□□ 1.07
SSB-201ENST00000260956 MX1P20591 662 aa21.72■■□□□ 1.07
SSB-201ENST00000260956 RC3H1Q5TC82 1133 aaKnown RBP21.72■■□□□ 1.07
SSB-201ENST00000260956 MAP3K2Q9Y2U5 619 aa21.72■■□□□ 1.07
SSB-201ENST00000260956 CASZ1Q86V15 1759 aa21.71■■□□□ 1.07
SSB-201ENST00000260956 ARFGEF2Q9Y6D5 1785 aa21.71■■□□□ 1.07
SSB-201ENST00000260956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.71■■□□□ 1.07
SSB-201ENST00000260956 HSCBQ8IWL3 235 aa21.71■■□□□ 1.07
SSB-201ENST00000260956 RAB11FIP3O75154 756 aa21.7■■□□□ 1.06
SSB-201ENST00000260956 ZBTB7AO95365 584 aa21.7■■□□□ 1.06
SSB-201ENST00000260956 ZBTB1Q9Y2K1 713 aa21.7■■□□□ 1.06
SSB-201ENST00000260956 GOLGB1Q14789 3259 aaKnown RBP21.7■■□□□ 1.06
SSB-201ENST00000260956 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
SSB-201ENST00000260956 A1BGP04217 495 aa21.69■■□□□ 1.06
SSB-201ENST00000260956 SNRPA1P09661 255 aaKnown RBP21.69■■□□□ 1.06
SSB-201ENST00000260956 PIP4K2AP48426 406 aaPredicted RBP21.69■■□□□ 1.06
SSB-201ENST00000260956 CCDC87Q9NVE4 849 aa21.69■■□□□ 1.06
SSB-201ENST00000260956 USP42Q9H9J4 1324 aaKnown RBP21.69■■□□□ 1.06
SSB-201ENST00000260956 RPS6KA4O75676 772 aa21.68■■□□□ 1.06
SSB-201ENST00000260956 TSHZ3Q63HK5 1081 aa21.68■■□□□ 1.06
SSB-201ENST00000260956 AK9Q5TCS8 1911 aa21.68■■□□□ 1.06
SSB-201ENST00000260956 LINS1Q8NG48 757 aa21.67■■□□□ 1.06
SSB-201ENST00000260956 KAZALD1Q96I82 304 aa21.67■■□□□ 1.06
SSB-201ENST00000260956 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
SSB-201ENST00000260956 ARHGEF1Q92888 912 aaKnown RBP21.66■■□□□ 1.06
SSB-201ENST00000260956 ATF5Q9Y2D1 282 aaPredicted RBP21.66■■□□□ 1.06
SSB-201ENST00000260956 SRGAP3O43295 1099 aa21.66■■□□□ 1.06
SSB-201ENST00000260956 STARD3NLO95772 234 aa21.66■■□□□ 1.06
SSB-201ENST00000260956 SSFA2P28290 1259 aa21.66■■□□□ 1.06
SSB-201ENST00000260956 CHMP5Q9NZZ3 219 aa21.66■■□□□ 1.06
SSB-201ENST00000260956 RTCBQ9Y3I0 505 aaKnown RBP21.66■■□□□ 1.06
SSB-201ENST00000260956 IGKV5-2P06315 115 aa21.65■■□□□ 1.06
SSB-201ENST00000260956 CWF19L2Q2TBE0 894 aaKnown RBP21.65■■□□□ 1.06
SSB-201ENST00000260956 PI4K2BQ8TCG2 481 aa21.65■■□□□ 1.06
SSB-201ENST00000260956 QSER1Q2KHR3 1735 aa21.65■■□□□ 1.06
SSB-201ENST00000260956 NBPF26B4DH59 902 aa21.64■■□□□ 1.06
SSB-201ENST00000260956 ERC2O15083 957 aa21.64■■□□□ 1.06
SSB-201ENST00000260956 NBPF10Q6P3W6 841 aaKnown RBP21.64■■□□□ 1.06
SSB-201ENST00000260956 NBPF15Q8N660 670 aa21.64■■□□□ 1.06
SSB-201ENST00000260956 IL17RAQ96F46 866 aa21.64■■□□□ 1.06
SSB-201ENST00000260956 TEX13AQ9BXU3 409 aaPredicted RBP21.64■■□□□ 1.06
SSB-201ENST00000260956 AFDNP55196 1824 aaKnown RBP21.64■■□□□ 1.05
SSB-201ENST00000260956 SURF6O75683 361 aaKnown RBP21.63■■□□□ 1.05
SSB-201ENST00000260956 RABEP1Q15276 862 aa21.63■■□□□ 1.05
SSB-201ENST00000260956 KIF1BPQ96EK5 621 aa21.63■■□□□ 1.05
SSB-201ENST00000260956 K7ELQ4 463 aaPredicted RBP21.63■■□□□ 1.05
SSB-201ENST00000260956 PTGER2P43116 358 aa21.63■■□□□ 1.05
SSB-201ENST00000260956 SGIP1Q9BQI5 828 aa21.63■■□□□ 1.05
SSB-201ENST00000260956 ESYT1Q9BSJ8 1104 aa21.63■■□□□ 1.05
SSB-201ENST00000260956 IL1RAPL2Q9NP60 686 aa21.63■■□□□ 1.05
SSB-201ENST00000260956 COL15A1P39059 1388 aa21.62■■□□□ 1.05
SSB-201ENST00000260956 GRM8O00222 908 aa21.62■■□□□ 1.05
SSB-201ENST00000260956 CHMLP26374 656 aa21.62■■□□□ 1.05
SSB-201ENST00000260956 HMGB2P26583 209 aaKnown RBP21.62■■□□□ 1.05
SSB-201ENST00000260956 EIF5P55010 431 aaKnown RBP21.62■■□□□ 1.05
SSB-201ENST00000260956 TRAPPC3LQ5T215 181 aa21.62■■□□□ 1.05
SSB-201ENST00000260956 MSL1Q68DK7 614 aa21.62■■□□□ 1.05
SSB-201ENST00000260956 CASC1Q6TDU7 716 aa21.62■■□□□ 1.05
SSB-201ENST00000260956 UTRNP46939 3433 aa21.61■■□□□ 1.05
SSB-201ENST00000260956 REC8O95072 547 aa21.61■■□□□ 1.05
SSB-201ENST00000260956 DDX58O95786 925 aaKnown RBP21.61■■□□□ 1.05
SSB-201ENST00000260956 SUCLG2Q96I99 432 aa21.61■■□□□ 1.05
SSB-201ENST00000260956 BCL11AQ9H165 835 aa21.61■■□□□ 1.05
SSB-201ENST00000260956 SRP68Q9UHB9 627 aaKnown RBP21.61■■□□□ 1.05
SSB-201ENST00000260956 CIZ1Q9ULV3 898 aaPredicted RBP21.61■■□□□ 1.05
SSB-201ENST00000260956 SPRYD3Q8NCJ5 442 aa21.6■■□□□ 1.05
SSB-201ENST00000260956 FLAD1Q8NFF5 587 aa21.6■■□□□ 1.05
SSB-201ENST00000260956 MTFR1LQ9H019 292 aa21.6■■□□□ 1.05
SSB-201ENST00000260956 XAGE3Q8WTP9 111 aa21.6■■□□□ 1.05
SSB-201ENST00000260956 NEURL1BA8MQ27 555 aa21.59■■□□□ 1.05
SSB-201ENST00000260956 HSP90AB4PQ58FF6 505 aa21.59■■□□□ 1.05
SSB-201ENST00000260956 SLC16A10Q8TF71 515 aa21.59■■□□□ 1.05
SSB-201ENST00000260956 METTL22Q9BUU2 404 aaPredicted RBP21.59■■□□□ 1.05
SSB-201ENST00000260956 SPON1Q9HCB6 807 aa21.59■■□□□ 1.05
SSB-201ENST00000260956 ADRA2BP18089 450 aa21.58■■□□□ 1.05
SSB-201ENST00000260956 NUTM1Q86Y26 1132 aa21.58■■□□□ 1.05
SSB-201ENST00000260956 ERBB4Q15303 1308 aa21.58■■□□□ 1.04
SSB-201ENST00000260956 GSE1Q14687 1217 aa21.58■■□□□ 1.04
SSB-201ENST00000260956 C9orf78Q9NZ63 289 aaPredicted RBP21.58■■□□□ 1.04
SSB-201ENST00000260956 ZNF330Q9Y3S2 320 aaPredicted RBP21.58■■□□□ 1.04
SSB-201ENST00000260956 GYS1P13807 737 aa21.57■■□□□ 1.04
SSB-201ENST00000260956 RFC4P35249 363 aa21.57■■□□□ 1.04
SSB-201ENST00000260956 C4AP0C0L4 1744 aa21.56■■□□□ 1.04
SSB-201ENST00000260956 IL6STP40189 918 aaPredicted RBP21.56■■□□□ 1.04
SSB-201ENST00000260956 GCKRQ14397 625 aa21.56■■□□□ 1.04
SSB-201ENST00000260956 COPS6Q7L5N1 327 aa21.56■■□□□ 1.04
SSB-201ENST00000260956 IL25Q9H293 177 aa21.56■■□□□ 1.04
SSB-201ENST00000260956 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
SSB-201ENST00000260956 HDAC5Q9UQL6 1122 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms