RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ABCC6O95255 1503 aa21■□□□□ 0.95
CDKN1B-201ENST00000228872 ZNF75DP51815 510 aa21■□□□□ 0.95
CDKN1B-201ENST00000228872 CCDC83Q8IWF9 413 aa21■□□□□ 0.95
CDKN1B-201ENST00000228872 RTF1Q92541 710 aaKnown RBP21■□□□□ 0.95
CDKN1B-201ENST00000228872 CBX8Q9HC52 389 aa21■□□□□ 0.95
CDKN1B-201ENST00000228872 PLA2G4DQ86XP0 818 aa20.99■□□□□ 0.95
CDKN1B-201ENST00000228872 LSG1Q9H089 658 aaKnown RBP20.99■□□□□ 0.95
CDKN1B-201ENST00000228872 ZBTB22O15209 634 aa20.99■□□□□ 0.95
CDKN1B-201ENST00000228872 KRT222Q8N1A0 295 aa20.99■□□□□ 0.95
CDKN1B-201ENST00000228872 COL18A1P39060 1754 aa20.98■□□□□ 0.95
CDKN1B-201ENST00000228872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.98■□□□□ 0.95
CDKN1B-201ENST00000228872 DTNBO60941 627 aa20.98■□□□□ 0.95
CDKN1B-201ENST00000228872 LIG1P18858 919 aa20.98■□□□□ 0.95
CDKN1B-201ENST00000228872 CAMK4Q16566 473 aa20.98■□□□□ 0.95
CDKN1B-201ENST00000228872 TPD52L1Q16890 204 aaPredicted RBP20.98■□□□□ 0.95
CDKN1B-201ENST00000228872 MTHFSDQ2M296 383 aaKnown RBP20.98■□□□□ 0.95
CDKN1B-201ENST00000228872 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 GNAI3P08754 354 aa20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 CPA1P15085 419 aa20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 TTC6Q86TZ1 520 aa20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 TRIM5Q9C035 493 aa20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 VPS37CA5D8V6 355 aaPredicted RBP20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 MAP4K4O95819 1239 aaPredicted RBP20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 ANO6Q4KMQ2 910 aa20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 ZNF397Q8NF99 534 aaPredicted RBP20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 HYPKQ9NX55 129 aa20.97■□□□□ 0.95
CDKN1B-201ENST00000228872 CRB1P82279 1406 aa20.96■□□□□ 0.95
CDKN1B-201ENST00000228872 CCDC66A2RUB6 948 aa20.96■□□□□ 0.95
CDKN1B-201ENST00000228872 IL1RAPL2Q9NP60 686 aa20.96■□□□□ 0.95
CDKN1B-201ENST00000228872 CHMP3Q9Y3E7 222 aa20.96■□□□□ 0.95
CDKN1B-201ENST00000228872 LTBP4Q8N2S1 1624 aa20.96■□□□□ 0.95
CDKN1B-201ENST00000228872 KMT5BQ4FZB7 885 aa20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 CEP135Q66GS9 1140 aa20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 NUTM1Q86Y26 1132 aa20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 CACTINQ8WUQ7 758 aaKnown RBP20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 LTV1Q96GA3 475 aaPredicted RBP20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 MIS18AQ9NYP9 233 aa20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 LMO7Q8WWI1 1683 aa20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 CASTP20810 708 aaKnown RBP20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 CKAP2LQ8IYA6 745 aa20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 TDRD7Q8NHU6 1098 aaKnown RBP20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 LRRC37A3O60309 1634 aa20.95■□□□□ 0.94
CDKN1B-201ENST00000228872 FAM53CQ9NYF3 392 aa20.94■□□□□ 0.94
CDKN1B-201ENST00000228872 KCNJ4P48050 445 aa20.94■□□□□ 0.94
CDKN1B-201ENST00000228872 PDE4CQ08493 712 aa20.94■□□□□ 0.94
CDKN1B-201ENST00000228872 TNMDQ9H2S6 317 aa20.94■□□□□ 0.94
CDKN1B-201ENST00000228872 FAM208AQ9UK61 1670 aaKnown RBP20.94■□□□□ 0.94
CDKN1B-201ENST00000228872 ABCA3Q99758 1704 aa20.94■□□□□ 0.94
CDKN1B-201ENST00000228872 KRT85P78386 507 aa20.93■□□□□ 0.94
CDKN1B-201ENST00000228872 ST3GAL1Q11201 340 aa20.93■□□□□ 0.94
CDKN1B-201ENST00000228872 PI4K2BQ8TCG2 481 aa20.93■□□□□ 0.94
CDKN1B-201ENST00000228872 ZNF592Q92610 1267 aa20.93■□□□□ 0.94
CDKN1B-201ENST00000228872 ELP1O95163 1332 aa20.93■□□□□ 0.94
CDKN1B-201ENST00000228872 IRX5P78411 483 aaPredicted RBP20.93■□□□□ 0.94
CDKN1B-201ENST00000228872 LRRFIP2Q9Y608 721 aaKnown RBP20.93■□□□□ 0.94
CDKN1B-201ENST00000228872 CCDC144BQ3MJ40 725 aa20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 CCDC144CPQ8IYA2 1237 aa20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 ZSCAN31Q96LW9 406 aaPredicted RBP20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 SH2B1Q9NRF2 756 aaPredicted RBP20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 CLIP2Q9UDT6 1046 aa20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 NBPF6Q5VWK0 638 aa20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 NBPF4Q96M43 638 aa20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 PDRG1Q9NUG6 133 aa20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 DACT1Q9NYF0 836 aa20.92■□□□□ 0.94
CDKN1B-201ENST00000228872 VPS53Q5VIR6 699 aa20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 BCL11BQ9C0K0 894 aaPredicted RBP20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 ZNF215Q9UL58 517 aaPredicted RBP20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 RBM43Q6ZSC3 357 aaKnown RBP20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 SOS1Q07889 1333 aaPredicted RBP20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 CPDO75976 1380 aa20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 CCDC171Q6TFL3 1326 aa20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 SPG7Q9UQ90 795 aa20.91■□□□□ 0.94
CDKN1B-201ENST00000228872 CDC25BP30305 580 aa20.9■□□□□ 0.94
CDKN1B-201ENST00000228872 ANKRD24Q8TF21 1146 aa20.9■□□□□ 0.94
CDKN1B-201ENST00000228872 TIGD1Q96MW7 591 aa20.9■□□□□ 0.94
CDKN1B-201ENST00000228872 TSPYL4Q9UJ04 414 aa20.9■□□□□ 0.94
CDKN1B-201ENST00000228872 DDX19AQ9NUU7 478 aaKnown RBP20.9■□□□□ 0.94
CDKN1B-201ENST00000228872 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
CDKN1B-201ENST00000228872 AXIN2Q9Y2T1 843 aa20.9■□□□□ 0.94
CDKN1B-201ENST00000228872 FAM173BQ6P4H8 233 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 CNTROBQ8N137 903 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 JAKMIP1Q96N16 626 aaKnown RBP20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 CLSTN2Q9H4D0 955 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 USP27XA6NNY8 438 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 CDK11BP21127 795 aaKnown RBP20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 ZC3H6P61129 1189 aaKnown RBP20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 FLIIQ13045 1269 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 FBXO38Q6PIJ6 1188 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 CWC27Q6UX04 472 aaKnown RBP20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 CDC37L1Q7L3B6 337 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 FERMT3Q86UX7 667 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 STK31Q9BXU1 1019 aa20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 V9GYY5 206 aaPredicted RBP20.89■□□□□ 0.93
CDKN1B-201ENST00000228872 VGLL3A8MV65 326 aa20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 ZNF165P49910 485 aa20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 ME3Q16798 604 aa20.88■□□□□ 0.93
CDKN1B-201ENST00000228872 ADCK5Q3MIX3 580 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms