RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TUBGCP6Q96RT7 1819 aa27.52■■■□□ 2
SIX3-201ENST00000260653 MYH14Q7Z406 1995 aaKnown RBP27.52■■■□□ 2
SIX3-201ENST00000260653 FOXO4P98177 505 aa27.51■■□□□ 1.99
SIX3-201ENST00000260653 ERC1Q8IUD2 1116 aa27.51■■□□□ 1.99
SIX3-201ENST00000260653 TRPC5Q9UL62 973 aaPredicted RBP27.51■■□□□ 1.99
SIX3-201ENST00000260653 DDRGK1Q96HY6 314 aa27.5■■□□□ 1.99
SIX3-201ENST00000260653 TRIM28Q13263 835 aaKnown RBP27.5■■□□□ 1.99
SIX3-201ENST00000260653 DZIP3Q86Y13 1208 aaKnown RBP27.5■■□□□ 1.99
SIX3-201ENST00000260653 TBC1D2BQ9UPU7 963 aa27.5■■□□□ 1.99
SIX3-201ENST00000260653 RFX5P48382 616 aaPredicted RBP27.49■■□□□ 1.99
SIX3-201ENST00000260653 G3BP1Q13283 466 aaKnown RBP eCLIP27.49■■□□□ 1.99
SIX3-201ENST00000260653 LMBR1LQ6UX01 489 aa27.49■■□□□ 1.99
SIX3-201ENST00000260653 SASH1O94885 1247 aa27.49■■□□□ 1.99
SIX3-201ENST00000260653 EIF5P55010 431 aaKnown RBP27.49■■□□□ 1.99
SIX3-201ENST00000260653 RREB1Q92766 1687 aa27.49■■□□□ 1.99
SIX3-201ENST00000260653 C22orf23Q9BZE7 217 aa27.48■■□□□ 1.99
SIX3-201ENST00000260653 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.48■■□□□ 1.99
SIX3-201ENST00000260653 NUP98P52948 1817 aa27.48■■□□□ 1.99
SIX3-201ENST00000260653 GPTP24298 496 aa27.47■■□□□ 1.99
SIX3-201ENST00000260653 CLASRPQ8N2M8 674 aaKnown RBP27.47■■□□□ 1.99
SIX3-201ENST00000260653 AOX1Q06278 1338 aa27.47■■□□□ 1.99
SIX3-201ENST00000260653 ANKRD36CQ5JPF3 1778 aa27.47■■□□□ 1.99
SIX3-201ENST00000260653 COL5A3P25940 1745 aaPredicted RBP27.47■■□□□ 1.99
SIX3-201ENST00000260653 PTPN12Q05209 780 aaKnown RBP27.47■■□□□ 1.99
SIX3-201ENST00000260653 COPRSQ9NQ92 184 aa27.47■■□□□ 1.99
SIX3-201ENST00000260653 BTAF1O14981 1849 aa27.46■■□□□ 1.99
SIX3-201ENST00000260653 CHMP3Q9Y3E7 222 aa27.46■■□□□ 1.99
SIX3-201ENST00000260653 NHSQ6T4R5 1651 aa27.46■■□□□ 1.99
SIX3-201ENST00000260653 ONECUT3O60422 494 aaPredicted RBP27.45■■□□□ 1.99
SIX3-201ENST00000260653 HSP90AB3PQ58FF7 597 aa27.45■■□□□ 1.98
SIX3-201ENST00000260653 ERVV-1B6SEH8 477 aa27.44■■□□□ 1.98
SIX3-201ENST00000260653 KCNQ4P56696 695 aa27.44■■□□□ 1.98
SIX3-201ENST00000260653 SEPT12Q8IYM1 358 aa27.44■■□□□ 1.98
SIX3-201ENST00000260653 PI4K2BQ8TCG2 481 aa27.44■■□□□ 1.98
SIX3-201ENST00000260653 FAM89AQ96GI7 184 aa27.44■■□□□ 1.98
SIX3-201ENST00000260653 ZNF831Q5JPB2 1677 aa27.44■■□□□ 1.98
SIX3-201ENST00000260653 NLRP10Q86W26 655 aa27.44■■□□□ 1.98
SIX3-201ENST00000260653 PCCAP05165 728 aaPredicted RBP27.43■■□□□ 1.98
SIX3-201ENST00000260653 QTRT2Q9H974 415 aaKnown RBP27.43■■□□□ 1.98
SIX3-201ENST00000260653 ZBTB38Q8NAP3 1195 aaPredicted RBP27.42■■□□□ 1.98
SIX3-201ENST00000260653 LINC00116Q8NCU8 138 aa27.42■■□□□ 1.98
SIX3-201ENST00000260653 AACSQ86V21 672 aa27.42■■□□□ 1.98
SIX3-201ENST00000260653 USP42Q9H9J4 1324 aaKnown RBP27.41■■□□□ 1.98
SIX3-201ENST00000260653 TRIM6-TRIM34B2RNG4 842 aa27.41■■□□□ 1.98
SIX3-201ENST00000260653 EAF2Q96CJ1 260 aaPredicted RBP27.41■■□□□ 1.98
SIX3-201ENST00000260653 IFIT2P09913 472 aaKnown RBP27.4■■□□□ 1.98
SIX3-201ENST00000260653 SYNE4Q8N205 404 aa27.4■■□□□ 1.98
SIX3-201ENST00000260653 RILPL2Q969X0 211 aa27.4■■□□□ 1.98
SIX3-201ENST00000260653 SBF2Q86WG5 1849 aa27.4■■□□□ 1.98
SIX3-201ENST00000260653 CASC1Q6TDU7 716 aa27.39■■□□□ 1.98
SIX3-201ENST00000260653 UBN2Q6ZU65 1347 aa27.39■■□□□ 1.98
SIX3-201ENST00000260653 SLC4A3P48751 1232 aa27.39■■□□□ 1.97
SIX3-201ENST00000260653 TTC41PQ6P2S7 1318 aa27.39■■□□□ 1.97
SIX3-201ENST00000260653 EP400Q96L91 3159 aa27.38■■□□□ 1.97
SIX3-201ENST00000260653 RBM25P49756 843 aaKnown RBP27.38■■□□□ 1.97
SIX3-201ENST00000260653 MAP4K4O95819 1239 aaPredicted RBP27.37■■□□□ 1.97
SIX3-201ENST00000260653 ZNF34Q8IZ26 560 aa27.37■■□□□ 1.97
SIX3-201ENST00000260653 CCDC8Q9H0W5 538 aaPredicted RBP27.37■■□□□ 1.97
SIX3-201ENST00000260653 TLR7Q9NYK1 1049 aaKnown RBP27.37■■□□□ 1.97
SIX3-201ENST00000260653 CAMTA2O94983 1202 aa27.37■■□□□ 1.97
SIX3-201ENST00000260653 TFCP2Q12800 502 aa27.36■■□□□ 1.97
SIX3-201ENST00000260653 PLA2G12BQ9BX93 195 aa27.36■■□□□ 1.97
SIX3-201ENST00000260653 ECHDC1Q9NTX5 307 aa27.36■■□□□ 1.97
SIX3-201ENST00000260653 CDHR2Q9BYE9 1310 aa27.36■■□□□ 1.97
SIX3-201ENST00000260653 TRMT112Q9UI30 125 aaKnown RBP27.36■■□□□ 1.97
SIX3-201ENST00000260653 AK9Q5TCS8 1911 aa27.36■■□□□ 1.97
SIX3-201ENST00000260653 GPATCH3Q96I76 525 aa27.35■■□□□ 1.97
SIX3-201ENST00000260653 ZNF594Q96JF6 807 aaPredicted RBP27.35■■□□□ 1.97
SIX3-201ENST00000260653 GLRX3O76003 335 aaKnown RBP27.34■■□□□ 1.97
SIX3-201ENST00000260653 CCDC85AQ96PX6 553 aaPredicted RBP27.34■■□□□ 1.97
SIX3-201ENST00000260653 ERC2O15083 957 aa27.33■■□□□ 1.97
SIX3-201ENST00000260653 ATG9AQ7Z3C6 839 aa27.33■■□□□ 1.97
SIX3-201ENST00000260653 CNTNAP4Q9C0A0 1308 aa27.33■■□□□ 1.97
SIX3-201ENST00000260653 CHMLP26374 656 aa27.32■■□□□ 1.96
SIX3-201ENST00000260653 TNNI3KQ59H18 835 aa27.32■■□□□ 1.96
SIX3-201ENST00000260653 CCNL1Q9UK58 526 aaPredicted RBP27.32■■□□□ 1.96
SIX3-201ENST00000260653 FPGT-TNNI3KV9GXZ4 949 aa27.32■■□□□ 1.96
SIX3-201ENST00000260653 IRS4O14654 1257 aaPredicted RBP27.31■■□□□ 1.96
SIX3-201ENST00000260653 CSF1RP07333 972 aa27.31■■□□□ 1.96
SIX3-201ENST00000260653 CCDC57Q2TAC2 916 aa27.31■■□□□ 1.96
SIX3-201ENST00000260653 MYH3P11055 1940 aa27.31■■□□□ 1.96
SIX3-201ENST00000260653 BCORQ6W2J9 1755 aa27.3■■□□□ 1.96
SIX3-201ENST00000260653 LRRC24Q50LG9 513 aa27.3■■□□□ 1.96
SIX3-201ENST00000260653 LY75O60449 1722 aa27.3■■□□□ 1.96
SIX3-201ENST00000260653 CNTROBQ8N137 903 aa27.3■■□□□ 1.96
SIX3-201ENST00000260653 BRWD3Q6RI45 1802 aa27.29■■□□□ 1.96
SIX3-201ENST00000260653 EYA2O00167 538 aa27.29■■□□□ 1.96
SIX3-201ENST00000260653 SUSD4Q5VX71 490 aa27.29■■□□□ 1.96
SIX3-201ENST00000260653 SMIM5Q71RC9 77 aa27.29■■□□□ 1.96
SIX3-201ENST00000260653 USP26Q9BXU7 913 aa27.29■■□□□ 1.96
SIX3-201ENST00000260653 PUS3Q9BZE2 481 aaKnown RBP27.29■■□□□ 1.96
SIX3-201ENST00000260653 ESYT1Q9BSJ8 1104 aa27.29■■□□□ 1.96
SIX3-201ENST00000260653 DBNLQ9UJU6 430 aaKnown RBP27.29■■□□□ 1.96
SIX3-201ENST00000260653 FAM177BA6PVY3 158 aa27.28■■□□□ 1.96
SIX3-201ENST00000260653 CTSWP56202 376 aa27.28■■□□□ 1.96
SIX3-201ENST00000260653 TTLL11Q8NHH1 800 aa27.28■■□□□ 1.96
SIX3-201ENST00000260653 IL15P40933 162 aaPredicted RBP27.28■■□□□ 1.96
SIX3-201ENST00000260653 KIF2CQ99661 725 aa27.28■■□□□ 1.96
SIX3-201ENST00000260653 NIP7Q9Y221 180 aaKnown RBP eCLIP27.27■■□□□ 1.96
SIX3-201ENST00000260653 REC8O95072 547 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms