RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 TRMT112Q9UI30 125 aaKnown RBP18.75■□□□□ 0.59
PCOLCE-201ENST00000223061 GOLGB1Q14789 3259 aaKnown RBP18.75■□□□□ 0.59
PCOLCE-201ENST00000223061 YBX3P16989 372 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCOLCE-201ENST00000223061 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
PCOLCE-201ENST00000223061 ARFGEF2Q9Y6D5 1785 aa18.74■□□□□ 0.59
PCOLCE-201ENST00000223061 PIM2Q9P1W9 311 aa18.74■□□□□ 0.59
PCOLCE-201ENST00000223061 N4BP2Q86UW6 1770 aaPredicted RBP18.74■□□□□ 0.59
PCOLCE-201ENST00000223061 KIAA1551Q9HCM1 1747 aa18.73■□□□□ 0.59
PCOLCE-201ENST00000223061 F6X3S4 739 aa18.73■□□□□ 0.59
PCOLCE-201ENST00000223061 NEXNQ0ZGT2 675 aa18.73■□□□□ 0.59
PCOLCE-201ENST00000223061 TRIM28Q13263 835 aaKnown RBP18.73■□□□□ 0.59
PCOLCE-201ENST00000223061 ALDH1L2Q3SY69 923 aa18.73■□□□□ 0.59
PCOLCE-201ENST00000223061 SYNE4Q8N205 404 aa18.73■□□□□ 0.59
PCOLCE-201ENST00000223061 DNAAF4Q8WXU2 420 aa18.73■□□□□ 0.59
PCOLCE-201ENST00000223061 ZNF622Q969S3 477 aaKnown RBP eCLIP18.73■□□□□ 0.594e-11■■■■■ 31.2
PCOLCE-201ENST00000223061 BCS1LQ9Y276 419 aa18.73■□□□□ 0.59
PCOLCE-201ENST00000223061 RTL5Q5HYW3 569 aaPredicted RBP18.72■□□□□ 0.59
PCOLCE-201ENST00000223061 ANKRD36CQ5JPF3 1778 aa18.72■□□□□ 0.59
PCOLCE-201ENST00000223061 SH3TC1Q8TE82 1336 aa18.72■□□□□ 0.59
PCOLCE-201ENST00000223061 FAM89AQ96GI7 184 aa18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 CWC25Q9NXE8 425 aaPredicted RBP18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 IGKV5-2P06315 115 aa18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 HCLS1P14317 486 aaPredicted RBP18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 CWF19L2Q2TBE0 894 aaKnown RBP18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 DALRD3Q5D0E6 543 aaKnown RBP18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 CCDC191Q8NCU4 936 aa18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 ANKRD31Q8N7Z5 1873 aa18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 RNF123Q5XPI4 1314 aa18.71■□□□□ 0.59
PCOLCE-201ENST00000223061 SRGNP10124 158 aa18.7■□□□□ 0.58
PCOLCE-201ENST00000223061 RARSP54136 660 aaKnown RBP18.7■□□□□ 0.58
PCOLCE-201ENST00000223061 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
PCOLCE-201ENST00000223061 JARID2Q92833 1246 aaPredicted RBP18.69■□□□□ 0.58
PCOLCE-201ENST00000223061 KLRG2A4D1S0 409 aaPredicted RBP18.69■□□□□ 0.58
PCOLCE-201ENST00000223061 NEURL1BA8MQ27 555 aa18.69■□□□□ 0.58
PCOLCE-201ENST00000223061 SLC10A5Q5PT55 438 aa18.69■□□□□ 0.58
PCOLCE-201ENST00000223061 SLC4A10Q6U841 1118 aa18.69■□□□□ 0.58
PCOLCE-201ENST00000223061 TTLL6Q8N841 843 aa18.69■□□□□ 0.58
PCOLCE-201ENST00000223061 MASTLQ96GX5 879 aa18.69■□□□□ 0.58
PCOLCE-201ENST00000223061 UTRNP46939 3433 aa18.68■□□□□ 0.58
PCOLCE-201ENST00000223061 TNRC6CQ9HCJ0 1690 aaKnown RBP18.68■□□□□ 0.58
PCOLCE-201ENST00000223061 NPR1P16066 1061 aa18.68■□□□□ 0.58
PCOLCE-201ENST00000223061 STYK1Q6J9G0 422 aa18.68■□□□□ 0.58
PCOLCE-201ENST00000223061 ZBTB38Q8NAP3 1195 aaPredicted RBP18.68■□□□□ 0.58
PCOLCE-201ENST00000223061 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
PCOLCE-201ENST00000223061 PTPRCP08575 1304 aa18.68■□□□□ 0.58
PCOLCE-201ENST00000223061 COL11A2P13942 1736 aaPredicted RBP18.67■□□□□ 0.58
PCOLCE-201ENST00000223061 GRIN3BO60391 1043 aa18.67■□□□□ 0.58
PCOLCE-201ENST00000223061 LINS1Q8NG48 757 aa18.67■□□□□ 0.58
PCOLCE-201ENST00000223061 RPGRQ92834 1020 aaKnown RBP18.67■□□□□ 0.58
PCOLCE-201ENST00000223061 RIC1Q4ADV7 1423 aa18.67■□□□□ 0.58
PCOLCE-201ENST00000223061 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
PCOLCE-201ENST00000223061 CRY2Q49AN0 593 aa18.66■□□□□ 0.58
PCOLCE-201ENST00000223061 NOB1Q9ULX3 412 aaKnown RBP18.66■□□□□ 0.58
PCOLCE-201ENST00000223061 PCCAP05165 728 aaPredicted RBP18.66■□□□□ 0.58
PCOLCE-201ENST00000223061 BEND3Q5T5X7 828 aa18.66■□□□□ 0.58
PCOLCE-201ENST00000223061 CNKSR1Q969H4 720 aa18.66■□□□□ 0.58
PCOLCE-201ENST00000223061 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
PCOLCE-201ENST00000223061 CACNA1FO60840 1977 aa18.65■□□□□ 0.58
PCOLCE-201ENST00000223061 GCKRQ14397 625 aa18.65■□□□□ 0.58
PCOLCE-201ENST00000223061 BCAR3O75815 825 aa18.64■□□□□ 0.57
PCOLCE-201ENST00000223061 PRPF40BQ6NWY9 871 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-201ENST00000223061 ARHGAP27Q6ZUM4 889 aa18.63■□□□□ 0.57
PCOLCE-201ENST00000223061 UBE3BQ7Z3V4 1068 aa18.63■□□□□ 0.57
PCOLCE-201ENST00000223061 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
PCOLCE-201ENST00000223061 BRPF1P55201 1214 aaPredicted RBP18.63■□□□□ 0.57
PCOLCE-201ENST00000223061 RBM17Q96I25 401 aaKnown RBP18.63■□□□□ 0.57
PCOLCE-201ENST00000223061 SRCIN1Q9C0H9 1055 aa18.63■□□□□ 0.57
PCOLCE-201ENST00000223061 BRCA1P38398 1863 aaKnown RBP18.62■□□□□ 0.57
PCOLCE-201ENST00000223061 KIF16BQ96L93 1317 aa18.62■□□□□ 0.57
PCOLCE-201ENST00000223061 C21orf2O43822 256 aa18.62■□□□□ 0.57
PCOLCE-201ENST00000223061 H7C1W4 665 aa18.61■□□□□ 0.57
PCOLCE-201ENST00000223061 HSP90B1P14625 803 aaKnown RBP18.61■□□□□ 0.57
PCOLCE-201ENST00000223061 ALDH1B1P30837 517 aa18.61■□□□□ 0.57
PCOLCE-201ENST00000223061 HOXA10P31260 410 aaPredicted RBP18.61■□□□□ 0.57
PCOLCE-201ENST00000223061 FRAT1Q92837 279 aaPredicted RBP18.61■□□□□ 0.57
PCOLCE-201ENST00000223061 CDHR2Q9BYE9 1310 aa18.61■□□□□ 0.57
PCOLCE-201ENST00000223061 API5Q9BZZ5 524 aaKnown RBP18.6■□□□□ 0.57
PCOLCE-201ENST00000223061 PDE8AO60658 829 aa18.6■□□□□ 0.57
PCOLCE-201ENST00000223061 ALDH1L1O75891 902 aa18.6■□□□□ 0.57
PCOLCE-201ENST00000223061 DDX46Q7L014 1031 aaKnown RBP18.6■□□□□ 0.57
PCOLCE-201ENST00000223061 CRAMP1Q96RY5 1269 aa18.6■□□□□ 0.57
PCOLCE-201ENST00000223061 SF3B3Q15393 1217 aaKnown RBP18.59■□□□□ 0.57
PCOLCE-201ENST00000223061 CCDC85AQ96PX6 553 aaPredicted RBP18.59■□□□□ 0.57
PCOLCE-201ENST00000223061 C9orf78Q9NZ63 289 aaPredicted RBP18.59■□□□□ 0.57
PCOLCE-201ENST00000223061 DDX60Q8IY21 1712 aaKnown RBP18.59■□□□□ 0.57
PCOLCE-201ENST00000223061 ABCC4O15439 1325 aa18.58■□□□□ 0.57
PCOLCE-201ENST00000223061 CASP7P55210 303 aa18.58■□□□□ 0.57
PCOLCE-201ENST00000223061 GRM8O00222 908 aa18.57■□□□□ 0.56
PCOLCE-201ENST00000223061 IPO8O15397 1037 aaKnown RBP18.57■□□□□ 0.56
PCOLCE-201ENST00000223061 OLFM4Q6UX06 510 aa18.57■□□□□ 0.56
PCOLCE-201ENST00000223061 PPEF1O14829 653 aaPredicted RBP18.57■□□□□ 0.56
PCOLCE-201ENST00000223061 CTSWP56202 376 aa18.57■□□□□ 0.56
PCOLCE-201ENST00000223061 ARHGAP45Q92619 1136 aa18.57■□□□□ 0.56
PCOLCE-201ENST00000223061 CCDC152Q4G0S7 254 aa18.56■□□□□ 0.56
PCOLCE-201ENST00000223061 SLC51AQ86UW1 340 aa18.56■□□□□ 0.56
PCOLCE-201ENST00000223061 C7orf43Q8WVR3 580 aa18.56■□□□□ 0.56
PCOLCE-201ENST00000223061 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
PCOLCE-201ENST00000223061 SLX4Q8IY92 1834 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms