RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 UTP14AQ9BVJ6 771 aaKnown RBP32.27■■■□□ 2.76
TSR3-201ENST00000007390 KIF3CO14782 793 aa32.26■■■□□ 2.75
TSR3-201ENST00000007390 ALDH1B1P30837 517 aa32.26■■■□□ 2.75
TSR3-201ENST00000007390 NLRP10Q86W26 655 aa32.26■■■□□ 2.75
TSR3-201ENST00000007390 CHMP4AQ9BY43 222 aa32.26■■■□□ 2.75
TSR3-201ENST00000007390 CACNA1SQ13698 1873 aa32.26■■■□□ 2.75
TSR3-201ENST00000007390 ELL2O00472 640 aaPredicted RBP32.25■■■□□ 2.75
TSR3-201ENST00000007390 ANKRD13DQ6ZTN6 518 aa32.25■■■□□ 2.75
TSR3-201ENST00000007390 SENP3-EIF4A1A0A087X0R7 540 aa32.24■■■□□ 2.75
TSR3-201ENST00000007390 HOXA10P31260 410 aaPredicted RBP32.24■■■□□ 2.75
TSR3-201ENST00000007390 SLC10A5Q5PT55 438 aa32.24■■■□□ 2.75
TSR3-201ENST00000007390 TAOK3Q9H2K8 898 aa32.24■■■□□ 2.75
TSR3-201ENST00000007390 CCDC93Q567U6 631 aa32.23■■■□□ 2.75
TSR3-201ENST00000007390 TSR2Q969E8 191 aaKnown RBP32.23■■■□□ 2.75
TSR3-201ENST00000007390 KDM2BQ8NHM5 1336 aa32.23■■■□□ 2.75
TSR3-201ENST00000007390 RPGRQ92834 1020 aaKnown RBP32.21■■■□□ 2.75
TSR3-201ENST00000007390 NMRK2Q9NPI5 230 aa32.2■■■□□ 2.75
TSR3-201ENST00000007390 TIAM2Q8IVF5 1701 aa32.2■■■□□ 2.74
TSR3-201ENST00000007390 CCDC30Q5VVM6 783 aa32.19■■■□□ 2.74
TSR3-201ENST00000007390 TSPYL6Q8N831 410 aa32.19■■■□□ 2.74
TSR3-201ENST00000007390 NLRP3Q96P20 1036 aa32.19■■■□□ 2.74
TSR3-201ENST00000007390 ISCA1Q9BUE6 129 aa32.19■■■□□ 2.74
TSR3-201ENST00000007390 C3orf67Q6ZVT6 689 aa32.18■■■□□ 2.74
TSR3-201ENST00000007390 WDR63Q8IWG1 891 aa32.18■■■□□ 2.74
TSR3-201ENST00000007390 FAM9BQ8IZU0 186 aa32.18■■■□□ 2.74
TSR3-201ENST00000007390 CRAMP1Q96RY5 1269 aa32.18■■■□□ 2.74
TSR3-201ENST00000007390 CCDC88AQ3V6T2 1871 aa32.17■■■□□ 2.74
TSR3-201ENST00000007390 TRMT112Q9UI30 125 aaKnown RBP32.17■■■□□ 2.74
TSR3-201ENST00000007390 SH3TC1Q8TE82 1336 aa32.17■■■□□ 2.74
TSR3-201ENST00000007390 GOLGA2Q08379 1002 aa32.16■■■□□ 2.74
TSR3-201ENST00000007390 RTKN2Q8IZC4 609 aa32.16■■■□□ 2.74
TSR3-201ENST00000007390 RBM17Q96I25 401 aaKnown RBP32.16■■■□□ 2.74
TSR3-201ENST00000007390 PHAXQ9H814 394 aaKnown RBP32.16■■■□□ 2.74
TSR3-201ENST00000007390 TRIM28Q13263 835 aaKnown RBP32.15■■■□□ 2.74
TSR3-201ENST00000007390 DICER1Q9UPY3 1922 aaKnown RBP32.15■■■□□ 2.74
TSR3-201ENST00000007390 SNED1Q8TER0 1413 aa32.15■■■□□ 2.74
TSR3-201ENST00000007390 GLTPD2A6NH11 291 aa32.14■■■□□ 2.74
TSR3-201ENST00000007390 FKBP4Q02790 459 aaKnown RBP eCLIP32.14■■■□□ 2.74
TSR3-201ENST00000007390 CC2D2BQ6DHV5 1058 aa32.14■■■□□ 2.74
TSR3-201ENST00000007390 OLFM4Q6UX06 510 aa32.14■■■□□ 2.74
TSR3-201ENST00000007390 FANCIQ9NVI1 1328 aa32.12■■■□□ 2.73
TSR3-201ENST00000007390 TWISTNBQ3B726 338 aaPredicted RBP32.12■■■□□ 2.73
TSR3-201ENST00000007390 RIC3Q7Z5B4 369 aa32.12■■■□□ 2.73
TSR3-201ENST00000007390 SALL2Q9Y467 1007 aaPredicted RBP32.12■■■□□ 2.73
TSR3-201ENST00000007390 ATP5J2-PTCD1G3V325 749 aa32.11■■■□□ 2.73
TSR3-201ENST00000007390 TOMM70O94826 608 aa32.11■■■□□ 2.73
TSR3-201ENST00000007390 HCLS1P14317 486 aaPredicted RBP32.11■■■□□ 2.73
TSR3-201ENST00000007390 SYNE4Q8N205 404 aa32.11■■■□□ 2.73
TSR3-201ENST00000007390 DDX58O95786 925 aaKnown RBP32.09■■■□□ 2.73
TSR3-201ENST00000007390 GRIPAP1Q4V328 841 aa32.09■■■□□ 2.73
TSR3-201ENST00000007390 PSMD1Q99460 953 aa32.09■■■□□ 2.73
TSR3-201ENST00000007390 STK31Q9BXU1 1019 aa32.09■■■□□ 2.73
TSR3-201ENST00000007390 PPEF1O14829 653 aaPredicted RBP32.08■■■□□ 2.73
TSR3-201ENST00000007390 LAMB2P55268 1798 aa32.07■■■□□ 2.72
TSR3-201ENST00000007390 RRAGCQ9HB90 399 aa32.07■■■□□ 2.72
TSR3-201ENST00000007390 ABCC4O15439 1325 aa32.06■■■□□ 2.72
TSR3-201ENST00000007390 DPY19L2Q6NUT2 758 aa32.06■■■□□ 2.72
TSR3-201ENST00000007390 ZNF277Q9NRM2 450 aaPredicted RBP32.06■■■□□ 2.72
TSR3-201ENST00000007390 FAM89AQ96GI7 184 aa32.05■■■□□ 2.72
TSR3-201ENST00000007390 DDX60Q8IY21 1712 aaKnown RBP32.04■■■□□ 2.72
TSR3-201ENST00000007390 C16orf71Q8IYS4 520 aaPredicted RBP32.04■■■□□ 2.72
TSR3-201ENST00000007390 RBM46Q8TBY0 533 aaKnown RBP32.04■■■□□ 2.72
TSR3-201ENST00000007390 MYD88Q99836 296 aa32.04■■■□□ 2.72
TSR3-201ENST00000007390 CCDC191Q8NCU4 936 aa32.03■■■□□ 2.72
TSR3-201ENST00000007390 ZNF428Q96B54 188 aa32.03■■■□□ 2.72
TSR3-201ENST00000007390 METTL22Q9BUU2 404 aaPredicted RBP32.03■■■□□ 2.72
TSR3-201ENST00000007390 ATP6V0A2Q9Y487 856 aa32.03■■■□□ 2.72
TSR3-201ENST00000007390 CEP350Q5VT06 3117 aa32.03■■■□□ 2.72
TSR3-201ENST00000007390 BBOX1O75936 387 aa32.02■■■□□ 2.72
TSR3-201ENST00000007390 VEGFAP15692 232 aaPredicted RBP32.02■■■□□ 2.72
TSR3-201ENST00000007390 IARSP41252 1262 aaKnown RBP32.02■■■□□ 2.72
TSR3-201ENST00000007390 KSR2Q6VAB6 950 aa32.02■■■□□ 2.72
TSR3-201ENST00000007390 DDX46Q7L014 1031 aaKnown RBP32.02■■■□□ 2.72
TSR3-201ENST00000007390 SPINK5Q9NQ38 1064 aaPredicted RBP32.02■■■□□ 2.72
TSR3-201ENST00000007390 WDR90Q96KV7 1748 aa32.02■■■□□ 2.72
TSR3-201ENST00000007390 SF3B3Q15393 1217 aaKnown RBP32.01■■■□□ 2.71
TSR3-201ENST00000007390 ZBTB38Q8NAP3 1195 aaPredicted RBP32.01■■■□□ 2.71
TSR3-201ENST00000007390 MYH16Q9H6N6 1097 aa32.01■■■□□ 2.71
TSR3-201ENST00000007390 TCERG1O14776 1098 aaKnown RBP32■■■□□ 2.71
TSR3-201ENST00000007390 SLC4A2P04920 1241 aa32■■■□□ 2.71
TSR3-201ENST00000007390 HSPA6P17066 643 aa32■■■□□ 2.71
TSR3-201ENST00000007390 MAP3K2Q9Y2U5 619 aa32■■■□□ 2.71
TSR3-201ENST00000007390 ZNF521Q96K83 1311 aa32■■■□□ 2.71
TSR3-201ENST00000007390 PI4KAP2A4QPH2 592 aa31.99■■■□□ 2.71
TSR3-201ENST00000007390 IRS4O14654 1257 aaPredicted RBP31.99■■■□□ 2.71
TSR3-201ENST00000007390 VAMP4O75379 141 aa31.99■■■□□ 2.71
TSR3-201ENST00000007390 EXOSC9Q06265 439 aaKnown RBP31.99■■■□□ 2.71
TSR3-201ENST00000007390 GRAPQ13588 217 aa31.99■■■□□ 2.71
TSR3-201ENST00000007390 SLC51AQ86UW1 340 aa31.99■■■□□ 2.71
TSR3-201ENST00000007390 PI4KAP1Q8N8J0 262 aa31.99■■■□□ 2.71
TSR3-201ENST00000007390 GRAPLQ8TC17 118 aaPredicted RBP31.99■■■□□ 2.71
TSR3-201ENST00000007390 TMX4Q9H1E5 349 aaPredicted RBP31.99■■■□□ 2.71
TSR3-201ENST00000007390 HSP90B1P14625 803 aaKnown RBP31.98■■■□□ 2.71
TSR3-201ENST00000007390 CWC25Q9NXE8 425 aaPredicted RBP31.98■■■□□ 2.71
TSR3-201ENST00000007390 POTECB2RU33 542 aa31.97■■■□□ 2.71
TSR3-201ENST00000007390 PCCAP05165 728 aaPredicted RBP31.97■■■□□ 2.71
TSR3-201ENST00000007390 G2E3Q7L622 706 aa31.97■■■□□ 2.71
TSR3-201ENST00000007390 FSTL1Q12841 308 aa31.96■■■□□ 2.71
TSR3-201ENST00000007390 RTL5Q5HYW3 569 aaPredicted RBP31.96■■■□□ 2.71
TSR3-201ENST00000007390 TMC4Q7Z404 712 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms