RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.1
TGFBR3-201ENST00000212355 TBC1D32Q96NH3 1257 aa15.71■□□□□ 0.1
TGFBR3-201ENST00000212355 TTC12Q9H892 705 aaPredicted RBP15.71■□□□□ 0.1
TGFBR3-201ENST00000212355 ARID5AQ03989 594 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 GPIHBP1Q8IV16 184 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 SH2B1Q9NRF2 756 aaPredicted RBP15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 SAMM50Q9Y512 469 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 CPA1P15085 419 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 IQCA1Q86XH1 822 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 TSPY2A6NKD2 308 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 CCDC40Q4G0X9 1142 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 DNAJC25Q9H1X3 360 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 GNG11P61952 73 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 CTR9Q6PD62 1173 aa15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 RPGRQ92834 1020 aaKnown RBP15.7■□□□□ 0.1
TGFBR3-201ENST00000212355 NOS1P29475 1434 aa15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 C8orf58Q8NAV2 365 aa15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 EPRSP07814 1512 aaKnown RBP15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 KLF18A0A0U1RQI7 1052 aa15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 IARSP41252 1262 aaKnown RBP15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 Q6ZUG5 572 aa15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 ZGPATQ8N5A5 531 aaKnown RBP15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 PRC1O43663 620 aa15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 SPECC1Q5M775 1068 aa15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 AKNAD1Q5T1N1 836 aa15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 ECHDC1Q9NTX5 307 aa15.69■□□□□ 0.1
TGFBR3-201ENST00000212355 TMEM110-MUSTN1A8MSY1 372 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 AOPEPQ8N6M6 819 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 PLB1Q6P1J6 1458 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 YEATS4O95619 227 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 PPM1FP49593 454 aaPredicted RBP15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 TXLNBQ8N3L3 684 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 PICALMQ13492 652 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 FAM135AQ9P2D6 1515 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 CAPZA3Q96KX2 299 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 UIMC1Q96RL1 719 aa15.68■□□□□ 0.1
TGFBR3-201ENST00000212355 PPP1R12BO60237 982 aaPredicted RBP15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 NUCB1Q02818 461 aa15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 GJC1P36383 396 aa15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 MFSD6Q6ZSS7 791 aa15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 WASLO00401 505 aaPredicted RBP15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 PAIP2Q9BPZ3 127 aaKnown RBP15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 PRIM1P49642 420 aaKnown RBP15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 DBF4Q9UBU7 674 aaPredicted RBP15.67■□□□□ 0.1
TGFBR3-201ENST00000212355 XRCC6P12956 609 aaKnown RBP eCLIP15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 GIMAP7Q8NHV1 300 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 PUS7Q96PZ0 661 aaKnown RBP15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 STX17P56962 302 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 RRAGBQ5VZM2 374 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 CCDC186Q7Z3E2 898 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 ZSCAN22P10073 491 aaPredicted RBP15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 KARSQ15046 597 aaKnown RBP15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 PAXIP1Q6ZW49 1069 aaPredicted RBP15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 SYCP3Q8IZU3 236 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 HELBQ8NG08 1087 aaPredicted RBP15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 KAT14Q9H8E8 782 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 HYPKQ9NX55 129 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 STX8Q9UNK0 236 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 ABCC5O15440 1437 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 CTNNA2P26232 953 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 UBASH3AP57075 661 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 ZNF622Q969S3 477 aaKnown RBP eCLIP15.66■□□□□ 0.14e-6■■□□□ 13.5
TGFBR3-201ENST00000212355 EZRP15311 586 aaKnown RBP15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 HEATR3Q7Z4Q2 680 aa15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 LRRC59Q96AG4 307 aaKnown RBP15.66■□□□□ 0.1
TGFBR3-201ENST00000212355 TMEM266Q2M3C6 531 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 KCNH5Q8NCM2 988 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 ZKSCAN3Q9BRR0 538 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 ZNF652Q9Y2D9 606 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 CWC25Q9NXE8 425 aaPredicted RBP15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 RBM8AQ9Y5S9 174 aaKnown RBP15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 RLBP1P12271 317 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 IDI1Q13907 227 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 PHF8Q9UPP1 1060 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 SMIM23A6NLE4 172 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 DNAJC21Q5F1R6 531 aaKnown RBP15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 CABLES1Q8TDN4 633 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 TRIM47Q96LD4 638 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 DNAI1Q9UI46 699 aa15.65■□□□□ 0.1
TGFBR3-201ENST00000212355 EFCAB5A4FU69 1503 aa15.64■□□□□ 0.1
TGFBR3-201ENST00000212355 UBE2HP62256 183 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 MCM6Q14566 821 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 PLS1Q14651 629 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 TNIP1Q15025 636 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 LRSAM1Q6UWE0 723 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 MIGA1Q8NAN2 632 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 ANKRD24Q8TF21 1146 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 CUL5Q93034 780 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 SYKP43405 635 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 NMIQ13287 307 aaPredicted RBP15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 DPH6Q7L8W6 267 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 DACT1Q9NYF0 836 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 KAT6BQ8WYB5 2073 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 APOBRQ0VD83 1088 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms