RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Smco2Q9DA21 347 aa19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Nphp3Q7TNH6 1325 aa19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Mcmdc2E9Q956 681 aa19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Fam177a1Q8BR63 207 aa19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Rai14Q9EP71 979 aaKnown RBP19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Pla2r1Q62028 1487 aa19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Rnf41Q8BH75 317 aa19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Ppfibp1Q8C8U0 969 aaKnown RBP19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Slc5a1Q8C3K6 665 aa19.9■□□□□ 0.78
Ebf3-204ENSMUST00000169486 Clcn1Q64347 994 aa19.89■□□□□ 0.78
Ebf3-204ENSMUST00000169486 NmiO35309 314 aa19.89■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Rapgef6Q5NCJ1 1609 aa19.89■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Gm156Q58A37 223 aa19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Naa15Q80UM3 865 aaKnown RBP19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Tti2Q8BGV4 512 aa19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 PxdnQ3UQ28 1475 aa19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Gm45015A0A140LII9 184 aa19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Cavin2Q63918 418 aaKnown RBP19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Zswim4Q8C7B8 1101 aa19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Pa2g4P50580 394 aaKnown RBP19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ncbp1Q3UYV9 790 aaKnown RBP19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Skor1Q8BX46 964 aa19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 BC005561E9Q5E2 1589 aa19.88■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Kif2aP28740 705 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Hdhd2Q3UGR5 259 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Nap1l5Q9JJF0 156 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Hip1rQ9JKY5 1068 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ctdp1Q7TSG2 960 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Trap1aP19473 224 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Slc7a3P70423 618 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Mindy4Q3UQI9 744 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ppp1r10Q80W00 888 aaKnown RBP19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Krt25Q8VCW2 446 aa19.87■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Cers3Q1A3B0 383 aa19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Nfxl1E9Q8I7 918 aaKnown RBP19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Tbc1d2bQ3U0J8 965 aa19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Zfp397Q7TNK4 527 aa19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 DymQ8CHY3 669 aa19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Mapkbp1Q6NS57 1503 aa19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 ClasrpQ8CFC7 668 aa19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Cyp27a1Q9DBG1 533 aa19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Nol11Q8BJW5 723 aaKnown RBP19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Mug2P28666 1451 aa19.86■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Sptlc2P97363 560 aaKnown RBP19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 U2af2P26369 475 aaKnown RBP19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Frat1P70339 274 aa19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ddx10Q80Y44 875 aaKnown RBP19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 WizO88286 1684 aaKnown RBP19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ift122Q6NWV3 1182 aa19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Fam135bQ9DAI6 1403 aa19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ccdc162pQ0VG85 912 aa19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Lmbr1lQ9D1E5 489 aa19.85■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ift88Q61371 824 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Vps37dQ810I0 261 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Kmt5bQ3U8K7 883 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Gys2Q8VCB3 704 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Lman1Q9D0F3 517 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Pet2A2AHY8 747 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Traf3ip1Q149C2 625 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 RragbQ6NTA4 374 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Stx8O88983 236 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Kdm4cQ8VCD7 1054 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Uchl5Q9WUP7 329 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Samd9lQ69Z37 1561 aa19.84■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Shroom2A2ALU4 1481 aa19.83■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Fam170aQ66LM6 333 aa19.83■□□□□ 0.77
Ebf3-204ENSMUST00000169486 GptQ8QZR5 496 aa19.83■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Akap2O54931 893 aa19.83■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ifit2Q64112 472 aa19.83■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Cnpy2Q9QXT0 182 aa19.83■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Ak2Q9WTP6 239 aa19.83■□□□□ 0.77
Ebf3-204ENSMUST00000169486 Wdr7Q920I9 1489 aa19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Ankrd50F7BE84 1390 aa19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Gm3409A0A0G2JE67 319 aa19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Ankle2Q6P1H6 964 aa19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Smc1aQ9CU62 1233 aaKnown RBP19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Rufy3Q9D394 469 aa19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Prim1P20664 417 aa19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Mdm2P23804 489 aa19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Mrps25Q9D125 171 aaKnown RBP19.83■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Tmem132eQ6IEE6 982 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Irx4Q9QY61 515 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 AmfrQ9R049 643 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Plcd3Q8K2J0 785 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Tubb4aQ9D6F9 444 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Ptgs1P22437 602 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 GnpatP98192 678 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Sun3Q5SS91 320 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Cnot6lQ8VEG6 555 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Iffo1Q8BXL9 562 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Cwc25Q9DBF7 416 aa19.82■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Mctp2Q5RJH2 878 aa19.81■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Grm8P47743 908 aa19.81■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Aldh1l2Q8K009 923 aa19.81■□□□□ 0.76
Ebf3-204ENSMUST00000169486 IqcgQ80W32 419 aa19.81■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Cyp4f39Q8BGU0 532 aa19.81■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Cetn2Q9R1K9 172 aa19.81■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Tsr2Q8C8T8 191 aa19.81■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Q9D5Q8 446 aa19.81■□□□□ 0.76
Ebf3-204ENSMUST00000169486 Ctnnbl1Q9CWL8 563 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms