RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 NLRP10Q86W26 655 aa20.78■□□□□ 0.92
CHMP5-201ENST00000223500 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
CHMP5-201ENST00000223500 UTYO14607 1347 aa20.78■□□□□ 0.92
CHMP5-201ENST00000223500 QSER1Q2KHR3 1735 aa20.78■□□□□ 0.92
CHMP5-201ENST00000223500 COL23A1Q86Y22 540 aaPredicted RBP20.77■□□□□ 0.92
CHMP5-201ENST00000223500 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
CHMP5-201ENST00000223500 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
CHMP5-201ENST00000223500 PPP1R42Q7Z4L9 355 aa20.76■□□□□ 0.91
CHMP5-201ENST00000223500 H7C1W4 665 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 ILDR2Q71H61 639 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 CCDC136Q96JN2 1154 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 SETDB2Q96T68 719 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 PNPLA7Q6ZV29 1317 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 PCCAP05165 728 aaPredicted RBP20.75■□□□□ 0.91
CHMP5-201ENST00000223500 GYS1P13807 737 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 TBC1D9BQ66K14 1250 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 UBE3BQ7Z3V4 1068 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 ZBTB38Q8NAP3 1195 aaPredicted RBP20.75■□□□□ 0.91
CHMP5-201ENST00000223500 C1orf115Q9H7X2 142 aa20.75■□□□□ 0.91
CHMP5-201ENST00000223500 UBN2Q6ZU65 1347 aa20.74■□□□□ 0.91
CHMP5-201ENST00000223500 UTP14AQ9BVJ6 771 aaKnown RBP20.74■□□□□ 0.91
CHMP5-201ENST00000223500 TRMT112Q9UI30 125 aaKnown RBP20.74■□□□□ 0.91
CHMP5-201ENST00000223500 PCDHB15Q9Y5E8 787 aa20.74■□□□□ 0.91
CHMP5-201ENST00000223500 LRRFIP2Q9Y608 721 aaKnown RBP20.74■□□□□ 0.91
CHMP5-201ENST00000223500 BICDL1Q6ZP65 573 aa20.73■□□□□ 0.91
CHMP5-201ENST00000223500 RPAP2Q8IXW5 612 aaPredicted RBP20.73■□□□□ 0.91
CHMP5-201ENST00000223500 SUSD4Q5VX71 490 aa20.72■□□□□ 0.91
CHMP5-201ENST00000223500 NLGN1Q8N2Q7 840 aa20.72■□□□□ 0.91
CHMP5-201ENST00000223500 NYXQ9GZU5 481 aa20.72■□□□□ 0.91
CHMP5-201ENST00000223500 HSP90B1P14625 803 aaKnown RBP20.71■□□□□ 0.91
CHMP5-201ENST00000223500 CASP7P55210 303 aa20.71■□□□□ 0.91
CHMP5-201ENST00000223500 RWDD1Q9H446 243 aaPredicted RBP20.71■□□□□ 0.91
CHMP5-201ENST00000223500 SH3TC1Q8TE82 1336 aa20.7■□□□□ 0.9
CHMP5-201ENST00000223500 CDHR2Q9BYE9 1310 aa20.7■□□□□ 0.9
CHMP5-201ENST00000223500 FAM177BA6PVY3 158 aa20.7■□□□□ 0.9
CHMP5-201ENST00000223500 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
CHMP5-201ENST00000223500 ANKRD44Q8N8A2 993 aa20.7■□□□□ 0.9
CHMP5-201ENST00000223500 JARID2Q92833 1246 aaPredicted RBP20.7■□□□□ 0.9
CHMP5-201ENST00000223500 FAM89AQ96GI7 184 aa20.7■□□□□ 0.9
CHMP5-201ENST00000223500 SUCLG2Q96I99 432 aa20.7■□□□□ 0.9
CHMP5-201ENST00000223500 CARMIL3Q8ND23 1372 aa20.7■□□□□ 0.9
CHMP5-201ENST00000223500 HMMRO75330 724 aa20.69■□□□□ 0.9
CHMP5-201ENST00000223500 GTF2E1P29083 439 aaPredicted RBP20.69■□□□□ 0.9
CHMP5-201ENST00000223500 NFIXQ14938 502 aa20.69■□□□□ 0.9
CHMP5-201ENST00000223500 B4GALNT3Q6L9W6 998 aa20.69■□□□□ 0.9
CHMP5-201ENST00000223500 CEP85Q6P2H3 762 aa20.69■□□□□ 0.9
CHMP5-201ENST00000223500 COL24A1Q17RW2 1714 aa20.69■□□□□ 0.9
CHMP5-201ENST00000223500 NTSR2O95665 410 aa20.69■□□□□ 0.9
CHMP5-201ENST00000223500 TPTE2Q6XPS3 522 aa20.69■□□□□ 0.9
CHMP5-201ENST00000223500 NBPF5PQ86XG9 351 aaPredicted RBP20.69■□□□□ 0.9
CHMP5-201ENST00000223500 ATP8B2P98198 1209 aa20.68■□□□□ 0.9
CHMP5-201ENST00000223500 HDAC1Q13547 482 aaPredicted RBP20.68■□□□□ 0.9
CHMP5-201ENST00000223500 IRS4O14654 1257 aaPredicted RBP20.67■□□□□ 0.9
CHMP5-201ENST00000223500 NPHP1O15259 732 aa20.67■□□□□ 0.9
CHMP5-201ENST00000223500 TM4SF1P30408 202 aa20.67■□□□□ 0.9
CHMP5-201ENST00000223500 PLA2G12BQ9BX93 195 aa20.67■□□□□ 0.9
CHMP5-201ENST00000223500 BICC1Q9H694 974 aaKnown RBP20.67■□□□□ 0.9
CHMP5-201ENST00000223500 SLC16A10Q8TF71 515 aa20.66■□□□□ 0.9
CHMP5-201ENST00000223500 KAZALD1Q96I82 304 aa20.66■□□□□ 0.9
CHMP5-201ENST00000223500 MYH3P11055 1940 aa20.66■□□□□ 0.9
CHMP5-201ENST00000223500 PDE8AO60658 829 aa20.65■□□□□ 0.9
CHMP5-201ENST00000223500 MTX1Q13505 466 aa20.65■□□□□ 0.9
CHMP5-201ENST00000223500 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.89
CHMP5-201ENST00000223500 SIRT2Q8IXJ6 389 aa20.64■□□□□ 0.89
CHMP5-201ENST00000223500 SRGAP3O43295 1099 aa20.63■□□□□ 0.89
CHMP5-201ENST00000223500 SERPINB2P05120 415 aa20.63■□□□□ 0.89
CHMP5-201ENST00000223500 FOXO4P98177 505 aa20.63■□□□□ 0.89
CHMP5-201ENST00000223500 RABL6Q3YEC7 729 aaPredicted RBP20.63■□□□□ 0.89
CHMP5-201ENST00000223500 EPHA10Q5JZY3 1008 aa20.63■□□□□ 0.89
CHMP5-201ENST00000223500 SYNE4Q8N205 404 aa20.63■□□□□ 0.89
CHMP5-201ENST00000223500 CNBD1Q8NA66 436 aa20.63■□□□□ 0.89
CHMP5-201ENST00000223500 IGHDP01880 384 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 ERFEQ4G0M1 354 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 SLC10A5Q5PT55 438 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 LMBR1LQ6UX01 489 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 CENPQQ7L2Z9 268 aaPredicted RBP20.62■□□□□ 0.89
CHMP5-201ENST00000223500 CHMP3Q9Y3E7 222 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 PARP3Q9Y6F1 533 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 LAMB2P55268 1798 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 PNMA6EA0A0J9YXQ4 647 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 POLRMTO00411 1230 aaKnown RBP20.62■□□□□ 0.89
CHMP5-201ENST00000223500 HCLS1P14317 486 aaPredicted RBP20.62■□□□□ 0.89
CHMP5-201ENST00000223500 MSL1Q68DK7 614 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 SSH3Q8TE77 659 aa20.62■□□□□ 0.89
CHMP5-201ENST00000223500 MMP10P09238 476 aa20.61■□□□□ 0.89
CHMP5-201ENST00000223500 CTSWP56202 376 aa20.61■□□□□ 0.89
CHMP5-201ENST00000223500 ST5P78524 1137 aa20.61■□□□□ 0.89
CHMP5-201ENST00000223500 DDR1Q08345 913 aa20.61■□□□□ 0.89
CHMP5-201ENST00000223500 POLA2Q14181 598 aa20.61■□□□□ 0.89
CHMP5-201ENST00000223500 DDX60Q8IY21 1712 aaKnown RBP20.6■□□□□ 0.89
CHMP5-201ENST00000223500 CSF1RP07333 972 aa20.6■□□□□ 0.89
CHMP5-201ENST00000223500 R3HDM1Q15032 1099 aaKnown RBP20.6■□□□□ 0.89
CHMP5-201ENST00000223500 PRR5LQ6MZQ0 368 aa20.59■□□□□ 0.89
CHMP5-201ENST00000223500 GCC1Q96CN9 775 aa20.59■□□□□ 0.89
CHMP5-201ENST00000223500 NLRP3Q96P20 1036 aa20.59■□□□□ 0.89
CHMP5-201ENST00000223500 CCDC57Q2TAC2 916 aa20.58■□□□□ 0.89
CHMP5-201ENST00000223500 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
CHMP5-201ENST00000223500 TTLL11Q8NHH1 800 aa20.58■□□□□ 0.89
CHMP5-201ENST00000223500 PDGFDQ9GZP0 370 aaPredicted RBP20.58■□□□□ 0.89
CHMP5-201ENST00000223500 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms