RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 STK3Q13188 491 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 NMIQ13287 307 aaPredicted RBP18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 PRDM10Q9NQV6 1147 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 KCNF1Q9H3M0 494 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 ZSWIM6Q9HCJ5 1215 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 LMO7Q8WWI1 1683 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 LIG1P18858 919 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 VPS53Q5VIR6 699 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 CREB3L3Q68CJ9 461 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 BOLA2Q9H3K6 86 aa18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 TFIP11Q9UBB9 837 aaKnown RBP18.36■□□□□ 0.53
PCDHB8-201ENST00000239444 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 TTC41PQ6P2S7 1318 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 A0A0U1RQG5 324 aaPredicted RBP18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 NECTIN1Q15223 517 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 CKAP2LQ8IYA6 745 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 EAF2Q96CJ1 260 aaPredicted RBP18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 SLIT3O75094 1523 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 A0A0D9SFI3 127 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 GCP02774 474 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 CHGBP05060 677 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 LARP1BQ659C4 914 aaKnown RBP18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 MYRIPQ8NFW9 859 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 NDUFB9Q9Y6M9 179 aa18.35■□□□□ 0.53
PCDHB8-201ENST00000239444 SASH1O94885 1247 aa18.34■□□□□ 0.53
PCDHB8-201ENST00000239444 RUFY2Q8WXA3 655 aa18.34■□□□□ 0.53
PCDHB8-201ENST00000239444 SUCLG2Q96I99 432 aa18.34■□□□□ 0.53
PCDHB8-201ENST00000239444 PRDM4Q9UKN5 801 aa18.34■□□□□ 0.53
PCDHB8-201ENST00000239444 ATP6V1DQ9Y5K8 247 aa18.34■□□□□ 0.53
PCDHB8-201ENST00000239444 HSP90AB4PQ58FF6 505 aa18.34■□□□□ 0.53
PCDHB8-201ENST00000239444 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
PCDHB8-201ENST00000239444 ZNF710Q8N1W2 664 aa18.34■□□□□ 0.53
PCDHB8-201ENST00000239444 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
PCDHB8-201ENST00000239444 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.33■□□□□ 0.53
PCDHB8-201ENST00000239444 KAZALD1Q96I82 304 aa18.33■□□□□ 0.53
PCDHB8-201ENST00000239444 LUZP1Q86V48 1076 aa18.33■□□□□ 0.52
PCDHB8-201ENST00000239444 BICC1Q9H694 974 aaKnown RBP18.33■□□□□ 0.52
PCDHB8-201ENST00000239444 NCAPD2Q15021 1401 aa18.32■□□□□ 0.52
PCDHB8-201ENST00000239444 AKAP4Q5JQC9 854 aa18.32■□□□□ 0.52
PCDHB8-201ENST00000239444 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
PCDHB8-201ENST00000239444 SLC27A2O14975 620 aa18.32■□□□□ 0.52
PCDHB8-201ENST00000239444 LETM1O95202 739 aaPredicted RBP18.32■□□□□ 0.52
PCDHB8-201ENST00000239444 ZKSCAN1P17029 563 aaPredicted RBP18.32■□□□□ 0.52
PCDHB8-201ENST00000239444 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
PCDHB8-201ENST00000239444 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
PCDHB8-201ENST00000239444 HOXB7P09629 217 aa18.31■□□□□ 0.52
PCDHB8-201ENST00000239444 PLEKHO1Q53GL0 409 aaPredicted RBP18.31■□□□□ 0.52
PCDHB8-201ENST00000239444 DDX17Q92841 729 aaKnown RBP18.31■□□□□ 0.52
PCDHB8-201ENST00000239444 EVI5LQ96CN4 794 aa18.31■□□□□ 0.52
PCDHB8-201ENST00000239444 DBF4Q9UBU7 674 aaPredicted RBP18.31■□□□□ 0.52
PCDHB8-201ENST00000239444 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
PCDHB8-201ENST00000239444 FSD1Q9BTV5 496 aa18.3■□□□□ 0.52
PCDHB8-201ENST00000239444 PXDNQ92626 1479 aa18.3■□□□□ 0.52
PCDHB8-201ENST00000239444 LARP1Q6PKG0 1096 aaKnown RBP18.3■□□□□ 0.52
PCDHB8-201ENST00000239444 SH2B1Q9NRF2 756 aaPredicted RBP18.3■□□□□ 0.52
PCDHB8-201ENST00000239444 MTX1Q13505 466 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 GPATCH3Q96I76 525 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 ZSCAN31Q96LW9 406 aaPredicted RBP18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 PTGS1P23219 599 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 PIP4K2AP48426 406 aaPredicted RBP18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 AMOTQ4VCS5 1084 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 MAP4K1Q92918 833 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 DDX11Q96FC9 970 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 DACT1Q9NYF0 836 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 CCDC9Q9Y3X0 531 aaKnown RBP18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 MRVI1Q9Y6F6 885 aa18.29■□□□□ 0.52
PCDHB8-201ENST00000239444 CAMTA1Q9Y6Y1 1673 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 JAK2O60674 1132 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 PPFIA3O75145 1194 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 CCDC192P0DO97 292 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 FOSBP53539 338 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 KRT85P78386 507 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 KIAA1524Q8TCG1 905 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 TM6SF1Q9BZW5 370 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 BCL11BQ9C0K0 894 aaPredicted RBP18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 RNMTO43148 476 aaKnown RBP18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 G3BP1Q13283 466 aaKnown RBP eCLIP18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 TOB2Q14106 344 aaPredicted RBP18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 KCNB2Q92953 911 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 NUP62CLQ9H1M0 184 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 NRBP1Q9UHY1 535 aa18.28■□□□□ 0.52
PCDHB8-201ENST00000239444 GRM8O00222 908 aa18.27■□□□□ 0.52
PCDHB8-201ENST00000239444 TYRO3Q06418 890 aa18.27■□□□□ 0.52
PCDHB8-201ENST00000239444 LRMPQ12912 555 aa18.27■□□□□ 0.52
PCDHB8-201ENST00000239444 SLC39A6Q13433 755 aa18.27■□□□□ 0.52
PCDHB8-201ENST00000239444 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
PCDHB8-201ENST00000239444 KRT28Q7Z3Y7 464 aa18.27■□□□□ 0.52
PCDHB8-201ENST00000239444 SPTLC3Q9NUV7 552 aa18.27■□□□□ 0.52
PCDHB8-201ENST00000239444 MYL6BP14649 208 aa18.27■□□□□ 0.51
PCDHB8-201ENST00000239444 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.51
PCDHB8-201ENST00000239444 LRRC2Q9BYS8 371 aa18.27■□□□□ 0.51
PCDHB8-201ENST00000239444 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms