RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 TEX13AQ9BXU3 409 aaPredicted RBP18.26■□□□□ 0.51
DDX49-201ENST00000247003 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
DDX49-201ENST00000247003 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
DDX49-201ENST00000247003 TJP1Q07157 1748 aa18.26■□□□□ 0.51
DDX49-201ENST00000247003 PLCH1Q4KWH8 1693 aa18.26■□□□□ 0.51
DDX49-201ENST00000247003 BAG4O95429 457 aaKnown RBP18.26■□□□□ 0.51
DDX49-201ENST00000247003 A1BGP04217 495 aa18.26■□□□□ 0.51
DDX49-201ENST00000247003 PTPN12Q05209 780 aaKnown RBP18.26■□□□□ 0.51
DDX49-201ENST00000247003 CCDC191Q8NCU4 936 aa18.26■□□□□ 0.51
DDX49-201ENST00000247003 JARID2Q92833 1246 aaPredicted RBP18.26■□□□□ 0.51
DDX49-201ENST00000247003 FSD1Q9BTV5 496 aa18.26■□□□□ 0.51
DDX49-201ENST00000247003 RFX5P48382 616 aaPredicted RBP18.25■□□□□ 0.51
DDX49-201ENST00000247003 TTLL7Q6ZT98 887 aa18.25■□□□□ 0.51
DDX49-201ENST00000247003 NOL8Q76FK4 1167 aaKnown RBP18.25■□□□□ 0.51
DDX49-201ENST00000247003 ZBTB3Q9H5J0 574 aa18.25■□□□□ 0.51
DDX49-201ENST00000247003 TLR7Q9NYK1 1049 aaKnown RBP18.25■□□□□ 0.51
DDX49-201ENST00000247003 SNX14Q9Y5W7 946 aa18.25■□□□□ 0.51
DDX49-201ENST00000247003 CYP2E1P05181 493 aaPredicted RBP18.24■□□□□ 0.51
DDX49-201ENST00000247003 CASP7P55210 303 aa18.24■□□□□ 0.51
DDX49-201ENST00000247003 CUL4AQ13619 759 aa18.24■□□□□ 0.51
DDX49-201ENST00000247003 TNNI3KQ59H18 835 aa18.24■□□□□ 0.51
DDX49-201ENST00000247003 BOLA2Q9H3K6 86 aa18.24■□□□□ 0.51
DDX49-201ENST00000247003 FPGT-TNNI3KV9GXZ4 949 aa18.24■□□□□ 0.51
DDX49-201ENST00000247003 H7C1W4 665 aa18.23■□□□□ 0.51
DDX49-201ENST00000247003 LMBR1LQ6UX01 489 aa18.23■□□□□ 0.51
DDX49-201ENST00000247003 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
DDX49-201ENST00000247003 AHDC1Q5TGY3 1603 aaPredicted RBP18.23■□□□□ 0.51
DDX49-201ENST00000247003 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
DDX49-201ENST00000247003 KCNJ4P48050 445 aa18.23■□□□□ 0.51
DDX49-201ENST00000247003 TFCP2Q12800 502 aa18.23■□□□□ 0.51
DDX49-201ENST00000247003 KIF6Q6ZMV9 814 aa18.23■□□□□ 0.51
DDX49-201ENST00000247003 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
DDX49-201ENST00000247003 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
DDX49-201ENST00000247003 ZKSCAN1P17029 563 aaPredicted RBP18.22■□□□□ 0.51
DDX49-201ENST00000247003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.22■□□□□ 0.51
DDX49-201ENST00000247003 LRP6O75581 1613 aa18.22■□□□□ 0.51
DDX49-201ENST00000247003 STARD3NLO95772 234 aa18.21■□□□□ 0.51
DDX49-201ENST00000247003 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
DDX49-201ENST00000247003 ZNF330Q9Y3S2 320 aaPredicted RBP18.21■□□□□ 0.51
DDX49-201ENST00000247003 ITGB4P16144 1822 aa18.21■□□□□ 0.51
DDX49-201ENST00000247003 RFX7Q2KHR2 1363 aa18.21■□□□□ 0.51
DDX49-201ENST00000247003 TOM1O60784 492 aa18.21■□□□□ 0.51
DDX49-201ENST00000247003 ATP5JP18859 108 aa18.21■□□□□ 0.51
DDX49-201ENST00000247003 NMIQ13287 307 aaPredicted RBP18.21■□□□□ 0.51
DDX49-201ENST00000247003 DISP2A7MBM2 1401 aa18.2■□□□□ 0.5
DDX49-201ENST00000247003 WNK3Q9BYP7 1800 aa18.2■□□□□ 0.5
DDX49-201ENST00000247003 FOXO4P98177 505 aa18.2■□□□□ 0.5
DDX49-201ENST00000247003 DBNLQ9UJU6 430 aaKnown RBP18.2■□□□□ 0.5
DDX49-201ENST00000247003 CASTP20810 708 aaKnown RBP18.19■□□□□ 0.5
DDX49-201ENST00000247003 PKP1Q13835 747 aa18.19■□□□□ 0.5
DDX49-201ENST00000247003 RNF20Q5VTR2 975 aa18.19■□□□□ 0.5
DDX49-201ENST00000247003 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
DDX49-201ENST00000247003 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
DDX49-201ENST00000247003 COL16A1Q07092 1604 aaPredicted RBP18.19■□□□□ 0.5
DDX49-201ENST00000247003 IL15P40933 162 aaPredicted RBP18.19■□□□□ 0.5
DDX49-201ENST00000247003 PTH1RQ03431 593 aa18.19■□□□□ 0.5
DDX49-201ENST00000247003 KLHL40Q2TBA0 621 aa18.19■□□□□ 0.5
DDX49-201ENST00000247003 PIGBQ92521 554 aa18.19■□□□□ 0.5
DDX49-201ENST00000247003 RASEFQ8IZ41 740 aa18.18■□□□□ 0.5
DDX49-201ENST00000247003 FAM227BQ96M60 508 aa18.18■□□□□ 0.5
DDX49-201ENST00000247003 TM6SF1Q9BZW5 370 aa18.18■□□□□ 0.5
DDX49-201ENST00000247003 SNRKQ9NRH2 765 aa18.18■□□□□ 0.5
DDX49-201ENST00000247003 CYP46A1Q9Y6A2 500 aa18.18■□□□□ 0.5
DDX49-201ENST00000247003 FSD2A1L4K1 749 aa18.17■□□□□ 0.5
DDX49-201ENST00000247003 JAKMIP1Q96N16 626 aaKnown RBP18.17■□□□□ 0.5
DDX49-201ENST00000247003 TTC14Q96N46 770 aa18.17■□□□□ 0.5
DDX49-201ENST00000247003 ARXQ96QS3 562 aa18.17■□□□□ 0.5
DDX49-201ENST00000247003 GPR108Q9NPR9 543 aa18.17■□□□□ 0.5
DDX49-201ENST00000247003 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
DDX49-201ENST00000247003 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
DDX49-201ENST00000247003 LIMCH1Q9UPQ0 1083 aa18.17■□□□□ 0.5
DDX49-201ENST00000247003 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.17■□□□□ 0.5
DDX49-201ENST00000247003 RBM8AQ9Y5S9 174 aaKnown RBP18.17■□□□□ 0.5
DDX49-201ENST00000247003 MED23Q9ULK4 1368 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 EXOC5O00471 708 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 PSMA5P28066 241 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 AK2P54819 239 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 TCIRG1Q13488 830 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 DNAJC10Q8IXB1 793 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 BRPF3Q9ULD4 1205 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 MRE11P49959 708 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 KCNB2Q92953 911 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 DNAJC2Q99543 621 aaKnown RBP18.16■□□□□ 0.5
DDX49-201ENST00000247003 DBNDD2Q9BQY9 259 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 ISCA1Q9BUE6 129 aa18.16■□□□□ 0.5
DDX49-201ENST00000247003 BCL9O00512 1426 aa18.15■□□□□ 0.5
DDX49-201ENST00000247003 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
DDX49-201ENST00000247003 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
DDX49-201ENST00000247003 CERKQ8TCT0 537 aa18.15■□□□□ 0.5
DDX49-201ENST00000247003 PDRG1Q9NUG6 133 aa18.15■□□□□ 0.5
DDX49-201ENST00000247003 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
DDX49-201ENST00000247003 WDR33Q9C0J8 1336 aaKnown RBP18.14■□□□□ 0.5
DDX49-201ENST00000247003 CIAO1O76071 339 aa18.14■□□□□ 0.5
DDX49-201ENST00000247003 BRD1O95696 1058 aa18.14■□□□□ 0.5
DDX49-201ENST00000247003 CCDC57Q2TAC2 916 aa18.14■□□□□ 0.5
DDX49-201ENST00000247003 HSP90AB3PQ58FF7 597 aa18.14■□□□□ 0.5
DDX49-201ENST00000247003 NEUROD6Q96NK8 337 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms