RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Zbtb40Q6PCS8 1258 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ccdc57Q6PHN1 1016 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Plcd1Q8R3B1 756 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Cep89Q9CZX2 791 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Q32P12 615 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Etf1Q8BWY3 437 aaKnown RBP8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Sh2b1Q91ZM2 756 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Abca8bQ8K440 1620 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Prdm16A2A935 1275 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Tbc1d2B1AVH7 922 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Stx1aO35526 288 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Dhx40Q6PE54 779 aaKnown RBP8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 MecomP14404 1042 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Cwc27Q3TKY6 469 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Evc2Q8K1G2 1220 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Golph3lQ8R088 285 aaKnown RBP8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Abcb6Q9DC29 842 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Fgd6Q69ZL1 1399 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Jakmip2D3YXK0 820 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Rnaseh1O70338 285 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Gnai2P08752 355 aaKnown RBP8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Pde11aP0C1Q2 933 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Evi5P97366 809 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ubxn4Q8VCH8 506 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Hnrnpul1Q8VDM6 859 aaKnown RBP8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ccdc83Q9D4V3 305 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Magi2Q9WVQ1 1275 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Q8VDP2 222 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Xpo4Q9ESJ0 1151 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Dpf1Q9QX66 387 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Cdk5rap2Q8K389 1822 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Exoc3l2D3YUP5 789 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ncoa7Q6DFV7 943 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Epc1Q8C9X6 813 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Arl8aQ8VEH3 186 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 NagaQ9QWR8 415 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Cbx8Q9QXV1 362 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Usp54Q8BL06 1588 aaKnown RBP8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Casz1Q9CWL2 1761 aa8.88□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ttc21bQ0HA38 1315 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Nphp3Q7TNH6 1325 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Kifc2O08672 792 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Mmp8O70138 465 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ctnna3Q65CL1 895 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Me3Q8BMF3 604 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Kif1bQ60575 1816 aaKnown RBP8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Clec11aO88200 328 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ints4Q8CIM8 964 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Atp8b3Q6UQ17 1335 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Gm32742A0A1B0GT42 1604 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ccne1Q61457 408 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Q8BZJ8 459 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Kri1Q8VDQ9 704 aaKnown RBP8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Bloc1s2Q9CWG9 143 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Saal1Q9D2C2 474 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Eif2ak3Q9Z2B5 1114 aa8.87□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Tbc1d4Q8BYJ6 1307 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ehbp1l1Q99MS7 1716 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ccdc121E9Q6D3 323 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Slc7a3P70423 618 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Cfap100Q80VN0 613 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 4930550L24RikQ99PA7 320 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Add2Q9QYB8 725 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Cnbd1B1AWM0 430 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Eef2kO08796 724 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Chl1P70232 1209 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Usp28Q5I043 1051 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Hspa4Q61316 841 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Atp1a2Q6PIE5 1020 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Top1mtQ8R4U6 593 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Dusp10Q9ESS0 483 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Efcab6Q6P1E8 1516 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 TrhQ62361 256 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ppp6r1Q7TSI3 856 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Q8BT18 775 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Def6Q8C2K1 630 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Srgap1Q91Z69 1062 aa8.86□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Zcchc11B2RX14 1644 aaKnown RBP8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Hecw1Q8K4P8 1604 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Dnai2A2AC93 623 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 XpcP51612 930 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Kcnd1Q03719 651 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 EspnlQ3UYR4 1005 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Smc1bQ920F6 1248 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Myo5cE9Q1F5 1742 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Sos1Q62245 1319 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Nos1Q9Z0J4 1429 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 ShprhQ7TPQ3 1674 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Rims1Q99NE5 1463 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Npdc1Q64322 332 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 SufuQ9Z0P7 484 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Sh3bp5Q9Z131 463 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ino80Q6ZPV2 1559 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 A0A1L1SQF0 893 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Bin1O08539 588 aaKnown RBP8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Prim1P20664 417 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Jph4Q80WT0 628 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Noc3lQ8VI84 807 aaKnown RBP8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Coro7Q9D2V7 922 aa8.85□□□□□ -0.99
Bdnf-209ENSMUST00000111050 MicalclQ9D5U9 680 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms