RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 SLC27A3Q5K4L6 730 aa23.84■■□□□ 1.41
IFRD1-201ENST00000005558 CHD1LQ86WJ1 897 aa23.84■■□□□ 1.41
IFRD1-201ENST00000005558 GNPATO15228 680 aa23.84■■□□□ 1.41
IFRD1-201ENST00000005558 SRGAP3O43295 1099 aa23.84■■□□□ 1.41
IFRD1-201ENST00000005558 HMMRO75330 724 aa23.84■■□□□ 1.41
IFRD1-201ENST00000005558 RGS3P49796 1198 aa23.84■■□□□ 1.41
IFRD1-201ENST00000005558 RTL5Q5HYW3 569 aaPredicted RBP23.83■■□□□ 1.41
IFRD1-201ENST00000005558 ANKRD45Q5TZF3 282 aa23.83■■□□□ 1.41
IFRD1-201ENST00000005558 LNPKQ9C0E8 428 aa23.83■■□□□ 1.41
IFRD1-201ENST00000005558 EXOC6BQ9Y2D4 811 aa23.83■■□□□ 1.41
IFRD1-201ENST00000005558 HSP90AB3PQ58FF7 597 aa23.82■■□□□ 1.4
IFRD1-201ENST00000005558 APBA3O96018 575 aa23.82■■□□□ 1.4
IFRD1-201ENST00000005558 PCCAP05165 728 aaPredicted RBP23.82■■□□□ 1.4
IFRD1-201ENST00000005558 RFX5P48382 616 aaPredicted RBP23.81■■□□□ 1.4
IFRD1-201ENST00000005558 ARHGEF1Q92888 912 aaKnown RBP23.81■■□□□ 1.4
IFRD1-201ENST00000005558 FAM89AQ96GI7 184 aa23.81■■□□□ 1.4
IFRD1-201ENST00000005558 SRP68Q9UHB9 627 aaKnown RBP23.81■■□□□ 1.4
IFRD1-201ENST00000005558 RGPD3A6NKT7 1758 aaPredicted RBP23.81■■□□□ 1.4
IFRD1-201ENST00000005558 RGPD4Q7Z3J3 1758 aa23.81■■□□□ 1.4
IFRD1-201ENST00000005558 SMARCA5O60264 1052 aaPredicted RBP23.8■■□□□ 1.4
IFRD1-201ENST00000005558 ZBTB38Q8NAP3 1195 aaPredicted RBP23.8■■□□□ 1.4
IFRD1-201ENST00000005558 NARFQ9UHQ1 456 aa23.8■■□□□ 1.4
IFRD1-201ENST00000005558 NOP58Q9Y2X3 529 aaKnown RBP23.8■■□□□ 1.4
IFRD1-201ENST00000005558 SUSD4Q5VX71 490 aa23.8■■□□□ 1.4
IFRD1-201ENST00000005558 HDAC5Q9UQL6 1122 aa23.8■■□□□ 1.4
IFRD1-201ENST00000005558 RTCBQ9Y3I0 505 aaKnown RBP23.8■■□□□ 1.4
IFRD1-201ENST00000005558 C16orf71Q8IYS4 520 aaPredicted RBP23.79■■□□□ 1.4
IFRD1-201ENST00000005558 PA2G4Q9UQ80 394 aaKnown RBP23.79■■□□□ 1.4
IFRD1-201ENST00000005558 CLEC4GQ6UXB4 293 aa23.78■■□□□ 1.4
IFRD1-201ENST00000005558 NPM2Q86SE8 214 aaKnown RBP23.78■■□□□ 1.4
IFRD1-201ENST00000005558 RGL2O15211 777 aa23.77■■□□□ 1.4
IFRD1-201ENST00000005558 USPL1Q5W0Q7 1092 aa23.77■■□□□ 1.4
IFRD1-201ENST00000005558 PLA2G12BQ9BX93 195 aa23.77■■□□□ 1.4
IFRD1-201ENST00000005558 CDHR2Q9BYE9 1310 aa23.77■■□□□ 1.4
IFRD1-201ENST00000005558 TUBGCP6Q96RT7 1819 aa23.77■■□□□ 1.4
IFRD1-201ENST00000005558 OTUD7AQ8TE49 926 aaPredicted RBP23.77■■□□□ 1.4
IFRD1-201ENST00000005558 DDX60Q8IY21 1712 aaKnown RBP23.76■■□□□ 1.39
IFRD1-201ENST00000005558 LMBR1LQ6UX01 489 aa23.76■■□□□ 1.39
IFRD1-201ENST00000005558 KLHDC4Q8TBB5 520 aa23.76■■□□□ 1.39
IFRD1-201ENST00000005558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.76■■□□□ 1.39
IFRD1-201ENST00000005558 COL24A1Q17RW2 1714 aa23.76■■□□□ 1.39
IFRD1-201ENST00000005558 APBB1O00213 710 aa23.75■■□□□ 1.39
IFRD1-201ENST00000005558 SURF6O75683 361 aaKnown RBP23.75■■□□□ 1.39
IFRD1-201ENST00000005558 AK7Q96M32 723 aa23.75■■□□□ 1.39
IFRD1-201ENST00000005558 MYH3P11055 1940 aa23.75■■□□□ 1.39
IFRD1-201ENST00000005558 ZNF827Q17R98 1081 aa23.75■■□□□ 1.39
IFRD1-201ENST00000005558 TBC1D9BQ66K14 1250 aa23.75■■□□□ 1.39
IFRD1-201ENST00000005558 AKT1S1Q96B36 256 aa23.75■■□□□ 1.39
IFRD1-201ENST00000005558 USP42Q9H9J4 1324 aaKnown RBP23.74■■□□□ 1.39
IFRD1-201ENST00000005558 NTSR2O95665 410 aa23.74■■□□□ 1.39
IFRD1-201ENST00000005558 CSF1RP07333 972 aa23.74■■□□□ 1.39
IFRD1-201ENST00000005558 PTPN12Q05209 780 aaKnown RBP23.74■■□□□ 1.39
IFRD1-201ENST00000005558 NIP7Q9Y221 180 aaKnown RBP eCLIP23.74■■□□□ 1.39
IFRD1-201ENST00000005558 PHF14O94880 888 aa23.73■■□□□ 1.39
IFRD1-201ENST00000005558 TRAPPC3LQ5T215 181 aa23.73■■□□□ 1.39
IFRD1-201ENST00000005558 TSHZ2Q9NRE2 1034 aa23.73■■□□□ 1.39
IFRD1-201ENST00000005558 TRMT112Q9UI30 125 aaKnown RBP23.73■■□□□ 1.39
IFRD1-201ENST00000005558 SALL3Q9BXA9 1300 aa23.73■■□□□ 1.39
IFRD1-201ENST00000005558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.73■■□□□ 1.39
IFRD1-201ENST00000005558 COPRSQ9NQ92 184 aa23.73■■□□□ 1.39
IFRD1-201ENST00000005558 PLEKHM2Q8IWE5 1019 aa23.72■■□□□ 1.39
IFRD1-201ENST00000005558 CAMKK2Q96RR4 588 aa23.72■■□□□ 1.39
IFRD1-201ENST00000005558 LAMB2P55268 1798 aa23.72■■□□□ 1.39
IFRD1-201ENST00000005558 SASH1O94885 1247 aa23.71■■□□□ 1.39
IFRD1-201ENST00000005558 PARP10Q53GL7 1025 aa23.71■■□□□ 1.39
IFRD1-201ENST00000005558 ZNF652Q9Y2D9 606 aa23.71■■□□□ 1.39
IFRD1-201ENST00000005558 IRS4O14654 1257 aaPredicted RBP23.7■■□□□ 1.39
IFRD1-201ENST00000005558 RAB11FIP3O75154 756 aa23.7■■□□□ 1.39
IFRD1-201ENST00000005558 ADRA2BP18089 450 aa23.7■■□□□ 1.39
IFRD1-201ENST00000005558 RHPN1Q8TCX5 695 aa23.7■■□□□ 1.39
IFRD1-201ENST00000005558 LRRCC1Q9C099 1032 aa23.7■■□□□ 1.39
IFRD1-201ENST00000005558 CASZ1Q86V15 1759 aa23.7■■□□□ 1.38
IFRD1-201ENST00000005558 UTP14AQ9BVJ6 771 aaKnown RBP23.7■■□□□ 1.38
IFRD1-201ENST00000005558 SSFA2P28290 1259 aa23.69■■□□□ 1.38
IFRD1-201ENST00000005558 TTLL11Q8NHH1 800 aa23.69■■□□□ 1.38
IFRD1-201ENST00000005558 FAM177BA6PVY3 158 aa23.68■■□□□ 1.38
IFRD1-201ENST00000005558 ZPR1O75312 459 aa23.68■■□□□ 1.38
IFRD1-201ENST00000005558 RFC4P35249 363 aa23.68■■□□□ 1.38
IFRD1-201ENST00000005558 EZH2Q15910 746 aaKnown RBP23.68■■□□□ 1.38
IFRD1-201ENST00000005558 NUTM1Q86Y26 1132 aa23.68■■□□□ 1.38
IFRD1-201ENST00000005558 IL1RAPL2Q9NP60 686 aa23.68■■□□□ 1.38
IFRD1-201ENST00000005558 SH3TC1Q8TE82 1336 aa23.67■■□□□ 1.38
IFRD1-201ENST00000005558 EN1Q05925 392 aaPredicted RBP23.67■■□□□ 1.38
IFRD1-201ENST00000005558 C8orf34Q49A92 452 aa23.67■■□□□ 1.38
IFRD1-201ENST00000005558 GYS1P13807 737 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 HCLS1P14317 486 aaPredicted RBP23.66■■□□□ 1.38
IFRD1-201ENST00000005558 FAM161AQ3B820 660 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 BICDL1Q6ZP65 573 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 ZNF594Q96JF6 807 aaPredicted RBP23.66■■□□□ 1.38
IFRD1-201ENST00000005558 SIL1Q9H173 461 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 COL4A1P02462 1669 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 PDE8AO60658 829 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 CTSWP56202 376 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 ATG9AQ7Z3C6 839 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 KIF1BPQ96EK5 621 aa23.66■■□□□ 1.38
IFRD1-201ENST00000005558 ERFEQ4G0M1 354 aa23.65■■□□□ 1.38
IFRD1-201ENST00000005558 CCDC85AQ96PX6 553 aaPredicted RBP23.65■■□□□ 1.38
IFRD1-201ENST00000005558 GREM2Q9H772 168 aa23.65■■□□□ 1.38
IFRD1-201ENST00000005558 NFIXQ14938 502 aa23.64■■□□□ 1.38
IFRD1-201ENST00000005558 C3orf67Q6ZVT6 689 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms