RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 LNPKQ9C0E8 428 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
NIP7-202ENST00000254941 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
NIP7-202ENST00000254941 TBC1D2BQ9UPU7 963 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 TSHZ2Q9NRE2 1034 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 C4BP0C0L5 1744 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 TRIM37O94972 964 aa11.75□□□□□ -0.53
NIP7-202ENST00000254941 RABL6Q3YEC7 729 aaPredicted RBP11.74□□□□□ -0.53
NIP7-202ENST00000254941 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
NIP7-202ENST00000254941 EXOC6BQ9Y2D4 811 aa11.74□□□□□ -0.53
NIP7-202ENST00000254941 CAMTA2O94983 1202 aa11.74□□□□□ -0.53
NIP7-202ENST00000254941 EPHA10Q5JZY3 1008 aa11.74□□□□□ -0.53
NIP7-202ENST00000254941 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
NIP7-202ENST00000254941 UBR3Q6ZT12 1888 aa11.74□□□□□ -0.53
NIP7-202ENST00000254941 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
NIP7-202ENST00000254941 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
NIP7-202ENST00000254941 ZNF34Q8IZ26 560 aa11.73□□□□□ -0.53
NIP7-202ENST00000254941 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
NIP7-202ENST00000254941 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
NIP7-202ENST00000254941 NOP58Q9Y2X3 529 aaKnown RBP11.73□□□□□ -0.53
NIP7-202ENST00000254941 C4AP0C0L4 1744 aa11.73□□□□□ -0.53
NIP7-202ENST00000254941 RGL2O15211 777 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 RAB11FIP3O75154 756 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
NIP7-202ENST00000254941 PCCAP05165 728 aaPredicted RBP11.72□□□□□ -0.53
NIP7-202ENST00000254941 HSP90AB4PQ58FF6 505 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 SLC27A3Q5K4L6 730 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 ZBTB38Q8NAP3 1195 aaPredicted RBP11.72□□□□□ -0.53
NIP7-202ENST00000254941 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 APBB1O00213 710 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 GPTP24298 496 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 FOXO4P98177 505 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
NIP7-202ENST00000254941 TNS1Q9HBL0 1735 aaKnown RBP11.72□□□□□ -0.53
NIP7-202ENST00000254941 UBN2Q6ZU65 1347 aa11.71□□□□□ -0.53
NIP7-202ENST00000254941 GNPATO15228 680 aa11.71□□□□□ -0.53
NIP7-202ENST00000254941 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
NIP7-202ENST00000254941 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
NIP7-202ENST00000254941 ZNF652Q9Y2D9 606 aa11.71□□□□□ -0.53
NIP7-202ENST00000254941 RTCBQ9Y3I0 505 aaKnown RBP11.71□□□□□ -0.53
NIP7-202ENST00000254941 RGPD3A6NKT7 1758 aaPredicted RBP11.71□□□□□ -0.54
NIP7-202ENST00000254941 RGPD4Q7Z3J3 1758 aa11.71□□□□□ -0.54
NIP7-202ENST00000254941 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.54
NIP7-202ENST00000254941 PLSCR1O15162 318 aa11.7□□□□□ -0.54
NIP7-202ENST00000254941 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
NIP7-202ENST00000254941 HMGB2P26583 209 aaKnown RBP11.7□□□□□ -0.54
NIP7-202ENST00000254941 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
NIP7-202ENST00000254941 KIF1BPQ96EK5 621 aa11.7□□□□□ -0.54
NIP7-202ENST00000254941 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
NIP7-202ENST00000254941 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
NIP7-202ENST00000254941 LMBR1LQ6UX01 489 aa11.7□□□□□ -0.54
NIP7-202ENST00000254941 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
NIP7-202ENST00000254941 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
NIP7-202ENST00000254941 COPRSQ9NQ92 184 aa11.7□□□□□ -0.54
NIP7-202ENST00000254941 LAMB2P55268 1798 aa11.69□□□□□ -0.54
NIP7-202ENST00000254941 RFX5P48382 616 aaPredicted RBP11.69□□□□□ -0.54
NIP7-202ENST00000254941 C8orf34Q49A92 452 aa11.69□□□□□ -0.54
NIP7-202ENST00000254941 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
NIP7-202ENST00000254941 AMIGO3Q86WK7 504 aa11.69□□□□□ -0.54
NIP7-202ENST00000254941 RHPN1Q8TCX5 695 aa11.69□□□□□ -0.54
NIP7-202ENST00000254941 NARFQ9UHQ1 456 aa11.69□□□□□ -0.54
NIP7-202ENST00000254941 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
NIP7-202ENST00000254941 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
NIP7-202ENST00000254941 TUBGCP6Q96RT7 1819 aa11.69□□□□□ -0.54
NIP7-202ENST00000254941 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
NIP7-202ENST00000254941 TXNRD1Q16881 649 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 PROM2Q8N271 834 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 AK7Q96M32 723 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 COL24A1Q17RW2 1714 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
NIP7-202ENST00000254941 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 SYNE4Q8N205 404 aa11.68□□□□□ -0.54
NIP7-202ENST00000254941 OTUD7AQ8TE49 926 aaPredicted RBP11.68□□□□□ -0.54
NIP7-202ENST00000254941 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
NIP7-202ENST00000254941 NIP7Q9Y221 180 aaKnown RBP eCLIP11.68□□□□□ -0.54
NIP7-202ENST00000254941 CASZ1Q86V15 1759 aa11.67□□□□□ -0.54
NIP7-202ENST00000254941 SALL3Q9BXA9 1300 aa11.67□□□□□ -0.54
NIP7-202ENST00000254941 ZPR1O75312 459 aa11.67□□□□□ -0.54
NIP7-202ENST00000254941 APBA3O96018 575 aa11.67□□□□□ -0.54
NIP7-202ENST00000254941 CSF1RP07333 972 aa11.67□□□□□ -0.54
NIP7-202ENST00000254941 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
NIP7-202ENST00000254941 OS9Q13438 667 aaPredicted RBP11.67□□□□□ -0.54
NIP7-202ENST00000254941 SMIM5Q71RC9 77 aa11.67□□□□□ -0.54
NIP7-202ENST00000254941 OSBPL3Q9H4L5 887 aa11.67□□□□□ -0.54
NIP7-202ENST00000254941 BCL2L12Q9HB09 334 aa11.67□□□□□ -0.54
NIP7-202ENST00000254941 IRS4O14654 1257 aaPredicted RBP11.66□□□□□ -0.54
NIP7-202ENST00000254941 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 KLHDC4Q8TBB5 520 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 UTP14AQ9BVJ6 771 aaKnown RBP11.66□□□□□ -0.54
NIP7-202ENST00000254941 IL1RAPL2Q9NP60 686 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 RBM19Q9Y4C8 960 aaKnown RBP11.66□□□□□ -0.54
NIP7-202ENST00000254941 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 USP42Q9H9J4 1324 aaKnown RBP11.66□□□□□ -0.54
NIP7-202ENST00000254941 AK9Q5TCS8 1911 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 SASH1O94885 1247 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 NTSR2O95665 410 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms