RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CARD10Q9BWT7 1032 aa14.38□□□□□ -0.11
CHPF2-201ENST00000035307 SOS1Q07889 1333 aaPredicted RBP14.37□□□□□ -0.11
CHPF2-201ENST00000035307 HAND2P61296 217 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 RBM10P98175 930 aaKnown RBP14.37□□□□□ -0.11
CHPF2-201ENST00000035307 ERC1Q8IUD2 1116 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 GOLGA6L19H0YKK7 550 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 NFXL1Q6ZNB6 911 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 AK7Q96M32 723 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 ANKARQ7Z5J8 1434 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 LAMC1P11047 1609 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 ABCC4O15439 1325 aa14.37□□□□□ -0.11
CHPF2-201ENST00000035307 IFIT1P09914 478 aaKnown RBP14.37□□□□□ -0.11
CHPF2-201ENST00000035307 MAP2P11137 1827 aaKnown RBP14.37□□□□□ -0.11
CHPF2-201ENST00000035307 LRRC2Q9BYS8 371 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.36□□□□□ -0.11
CHPF2-201ENST00000035307 RFC4P35249 363 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 LARP1BQ659C4 914 aaKnown RBP14.36□□□□□ -0.11
CHPF2-201ENST00000035307 RASSF8Q8NHQ8 419 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 SNAP23O00161 211 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 TAF5LO75529 589 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 GCKRQ14397 625 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 CAMK4Q16566 473 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 ECHDC1Q9NTX5 307 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 PDRG1Q9NUG6 133 aa14.36□□□□□ -0.11
CHPF2-201ENST00000035307 BAG4O95429 457 aaKnown RBP14.35□□□□□ -0.11
CHPF2-201ENST00000035307 GUCY1B3Q02153 619 aa14.35□□□□□ -0.11
CHPF2-201ENST00000035307 TECPR2O15040 1411 aa14.35□□□□□ -0.11
CHPF2-201ENST00000035307 IRS4O14654 1257 aaPredicted RBP14.35□□□□□ -0.11
CHPF2-201ENST00000035307 NRDCO43847 1150 aa14.35□□□□□ -0.11
CHPF2-201ENST00000035307 BEND3Q5T5X7 828 aa14.35□□□□□ -0.11
CHPF2-201ENST00000035307 RALYLQ86SE5 291 aaKnown RBP14.35□□□□□ -0.11
CHPF2-201ENST00000035307 RTL1A6NKG5 1358 aa14.35□□□□□ -0.11
CHPF2-201ENST00000035307 GLRX3O76003 335 aaKnown RBP14.35□□□□□ -0.11
CHPF2-201ENST00000035307 NBPF5PQ86XG9 351 aaPredicted RBP14.35□□□□□ -0.11
CHPF2-201ENST00000035307 NECAB1Q8N987 351 aa14.35□□□□□ -0.11
CHPF2-201ENST00000035307 METTL22Q9BUU2 404 aaPredicted RBP14.35□□□□□ -0.11
CHPF2-201ENST00000035307 BLOC1S2Q6QNY1 142 aa14.34□□□□□ -0.11
CHPF2-201ENST00000035307 DBNDD2Q9BQY9 259 aa14.34□□□□□ -0.11
CHPF2-201ENST00000035307 CCNL1Q9UK58 526 aaPredicted RBP14.34□□□□□ -0.11
CHPF2-201ENST00000035307 USP31Q70CQ4 1352 aa14.34□□□□□ -0.11
CHPF2-201ENST00000035307 XRCC6P12956 609 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHPF2-201ENST00000035307 C3P01024 1663 aa14.34□□□□□ -0.11
CHPF2-201ENST00000035307 NEURL1BA8MQ27 555 aa14.34□□□□□ -0.11
CHPF2-201ENST00000035307 ESPNB1AK53 854 aa14.34□□□□□ -0.11
CHPF2-201ENST00000035307 TRDNQ13061 729 aa14.34□□□□□ -0.11
CHPF2-201ENST00000035307 TFIP11Q9UBB9 837 aaKnown RBP14.34□□□□□ -0.11
CHPF2-201ENST00000035307 IGHMBP2P38935 993 aaKnown RBP14.33□□□□□ -0.11
CHPF2-201ENST00000035307 PIBF1Q8WXW3 757 aa14.33□□□□□ -0.11
CHPF2-201ENST00000035307 RAI14Q9P0K7 980 aa14.33□□□□□ -0.11
CHPF2-201ENST00000035307 KIAA1210Q9ULL0 1709 aa14.33□□□□□ -0.12
CHPF2-201ENST00000035307 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.12
CHPF2-201ENST00000035307 PES1O00541 588 aaKnown RBP14.33□□□□□ -0.12
CHPF2-201ENST00000035307 LRP2BPQ9P2M1 347 aa14.33□□□□□ -0.12
CHPF2-201ENST00000035307 DLC1Q96QB1 1528 aa14.33□□□□□ -0.12
CHPF2-201ENST00000035307 RAB11FIP3O75154 756 aa14.33□□□□□ -0.12
CHPF2-201ENST00000035307 ANKIB1Q9P2G1 1089 aa14.33□□□□□ -0.12
CHPF2-201ENST00000035307 ALDH1L1O75891 902 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 TRIM37O94972 964 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 CCDC129Q6ZRS4 1044 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 UNC5CLQ8IV45 518 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 SDF4Q9BRK5 362 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 PUS3Q9BZE2 481 aaKnown RBP14.32□□□□□ -0.12
CHPF2-201ENST00000035307 QTRT2Q9H974 415 aaKnown RBP14.32□□□□□ -0.12
CHPF2-201ENST00000035307 CIZ1Q9ULV3 898 aaPredicted RBP14.32□□□□□ -0.12
CHPF2-201ENST00000035307 KIF3AQ9Y496 699 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 TMX3Q96JJ7 454 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 GSPT1P15170 499 aaKnown RBP14.32□□□□□ -0.12
CHPF2-201ENST00000035307 EPHA10Q5JZY3 1008 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 TSPY26PQ9H489 355 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 VSIG10Q8N0Z9 540 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 TLR7Q9NYK1 1049 aaKnown RBP14.32□□□□□ -0.12
CHPF2-201ENST00000035307 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
CHPF2-201ENST00000035307 HSPA1LP34931 641 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 MCM2P49736 904 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 LRRC24Q50LG9 513 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 CHST3Q7LGC8 479 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 PLBD2Q8NHP8 589 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 CWC22Q9HCG8 908 aaKnown RBP14.31□□□□□ -0.12
CHPF2-201ENST00000035307 TFCP2L1Q9NZI6 479 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 LOC102724428A0A0B4J2F2 783 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 MBD3O95983 291 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 SIK1P57059 783 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 SASS6Q6UVJ0 657 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 WDR33Q9C0J8 1336 aaKnown RBP14.31□□□□□ -0.12
CHPF2-201ENST00000035307 PSMA5P28066 241 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 HLFQ16534 295 aa14.31□□□□□ -0.12
CHPF2-201ENST00000035307 TEX13AQ9BXU3 409 aaPredicted RBP14.31□□□□□ -0.12
CHPF2-201ENST00000035307 SF3B2Q13435 895 aaKnown RBP14.3□□□□□ -0.12
CHPF2-201ENST00000035307 SLFNL1Q499Z3 407 aa14.3□□□□□ -0.12
CHPF2-201ENST00000035307 TRIM5Q9C035 493 aa14.3□□□□□ -0.12
CHPF2-201ENST00000035307 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
CHPF2-201ENST00000035307 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
CHPF2-201ENST00000035307 SETDB2Q96T68 719 aa14.29□□□□□ -0.12
CHPF2-201ENST00000035307 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
CHPF2-201ENST00000035307 POLR1AO95602 1720 aaPredicted RBP14.29□□□□□ -0.12
CHPF2-201ENST00000035307 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
CHPF2-201ENST00000035307 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms