RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
SNU13-201ENST00000215956 AIDAQ96BJ3 306 aa15.54■□□□□ 0.08
SNU13-201ENST00000215956 THUMPD2Q9BTF0 503 aaKnown RBP15.54■□□□□ 0.08
SNU13-201ENST00000215956 TBC1D2BQ9UPU7 963 aa15.54■□□□□ 0.08
SNU13-201ENST00000215956 NPHP1O15259 732 aa15.53■□□□□ 0.08
SNU13-201ENST00000215956 SOGA3Q5TF21 947 aa15.53■□□□□ 0.08
SNU13-201ENST00000215956 STYK1Q6J9G0 422 aa15.53■□□□□ 0.08
SNU13-201ENST00000215956 FTSJ3Q8IY81 847 aaKnown RBP15.53■□□□□ 0.08
SNU13-201ENST00000215956 CHMP4AQ9BY43 222 aa15.53■□□□□ 0.08
SNU13-201ENST00000215956 CHMP4BQ9H444 224 aaKnown RBP15.53■□□□□ 0.08
SNU13-201ENST00000215956 HEG1Q9ULI3 1381 aa15.53■□□□□ 0.08
SNU13-201ENST00000215956 IL6STP40189 918 aaPredicted RBP15.52■□□□□ 0.08
SNU13-201ENST00000215956 CTCFP49711 727 aaPredicted RBP15.52■□□□□ 0.08
SNU13-201ENST00000215956 TWISTNBQ3B726 338 aaPredicted RBP15.52■□□□□ 0.08
SNU13-201ENST00000215956 MCM10Q7L590 875 aa15.52■□□□□ 0.08
SNU13-201ENST00000215956 ZNF496Q96IT1 587 aaPredicted RBP15.52■□□□□ 0.08
SNU13-201ENST00000215956 L3MBTL3Q96JM7 780 aaPredicted RBP15.52■□□□□ 0.08
SNU13-201ENST00000215956 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
SNU13-201ENST00000215956 ADAMTSL1Q8N6G6 1762 aa15.52■□□□□ 0.07
SNU13-201ENST00000215956 VAMP4O75379 141 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 SRGNP10124 158 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 VEGFBP49765 207 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 ST5P78524 1137 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 DCTN1Q14203 1278 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 C20orf194Q5TEA3 1177 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 SSH1Q8WYL5 1049 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 MASTLQ96GX5 879 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 SETDB2Q96T68 719 aa15.51■□□□□ 0.07
SNU13-201ENST00000215956 TEX13AQ9BXU3 409 aaPredicted RBP15.51■□□□□ 0.07
SNU13-201ENST00000215956 TMEM88BA6NKF7 163 aa15.5■□□□□ 0.07
SNU13-201ENST00000215956 DZIP1LQ8IYY4 767 aaKnown RBP15.5■□□□□ 0.07
SNU13-201ENST00000215956 ARHGAP45Q92619 1136 aa15.5■□□□□ 0.07
SNU13-201ENST00000215956 CAMTA2O94983 1202 aa15.5■□□□□ 0.07
SNU13-201ENST00000215956 ZNF790Q6PG37 636 aa15.5■□□□□ 0.07
SNU13-201ENST00000215956 ATF7IPQ6VMQ6 1270 aa15.5■□□□□ 0.07
SNU13-201ENST00000215956 TSPYL4Q9UJ04 414 aa15.5■□□□□ 0.07
SNU13-201ENST00000215956 DLG5Q8TDM6 1919 aa15.49■□□□□ 0.07
SNU13-201ENST00000215956 TEFQ10587 303 aa15.49■□□□□ 0.07
SNU13-201ENST00000215956 NPM2Q86SE8 214 aaKnown RBP15.49■□□□□ 0.07
SNU13-201ENST00000215956 BCL2L13Q9BXK5 485 aa15.49■□□□□ 0.07
SNU13-201ENST00000215956 ITGBL1O95965 494 aaPredicted RBP15.48■□□□□ 0.07
SNU13-201ENST00000215956 LBX1P52954 281 aa15.48■□□□□ 0.07
SNU13-201ENST00000215956 TAF7Q15545 349 aaPredicted RBP15.48■□□□□ 0.07
SNU13-201ENST00000215956 CCDC93Q567U6 631 aa15.48■□□□□ 0.07
SNU13-201ENST00000215956 EAPPQ56P03 285 aaPredicted RBP15.48■□□□□ 0.07
SNU13-201ENST00000215956 WBP1LQ9NX94 342 aa15.48■□□□□ 0.07
SNU13-201ENST00000215956 ZNF541Q9H0D2 1346 aa15.48■□□□□ 0.07
SNU13-201ENST00000215956 A1BGP04217 495 aa15.47■□□□□ 0.07
SNU13-201ENST00000215956 CENPQQ7L2Z9 268 aaPredicted RBP15.47■□□□□ 0.07
SNU13-201ENST00000215956 C7orf43Q8WVR3 580 aa15.47■□□□□ 0.07
SNU13-201ENST00000215956 MVPQ14764 893 aaKnown RBP15.46■□□□□ 0.07
SNU13-201ENST00000215956 DZIP3Q86Y13 1208 aaKnown RBP15.46■□□□□ 0.07
SNU13-201ENST00000215956 IL17REQ8NFR9 667 aa15.46■□□□□ 0.07
SNU13-201ENST00000215956 FMNL2Q96PY5 1086 aa15.46■□□□□ 0.07
SNU13-201ENST00000215956 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.07
SNU13-201ENST00000215956 HACL1Q9UJ83 578 aa15.46■□□□□ 0.07
SNU13-201ENST00000215956 NOB1Q9ULX3 412 aaKnown RBP15.46■□□□□ 0.07
SNU13-201ENST00000215956 DDX19BQ9UMR2 479 aa15.46■□□□□ 0.07
SNU13-201ENST00000215956 SLC34A2O95436 690 aa15.46■□□□□ 0.06
SNU13-201ENST00000215956 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.06
SNU13-201ENST00000215956 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.06
SNU13-201ENST00000215956 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.06
SNU13-201ENST00000215956 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.06
SNU13-201ENST00000215956 COG6Q9Y2V7 657 aa15.46■□□□□ 0.06
SNU13-201ENST00000215956 CEMIPQ8WUJ3 1361 aa15.45■□□□□ 0.06
SNU13-201ENST00000215956 RASSF10A6NK89 507 aa15.45■□□□□ 0.06
SNU13-201ENST00000215956 EPHX2P34913 555 aa15.45■□□□□ 0.06
SNU13-201ENST00000215956 NBPF5PQ86XG9 351 aaPredicted RBP15.45■□□□□ 0.06
SNU13-201ENST00000215956 C8orf58Q8NAV2 365 aa15.45■□□□□ 0.06
SNU13-201ENST00000215956 PANK1Q8TE04 598 aa15.45■□□□□ 0.06
SNU13-201ENST00000215956 ZNF277Q9NRM2 450 aaPredicted RBP15.45■□□□□ 0.06
SNU13-201ENST00000215956 HSPA8P11142 646 aaKnown RBP15.44■□□□□ 0.06
SNU13-201ENST00000215956 NPR1P16066 1061 aa15.44■□□□□ 0.06
SNU13-201ENST00000215956 TRIM27P14373 513 aa15.43■□□□□ 0.06
SNU13-201ENST00000215956 DEFB115Q30KQ5 88 aa15.43■□□□□ 0.06
SNU13-201ENST00000215956 PNMA8AQ86V59 439 aaPredicted RBP15.43■□□□□ 0.06
SNU13-201ENST00000215956 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
SNU13-201ENST00000215956 ABHD8Q96I13 439 aa15.43■□□□□ 0.06
SNU13-201ENST00000215956 THSD7BQ9C0I4 1608 aa15.43■□□□□ 0.06
SNU13-201ENST00000215956 MAP1SQ66K74 1059 aaPredicted RBP15.43■□□□□ 0.06
SNU13-201ENST00000215956 CLEC4GQ6UXB4 293 aa15.43■□□□□ 0.06
SNU13-201ENST00000215956 CNTROBQ8N137 903 aa15.43■□□□□ 0.06
SNU13-201ENST00000215956 PTPRCP08575 1304 aa15.42■□□□□ 0.06
SNU13-201ENST00000215956 HOXB7P09629 217 aa15.42■□□□□ 0.06
SNU13-201ENST00000215956 PIP4K2AP48426 406 aaPredicted RBP15.42■□□□□ 0.06
SNU13-201ENST00000215956 MAP2K1Q02750 393 aaPredicted RBP15.42■□□□□ 0.06
SNU13-201ENST00000215956 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
SNU13-201ENST00000215956 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
SNU13-201ENST00000215956 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
SNU13-201ENST00000215956 ZNF652Q9Y2D9 606 aa15.42■□□□□ 0.06
SNU13-201ENST00000215956 WDR33Q9C0J8 1336 aaKnown RBP15.42■□□□□ 0.06
SNU13-201ENST00000215956 TRPM7Q96QT4 1865 aa15.41■□□□□ 0.06
SNU13-201ENST00000215956 KLRG2A4D1S0 409 aaPredicted RBP15.41■□□□□ 0.06
SNU13-201ENST00000215956 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
SNU13-201ENST00000215956 KCNQ3O43525 872 aa15.41■□□□□ 0.06
SNU13-201ENST00000215956 STK31Q9BXU1 1019 aa15.41■□□□□ 0.06
SNU13-201ENST00000215956 ABT1Q9ULW3 272 aaKnown RBP15.41■□□□□ 0.06
SNU13-201ENST00000215956 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
SNU13-201ENST00000215956 FZD9O00144 591 aa15.4■□□□□ 0.06
SNU13-201ENST00000215956 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms