RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 NLRP10Q86W26 655 aa24.02■■□□□ 1.44
SBDS-201ENST00000246868 FLAD1Q8NFF5 587 aa24.02■■□□□ 1.44
SBDS-201ENST00000246868 USP42Q9H9J4 1324 aaKnown RBP24.02■■□□□ 1.44
SBDS-201ENST00000246868 UBE3BQ7Z3V4 1068 aa24.01■■□□□ 1.43
SBDS-201ENST00000246868 HDAC1Q13547 482 aaPredicted RBP24■■□□□ 1.43
SBDS-201ENST00000246868 SRP68Q9UHB9 627 aaKnown RBP24■■□□□ 1.43
SBDS-201ENST00000246868 NIP7Q9Y221 180 aaKnown RBP eCLIP24■■□□□ 1.43
SBDS-201ENST00000246868 CEP85Q6P2H3 762 aa23.99■■□□□ 1.43
SBDS-201ENST00000246868 ANKRD44Q8N8A2 993 aa23.99■■□□□ 1.43
SBDS-201ENST00000246868 STK32BQ9NY57 414 aa23.99■■□□□ 1.43
SBDS-201ENST00000246868 H7C1W4 665 aa23.99■■□□□ 1.43
SBDS-201ENST00000246868 HMMRO75330 724 aa23.99■■□□□ 1.43
SBDS-201ENST00000246868 CENPQQ7L2Z9 268 aaPredicted RBP23.99■■□□□ 1.43
SBDS-201ENST00000246868 PCCAP05165 728 aaPredicted RBP23.98■■□□□ 1.43
SBDS-201ENST00000246868 ZBTB38Q8NAP3 1195 aaPredicted RBP23.98■■□□□ 1.43
SBDS-201ENST00000246868 PPP1R42Q7Z4L9 355 aa23.97■■□□□ 1.43
SBDS-201ENST00000246868 BCL2L12Q9HB09 334 aa23.97■■□□□ 1.43
SBDS-201ENST00000246868 TRMT112Q9UI30 125 aaKnown RBP23.97■■□□□ 1.43
SBDS-201ENST00000246868 UBN2Q6ZU65 1347 aa23.96■■□□□ 1.43
SBDS-201ENST00000246868 SUCLG2Q96I99 432 aa23.96■■□□□ 1.43
SBDS-201ENST00000246868 SETDB2Q96T68 719 aa23.96■■□□□ 1.43
SBDS-201ENST00000246868 SLC15A2Q16348 729 aa23.95■■□□□ 1.43
SBDS-201ENST00000246868 JARID2Q92833 1246 aaPredicted RBP23.95■■□□□ 1.43
SBDS-201ENST00000246868 UTP14AQ9BVJ6 771 aaKnown RBP23.95■■□□□ 1.43
SBDS-201ENST00000246868 MSH5O43196 834 aa23.95■■□□□ 1.42
SBDS-201ENST00000246868 IGHDP01880 384 aa23.95■■□□□ 1.42
SBDS-201ENST00000246868 CASP7P55210 303 aa23.95■■□□□ 1.42
SBDS-201ENST00000246868 ATP8B2P98198 1209 aa23.95■■□□□ 1.42
SBDS-201ENST00000246868 RTL5Q5HYW3 569 aaPredicted RBP23.95■■□□□ 1.42
SBDS-201ENST00000246868 TUBGCP6Q96RT7 1819 aa23.94■■□□□ 1.42
SBDS-201ENST00000246868 TBC1D9BQ66K14 1250 aa23.94■■□□□ 1.42
SBDS-201ENST00000246868 BICDL1Q6ZP65 573 aa23.94■■□□□ 1.42
SBDS-201ENST00000246868 SIRT2Q8IXJ6 389 aa23.94■■□□□ 1.42
SBDS-201ENST00000246868 FAM89AQ96GI7 184 aa23.94■■□□□ 1.42
SBDS-201ENST00000246868 KDM2BQ8NHM5 1336 aa23.93■■□□□ 1.42
SBDS-201ENST00000246868 SUSD4Q5VX71 490 aa23.93■■□□□ 1.42
SBDS-201ENST00000246868 BICC1Q9H694 974 aaKnown RBP23.93■■□□□ 1.42
SBDS-201ENST00000246868 ANO8Q9HCE9 1232 aaPredicted RBP23.93■■□□□ 1.42
SBDS-201ENST00000246868 CDHR2Q9BYE9 1310 aa23.93■■□□□ 1.42
SBDS-201ENST00000246868 HSP90B1P14625 803 aaKnown RBP23.92■■□□□ 1.42
SBDS-201ENST00000246868 COL23A1Q86Y22 540 aaPredicted RBP23.92■■□□□ 1.42
SBDS-201ENST00000246868 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
SBDS-201ENST00000246868 FAM177BA6PVY3 158 aa23.92■■□□□ 1.42
SBDS-201ENST00000246868 GYS1P13807 737 aa23.92■■□□□ 1.42
SBDS-201ENST00000246868 UPF1Q92900 1129 aaKnown RBP eCLIP23.92■■□□□ 1.42
SBDS-201ENST00000246868 KAZALD1Q96I82 304 aa23.92■■□□□ 1.42
SBDS-201ENST00000246868 NYXQ9GZU5 481 aa23.92■■□□□ 1.42
SBDS-201ENST00000246868 PNPLA7Q6ZV29 1317 aa23.91■■□□□ 1.42
SBDS-201ENST00000246868 SRGAP3O43295 1099 aa23.91■■□□□ 1.42
SBDS-201ENST00000246868 MTX1Q13505 466 aa23.91■■□□□ 1.42
SBDS-201ENST00000246868 QSER1Q2KHR3 1735 aa23.89■■□□□ 1.42
SBDS-201ENST00000246868 PNMA6EA0A0J9YXQ4 647 aa23.89■■□□□ 1.42
SBDS-201ENST00000246868 IRS4O14654 1257 aaPredicted RBP23.89■■□□□ 1.42
SBDS-201ENST00000246868 NTSR2O95665 410 aa23.89■■□□□ 1.42
SBDS-201ENST00000246868 GTF2E1P29083 439 aaPredicted RBP23.89■■□□□ 1.42
SBDS-201ENST00000246868 GCC1Q96CN9 775 aa23.89■■□□□ 1.42
SBDS-201ENST00000246868 PLA2G12BQ9BX93 195 aa23.89■■□□□ 1.42
SBDS-201ENST00000246868 CARMIL3Q8ND23 1372 aa23.89■■□□□ 1.41
SBDS-201ENST00000246868 NBPF5PQ86XG9 351 aaPredicted RBP23.88■■□□□ 1.41
SBDS-201ENST00000246868 SSH3Q8TE77 659 aa23.88■■□□□ 1.41
SBDS-201ENST00000246868 COL24A1Q17RW2 1714 aa23.88■■□□□ 1.41
SBDS-201ENST00000246868 RABL6Q3YEC7 729 aaPredicted RBP23.88■■□□□ 1.41
SBDS-201ENST00000246868 EPHA10Q5JZY3 1008 aa23.88■■□□□ 1.41
SBDS-201ENST00000246868 NLGN1Q8N2Q7 840 aa23.88■■□□□ 1.41
SBDS-201ENST00000246868 NPHP1O15259 732 aa23.87■■□□□ 1.41
SBDS-201ENST00000246868 FOXO4P98177 505 aa23.87■■□□□ 1.41
SBDS-201ENST00000246868 NFIXQ14938 502 aa23.87■■□□□ 1.41
SBDS-201ENST00000246868 TPTE2Q6XPS3 522 aa23.87■■□□□ 1.41
SBDS-201ENST00000246868 POLA2Q14181 598 aa23.86■■□□□ 1.41
SBDS-201ENST00000246868 LMBR1LQ6UX01 489 aa23.86■■□□□ 1.41
SBDS-201ENST00000246868 SMC5Q8IY18 1101 aa23.86■■□□□ 1.41
SBDS-201ENST00000246868 SYNE4Q8N205 404 aa23.86■■□□□ 1.41
SBDS-201ENST00000246868 DCTPP1Q9H773 170 aa23.86■■□□□ 1.41
SBDS-201ENST00000246868 CHMP3Q9Y3E7 222 aa23.86■■□□□ 1.41
SBDS-201ENST00000246868 PDE8AO60658 829 aa23.85■■□□□ 1.41
SBDS-201ENST00000246868 NUTM1Q86Y26 1132 aa23.84■■□□□ 1.41
SBDS-201ENST00000246868 MYH3P11055 1940 aa23.84■■□□□ 1.41
SBDS-201ENST00000246868 TM4SF1P30408 202 aa23.83■■□□□ 1.41
SBDS-201ENST00000246868 CTSWP56202 376 aa23.83■■□□□ 1.41
SBDS-201ENST00000246868 ZBTB47Q9UFB7 747 aaPredicted RBP23.83■■□□□ 1.41
SBDS-201ENST00000246868 HCLS1P14317 486 aaPredicted RBP23.82■■□□□ 1.4
SBDS-201ENST00000246868 ERFEQ4G0M1 354 aa23.82■■□□□ 1.4
SBDS-201ENST00000246868 HSP90AB4PQ58FF6 505 aa23.82■■□□□ 1.4
SBDS-201ENST00000246868 LAMB2P55268 1798 aa23.82■■□□□ 1.4
SBDS-201ENST00000246868 CNBD1Q8NA66 436 aa23.81■■□□□ 1.4
SBDS-201ENST00000246868 SURF6O75683 361 aaKnown RBP23.81■■□□□ 1.4
SBDS-201ENST00000246868 CSF1RP07333 972 aa23.81■■□□□ 1.4
SBDS-201ENST00000246868 CCDC57Q2TAC2 916 aa23.8■■□□□ 1.4
SBDS-201ENST00000246868 SLC10A5Q5PT55 438 aa23.8■■□□□ 1.4
SBDS-201ENST00000246868 EXOC6BQ9Y2D4 811 aa23.8■■□□□ 1.4
SBDS-201ENST00000246868 SERPINB2P05120 415 aa23.79■■□□□ 1.4
SBDS-201ENST00000246868 TTLL11Q8NHH1 800 aa23.79■■□□□ 1.4
SBDS-201ENST00000246868 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
SBDS-201ENST00000246868 ST5P78524 1137 aa23.78■■□□□ 1.4
SBDS-201ENST00000246868 IFIT5Q13325 482 aaKnown RBP23.78■■□□□ 1.4
SBDS-201ENST00000246868 OS9Q13438 667 aaPredicted RBP23.78■■□□□ 1.4
SBDS-201ENST00000246868 CCDC152Q4G0S7 254 aa23.78■■□□□ 1.4
SBDS-201ENST00000246868 ANKRD45Q5TZF3 282 aa23.78■■□□□ 1.4
SBDS-201ENST00000246868 POLRMTO00411 1230 aaKnown RBP23.77■■□□□ 1.4
SBDS-201ENST00000246868 RAB11FIP3O75154 756 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms