RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Smarcc1P97496 1104 aa20.95■□□□□ 0.94
Vps53-203ENSMUST00000108419 Edc3Q8K2D3 508 aaKnown RBP20.95■□□□□ 0.94
Vps53-203ENSMUST00000108419 Trim44Q9QXA7 346 aa20.95■□□□□ 0.94
Vps53-203ENSMUST00000108419 Arhgap33Q80YF9 1305 aa20.95■□□□□ 0.94
Vps53-203ENSMUST00000108419 Gm13023A2A8N2 498 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 SlkO54988 1233 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Ddrgk1Q80WW9 315 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Ttc19Q8CC21 365 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Abcc4E9Q236 1325 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Nek4Q9Z1J2 792 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Trip6Q9Z1Y4 480 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Mrc1Q61830 1456 aa20.94■□□□□ 0.94
Vps53-203ENSMUST00000108419 Cyp19a1P28649 503 aa20.93■□□□□ 0.94
Vps53-203ENSMUST00000108419 Esco1Q69Z69 843 aa20.93■□□□□ 0.94
Vps53-203ENSMUST00000108419 Ric1Q69ZJ7 1422 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 Sugp2Q8CH09 1067 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 GptQ8QZR5 496 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 Tbc1d9Q3UYK3 1264 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 Ptpdc1Q6NZK8 747 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 Slf2Q6P9P0 1278 aa20.92■□□□□ 0.94
Vps53-203ENSMUST00000108419 GalcP54818 684 aa20.91■□□□□ 0.94
Vps53-203ENSMUST00000108419 Cct4P80315 539 aaKnown RBP20.91■□□□□ 0.94
Vps53-203ENSMUST00000108419 Clca2Q8BG22 942 aa20.91■□□□□ 0.94
Vps53-203ENSMUST00000108419 Dhx38Q80X98 1228 aa20.9■□□□□ 0.94
Vps53-203ENSMUST00000108419 CenppQ9CZ92 286 aa20.9■□□□□ 0.94
Vps53-203ENSMUST00000108419 Tpx2A2APB8 745 aaKnown RBP20.89■□□□□ 0.94
Vps53-203ENSMUST00000108419 CalcaP70160 136 aa20.89■□□□□ 0.94
Vps53-203ENSMUST00000108419 Tfip11Q9ERA6 838 aaKnown RBP20.89■□□□□ 0.94
Vps53-203ENSMUST00000108419 Arap2Q8BZ05 1703 aa20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 Fkbp1aP26883 108 aaKnown RBP20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 Tpm2P58774 284 aa20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 BcanQ61361 883 aa20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 LratQ9JI60 231 aa20.89■□□□□ 0.93
Vps53-203ENSMUST00000108419 AppP12023 770 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Tmem87bQ8BKU8 555 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Q8C5K5 320 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Hmox1P14901 289 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 NexnQ7TPW1 607 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Smc4Q8CG47 1286 aa20.88■□□□□ 0.93
Vps53-203ENSMUST00000108419 Fbxo41Q6NS60 873 aa20.87■□□□□ 0.93
Vps53-203ENSMUST00000108419 Tex2Q6ZPJ0 1128 aaKnown RBP20.87■□□□□ 0.93
Vps53-203ENSMUST00000108419 Ppp6r1Q7TSI3 856 aa20.87■□□□□ 0.93
Vps53-203ENSMUST00000108419 Zkscan2G3X952 960 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 DekQ7TNV0 380 aaKnown RBP20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Tmx3Q8BXZ1 456 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 4930504O13RikQ8C5Z9 145 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Ly75Q60767 1723 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Dhx16G3X8X0 1044 aaKnown RBP20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Kiaa0319Q5SZV5 1081 aa20.86■□□□□ 0.93
Vps53-203ENSMUST00000108419 Dctn1O08788 1281 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Cops6O88545 324 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Prl3d3A0A0M6L0J6 224 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Prr29B1ARI9 187 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 C4bP01029 1738 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Susd4Q8BH32 490 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Prune1Q8BIW1 454 aa20.85■□□□□ 0.93
Vps53-203ENSMUST00000108419 Prl3d2F6R3P9 224 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Pdia3P27773 505 aaKnown RBP20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Snai1Q02085 264 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Ifit1bl2Q3U687 466 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Zbtb45Q52KG4 520 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Dis3l2Q8CI75 870 aaKnown RBP20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 RestQ8VIG1 1082 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Q9D2X8 372 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 CoblQ5NBX1 1337 aaKnown RBP20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Cyp2c23E9Q5K4 494 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 1700010I14RikQ7TPG0 532 aa20.84■□□□□ 0.93
Vps53-203ENSMUST00000108419 Ankrd31A0A140LI88 1765 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Sult6b1P0CC03 303 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Lrrc43Q3V0L5 667 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Bag4Q8CI61 457 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Trim34aQ99PP6 485 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Dmrtc1Q9D9R7 182 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Foxo4Q9WVH3 505 aa20.83■□□□□ 0.93
Vps53-203ENSMUST00000108419 Myh1Q5SX40 1942 aa20.83■□□□□ 0.92
Vps53-203ENSMUST00000108419 Fam228bQ497Q6 232 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 SowahdQ8BY98 327 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Chmp3Q9CQ10 224 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Lama4P97927 1816 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Casq1O09165 405 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Neurod6P48986 337 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Atp1b3P97370 278 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Atg9aQ68FE2 551 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Bloc1s4Q8VED2 215 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Ppp6r3Q922D4 844 aa20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 NgdnQ9DB96 315 aaKnown RBP20.82■□□□□ 0.92
Vps53-203ENSMUST00000108419 Plcb3P51432 1234 aaKnown RBP20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Cyp7a1Q64505 503 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Taok2Q6ZQ29 1240 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Slc26a8Q8R0C3 999 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 EngaseQ8BX80 734 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Greb1lB9EJV3 1913 aa20.81■□□□□ 0.92
Vps53-203ENSMUST00000108419 Anapc15-psA0A140T8L6 141 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Ankrd13dQ6PD24 605 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 GorabQ8BRM2 368 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Taf5lQ91WQ5 589 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Zbtb38Q3LR78 1197 aa20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Nol10Q5RJG1 687 aaKnown RBP20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Sf3a1Q8K4Z5 791 aaKnown RBP20.8■□□□□ 0.92
Vps53-203ENSMUST00000108419 Dpf1Q9QX66 387 aa20.8■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms