RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 TPCN1Q9ULQ1 816 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 PTGS1P23219 599 aa12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 STK3Q13188 491 aa12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 CREB3L3Q68CJ9 461 aa12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 PXDNLA1KZ92 1463 aa12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
CX3CL1-201ENST00000006053 ZBTB22O15209 634 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 GTF2F1P35269 517 aaKnown RBP eCLIP12.49□□□□□ -0.411e-7■■■□□ 15.6
CX3CL1-201ENST00000006053 TYRO3Q06418 890 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 FAM200AQ8TCP9 573 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 CCDC8Q9H0W5 538 aaPredicted RBP12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 NALCNQ8IZF0 1738 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 ZSCAN20P17040 1043 aaPredicted RBP12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 TEFQ10587 303 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 TNMDQ9H2S6 317 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 BABAM1Q9NWV8 329 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 EVI5LQ96CN4 794 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 TM6SF1Q9BZW5 370 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
CX3CL1-201ENST00000006053 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
CX3CL1-201ENST00000006053 TPM3P06753 285 aa12.48□□□□□ -0.41
CX3CL1-201ENST00000006053 CWF19L2Q2TBE0 894 aaKnown RBP12.48□□□□□ -0.41
CX3CL1-201ENST00000006053 MAP3K2Q9Y2U5 619 aa12.48□□□□□ -0.41
CX3CL1-201ENST00000006053 PTPRUQ92729 1446 aa12.48□□□□□ -0.41
CX3CL1-201ENST00000006053 CCDC186Q7Z3E2 898 aa12.48□□□□□ -0.41
CX3CL1-201ENST00000006053 BOLA2Q9H3K6 86 aa12.48□□□□□ -0.41
CX3CL1-201ENST00000006053 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
CX3CL1-201ENST00000006053 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 ANO6Q4KMQ2 910 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 MPRIPQ6WCQ1 1025 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 SIL1Q9H173 461 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 FMN2Q9NZ56 1722 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 SLC27A2O14975 620 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 ATP2B3Q16720 1220 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 FSD1Q9BTV5 496 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 PSMA5P28066 241 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 LRMPQ12912 555 aa12.47□□□□□ -0.41
CX3CL1-201ENST00000006053 G3BP1Q13283 466 aaKnown RBP eCLIP12.46□□□□□ -0.41
CX3CL1-201ENST00000006053 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
CX3CL1-201ENST00000006053 BICD2Q8TD16 824 aa12.46□□□□□ -0.41
CX3CL1-201ENST00000006053 CBX8Q9HC52 389 aa12.46□□□□□ -0.41
CX3CL1-201ENST00000006053 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.41
CX3CL1-201ENST00000006053 TAF6LQ9Y6J9 622 aa12.46□□□□□ -0.41
CX3CL1-201ENST00000006053 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.41
CX3CL1-201ENST00000006053 ADCY9O60503 1353 aa12.46□□□□□ -0.41
CX3CL1-201ENST00000006053 PDCP20941 246 aa12.46□□□□□ -0.42
CX3CL1-201ENST00000006053 PROSER3Q2NL68 480 aa12.46□□□□□ -0.42
CX3CL1-201ENST00000006053 ERC1Q8IUD2 1116 aa12.46□□□□□ -0.42
CX3CL1-201ENST00000006053 C16orf45Q96MC5 204 aaPredicted RBP12.46□□□□□ -0.42
CX3CL1-201ENST00000006053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.46□□□□□ -0.42
CX3CL1-201ENST00000006053 A0A0D9SFI3 127 aa12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 AIMP1Q12904 312 aaKnown RBP12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 MAP4K1Q92918 833 aa12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 EAF2Q96CJ1 260 aaPredicted RBP12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 CGNQ9P2M7 1197 aaKnown RBP12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 NBPF6Q5VWK0 638 aa12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 ZNF530Q6P9A1 599 aaPredicted RBP12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 NBPF4Q96M43 638 aa12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 TLR7Q9NYK1 1049 aaKnown RBP12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 PLEKHG1Q9ULL1 1385 aa12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 HSPA2P54652 639 aa12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
CX3CL1-201ENST00000006053 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 KCNB2Q92953 911 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 SCAND2PQ9GZW5 306 aaPredicted RBP12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 DBF4Q9UBU7 674 aaPredicted RBP12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 IGSF3O75054 1194 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 U2AF2P26368 475 aaKnown RBP eCLIP12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 KLHDC4Q8TBB5 520 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 DNAJC25Q9H1X3 360 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 LRRC37A3O60309 1634 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 SASH1O94885 1247 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 KIF20AO95235 890 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 FOSBP53539 338 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 CEBPZQ03701 1054 aaKnown RBP12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 MTX1Q13505 466 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 LEO1Q8WVC0 666 aaPredicted RBP12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 SUCLG2Q96I99 432 aa12.44□□□□□ -0.42
CX3CL1-201ENST00000006053 HIP1O00291 1037 aa12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 NR1I2O75469 434 aa12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 211 ms