RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 TTC21AQ8NDW8 1320 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 SFPQP23246 707 aaKnown RBP eCLIP12.78□□□□□ -0.36
KNOP1-201ENST00000219837 MCM3P25205 808 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 FAM114A1Q8IWE2 563 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 LDHCP07864 332 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 PLS1Q14651 629 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 LDHAL6AQ6ZMR3 332 aa12.77□□□□□ -0.36
KNOP1-201ENST00000219837 TSNARE1Q96NA8 513 aa12.77□□□□□ -0.36
KNOP1-201ENST00000219837 GBP3Q9H0R5 595 aa12.77□□□□□ -0.36
KNOP1-201ENST00000219837 UBXN4Q92575 508 aa12.77□□□□□ -0.36
KNOP1-201ENST00000219837 EXOC1Q9NV70 894 aa12.77□□□□□ -0.36
KNOP1-201ENST00000219837 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.36
KNOP1-201ENST00000219837 FBXO31Q5XUX0 539 aaPredicted RBP12.77□□□□□ -0.37
KNOP1-201ENST00000219837 SYNCQ9H7C4 482 aa12.77□□□□□ -0.37
KNOP1-201ENST00000219837 BIN1O00499 593 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 TBCAO75347 108 aaKnown RBP12.76□□□□□ -0.37
KNOP1-201ENST00000219837 URI1O94763 535 aaPredicted RBP12.76□□□□□ -0.37
KNOP1-201ENST00000219837 SSX2IPQ9Y2D8 614 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 PPFIA3O75145 1194 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 NOP2P46087 812 aaKnown RBP12.76□□□□□ -0.37
KNOP1-201ENST00000219837 TMC6Q7Z403 805 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 NCOA7Q8NI08 942 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 SSH1Q8WYL5 1049 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 ABCC5O15440 1437 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 HEATR3Q7Z4Q2 680 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 TBC1D5Q92609 795 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
KNOP1-201ENST00000219837 CTAGE5O15320 804 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 MCM4P33991 863 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 MAP3K9P80192 1104 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 SCAND2PQ9GZW5 306 aaPredicted RBP12.75□□□□□ -0.37
KNOP1-201ENST00000219837 IARSP41252 1262 aaKnown RBP12.75□□□□□ -0.37
KNOP1-201ENST00000219837 MICU3Q86XE3 530 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 ABCC11Q96J66 1382 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 IFIT1BQ5T764 474 aaKnown RBP12.75□□□□□ -0.37
KNOP1-201ENST00000219837 CCDC174Q6PII3 467 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 PANK2Q9BZ23 570 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 IDEP14735 1019 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 STX1AQ16623 288 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 TRMT1Q9NXH9 659 aaKnown RBP12.75□□□□□ -0.37
KNOP1-201ENST00000219837 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 FERP16591 822 aa12.75□□□□□ -0.37
KNOP1-201ENST00000219837 RARSP54136 660 aaKnown RBP12.75□□□□□ -0.37
KNOP1-201ENST00000219837 PIK3R4Q99570 1358 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 CCDC184Q52MB2 194 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 UTP14AQ9BVJ6 771 aaKnown RBP12.74□□□□□ -0.37
KNOP1-201ENST00000219837 NOS1P29475 1434 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 PAFAH1B1P43034 410 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 FLIIQ13045 1269 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 C8orf37Q96NL8 207 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 LRRC27Q9C0I9 530 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 RNF187Q5TA31 235 aaPredicted RBP12.74□□□□□ -0.37
KNOP1-201ENST00000219837 RGS22Q8NE09 1264 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 MSH6P52701 1360 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
KNOP1-201ENST00000219837 CALM1P0DP23 149 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 CALM2P0DP24 149 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 CALM3P0DP25 149 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 CYP7A1P22680 504 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
KNOP1-201ENST00000219837 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 WWC3Q9ULE0 1092 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 TERF1P54274 439 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 HLTFQ14527 1009 aaKnown RBP eCLIP12.73□□□□□ -0.372e-7■■□□□ 13.8
KNOP1-201ENST00000219837 SMC1AQ14683 1233 aaKnown RBP12.73□□□□□ -0.37
KNOP1-201ENST00000219837 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 PHACTR2O75167 634 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 UQCRFS1P1P0C7P4 283 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 GIMAP7Q8NHV1 300 aa12.73□□□□□ -0.37
KNOP1-201ENST00000219837 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
KNOP1-201ENST00000219837 WTAPQ15007 396 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 RBM26Q5T8P6 1007 aaKnown RBP12.72□□□□□ -0.37
KNOP1-201ENST00000219837 UBE3BQ7Z3V4 1068 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 PPM1EQ8WY54 764 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 PYM1Q9BRP8 204 aaKnown RBP12.72□□□□□ -0.37
KNOP1-201ENST00000219837 VEZTQ9HBM0 779 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 TMEM110-MUSTN1A8MSY1 372 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 SSFA2P28290 1259 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 ZGPATQ8N5A5 531 aaKnown RBP12.72□□□□□ -0.37
KNOP1-201ENST00000219837 OTUD6BQ8N6M0 293 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.72□□□□□ -0.37
KNOP1-201ENST00000219837 MAATS1Q7Z4T9 603 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 LRRC45Q96CN5 670 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms