RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 RGL2O15211 777 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 GNAI3P08754 354 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 NBPF7P0C2Y1 421 aaPredicted RBP13.98□□□□□ -0.17
CTSC-201ENST00000227266 UBTFL1P0CB47 393 aaPredicted RBP13.98□□□□□ -0.17
CTSC-201ENST00000227266 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 UBE3BQ7Z3V4 1068 aa13.97□□□□□ -0.17
CTSC-201ENST00000227266 SETDB2Q96T68 719 aa13.97□□□□□ -0.17
CTSC-201ENST00000227266 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
CTSC-201ENST00000227266 SUSD4Q5VX71 490 aa13.96□□□□□ -0.17
CTSC-201ENST00000227266 TRMT112Q9UI30 125 aaKnown RBP13.96□□□□□ -0.17
CTSC-201ENST00000227266 NFIXQ14938 502 aa13.96□□□□□ -0.18
CTSC-201ENST00000227266 MSL1Q68DK7 614 aa13.96□□□□□ -0.18
CTSC-201ENST00000227266 FAM89AQ96GI7 184 aa13.96□□□□□ -0.18
CTSC-201ENST00000227266 PDGFDQ9GZP0 370 aaPredicted RBP13.96□□□□□ -0.18
CTSC-201ENST00000227266 GNAI2P04899 355 aa13.95□□□□□ -0.18
CTSC-201ENST00000227266 UTP14AQ9BVJ6 771 aaKnown RBP13.95□□□□□ -0.18
CTSC-201ENST00000227266 LRRFIP2Q9Y608 721 aaKnown RBP13.95□□□□□ -0.18
CTSC-201ENST00000227266 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
CTSC-201ENST00000227266 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
CTSC-201ENST00000227266 H7C1W4 665 aa13.94□□□□□ -0.18
CTSC-201ENST00000227266 AAMPQ13685 434 aa13.94□□□□□ -0.18
CTSC-201ENST00000227266 R3HDM1Q15032 1099 aaKnown RBP13.94□□□□□ -0.18
CTSC-201ENST00000227266 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
CTSC-201ENST00000227266 NLGN1Q8N2Q7 840 aa13.94□□□□□ -0.18
CTSC-201ENST00000227266 ZBTB38Q8NAP3 1195 aaPredicted RBP13.94□□□□□ -0.18
CTSC-201ENST00000227266 UTYO14607 1347 aa13.94□□□□□ -0.18
CTSC-201ENST00000227266 PCCAP05165 728 aaPredicted RBP13.94□□□□□ -0.18
CTSC-201ENST00000227266 NBPF5PQ86XG9 351 aaPredicted RBP13.94□□□□□ -0.18
CTSC-201ENST00000227266 SYNE4Q8N205 404 aa13.94□□□□□ -0.18
CTSC-201ENST00000227266 BCORQ6W2J9 1755 aa13.93□□□□□ -0.18
CTSC-201ENST00000227266 IBTKQ9P2D0 1353 aaPredicted RBP13.93□□□□□ -0.18
CTSC-201ENST00000227266 NPHP1O15259 732 aa13.93□□□□□ -0.18
CTSC-201ENST00000227266 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
CTSC-201ENST00000227266 B4GALNT3Q6L9W6 998 aa13.93□□□□□ -0.18
CTSC-201ENST00000227266 NUTM1Q86Y26 1132 aa13.93□□□□□ -0.18
CTSC-201ENST00000227266 SUCLG2Q96I99 432 aa13.93□□□□□ -0.18
CTSC-201ENST00000227266 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
CTSC-201ENST00000227266 CARMIL3Q8ND23 1372 aa13.92□□□□□ -0.18
CTSC-201ENST00000227266 NTSR2O95665 410 aa13.92□□□□□ -0.18
CTSC-201ENST00000227266 CASP7P55210 303 aa13.92□□□□□ -0.18
CTSC-201ENST00000227266 HDAC5Q9UQL6 1122 aa13.92□□□□□ -0.18
CTSC-201ENST00000227266 SH3TC1Q8TE82 1336 aa13.92□□□□□ -0.18
CTSC-201ENST00000227266 NUP98P52948 1817 aa13.92□□□□□ -0.18
CTSC-201ENST00000227266 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
CTSC-201ENST00000227266 PSDA5PKW4 1024 aaPredicted RBP13.92□□□□□ -0.18
CTSC-201ENST00000227266 TM4SF1P30408 202 aa13.92□□□□□ -0.18
CTSC-201ENST00000227266 IRS4O14654 1257 aaPredicted RBP13.91□□□□□ -0.18
CTSC-201ENST00000227266 MMP10P09238 476 aa13.91□□□□□ -0.18
CTSC-201ENST00000227266 DDR1Q08345 913 aa13.91□□□□□ -0.18
CTSC-201ENST00000227266 TPTE2Q6XPS3 522 aa13.91□□□□□ -0.18
CTSC-201ENST00000227266 NYXQ9GZU5 481 aa13.91□□□□□ -0.18
CTSC-201ENST00000227266 BICC1Q9H694 974 aaKnown RBP13.91□□□□□ -0.18
CTSC-201ENST00000227266 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
CTSC-201ENST00000227266 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
CTSC-201ENST00000227266 ERFEQ4G0M1 354 aa13.9□□□□□ -0.18
CTSC-201ENST00000227266 EPHA10Q5JZY3 1008 aa13.9□□□□□ -0.18
CTSC-201ENST00000227266 CCDC24Q8N4L8 307 aa13.9□□□□□ -0.18
CTSC-201ENST00000227266 KAZALD1Q96I82 304 aa13.9□□□□□ -0.18
CTSC-201ENST00000227266 CCDC136Q96JN2 1154 aa13.9□□□□□ -0.18
CTSC-201ENST00000227266 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
CTSC-201ENST00000227266 SERPINB2P05120 415 aa13.9□□□□□ -0.18
CTSC-201ENST00000227266 CEP85Q6P2H3 762 aa13.9□□□□□ -0.18
CTSC-201ENST00000227266 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
CTSC-201ENST00000227266 CDHR2Q9BYE9 1310 aa13.89□□□□□ -0.19
CTSC-201ENST00000227266 AFDNP55196 1824 aaKnown RBP13.89□□□□□ -0.19
CTSC-201ENST00000227266 ZBTB7AO95365 584 aa13.89□□□□□ -0.19
CTSC-201ENST00000227266 SLC16A10Q8TF71 515 aa13.89□□□□□ -0.19
CTSC-201ENST00000227266 PARP3Q9Y6F1 533 aa13.89□□□□□ -0.19
CTSC-201ENST00000227266 ANKRD36CQ5JPF3 1778 aa13.89□□□□□ -0.19
CTSC-201ENST00000227266 SIRT2Q8IXJ6 389 aa13.88□□□□□ -0.19
CTSC-201ENST00000227266 RPAP2Q8IXW5 612 aaPredicted RBP13.88□□□□□ -0.19
CTSC-201ENST00000227266 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
CTSC-201ENST00000227266 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
CTSC-201ENST00000227266 FOXO4P98177 505 aa13.88□□□□□ -0.19
CTSC-201ENST00000227266 PRR5LQ6MZQ0 368 aa13.88□□□□□ -0.19
CTSC-201ENST00000227266 LMBR1LQ6UX01 489 aa13.88□□□□□ -0.19
CTSC-201ENST00000227266 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
CTSC-201ENST00000227266 ABCC12Q96J65 1359 aa13.87□□□□□ -0.19
CTSC-201ENST00000227266 PNMA6EA0A0J9YXQ4 647 aa13.87□□□□□ -0.19
CTSC-201ENST00000227266 SRGAP3O43295 1099 aa13.87□□□□□ -0.19
CTSC-201ENST00000227266 PDE8AO60658 829 aa13.87□□□□□ -0.19
CTSC-201ENST00000227266 HSP90B1P14625 803 aaKnown RBP13.87□□□□□ -0.19
CTSC-201ENST00000227266 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
CTSC-201ENST00000227266 CTSWP56202 376 aa13.86□□□□□ -0.19
CTSC-201ENST00000227266 ST5P78524 1137 aa13.86□□□□□ -0.19
CTSC-201ENST00000227266 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
CTSC-201ENST00000227266 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
CTSC-201ENST00000227266 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
CTSC-201ENST00000227266 HMMRO75330 724 aa13.86□□□□□ -0.19
CTSC-201ENST00000227266 IGHDP01880 384 aa13.86□□□□□ -0.19
CTSC-201ENST00000227266 RABL6Q3YEC7 729 aaPredicted RBP13.86□□□□□ -0.19
CTSC-201ENST00000227266 QSER1Q2KHR3 1735 aa13.85□□□□□ -0.19
CTSC-201ENST00000227266 MTX1Q13505 466 aa13.85□□□□□ -0.19
CTSC-201ENST00000227266 SLC10A5Q5PT55 438 aa13.85□□□□□ -0.19
CTSC-201ENST00000227266 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
CTSC-201ENST00000227266 MTFR1LQ9H019 292 aa13.85□□□□□ -0.19
CTSC-201ENST00000227266 HDAC1Q13547 482 aaPredicted RBP13.84□□□□□ -0.19
CTSC-201ENST00000227266 FAM161AQ3B820 660 aa13.84□□□□□ -0.19
CTSC-201ENST00000227266 TTLL11Q8NHH1 800 aa13.84□□□□□ -0.19
CTSC-201ENST00000227266 NLRP3Q96P20 1036 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms