RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Skint5A7XUY5 1461 aa21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 Luzp1Q8R4U7 1068 aaKnown RBP21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 Bloc1s2Q9CWG9 143 aa21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 Knop1Q9Z2Q2 478 aaKnown RBP21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 Peg3Q3URU2 1571 aa21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 Mcmdc2E9Q956 681 aa21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 Ercc3P49135 783 aa21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 RtcbQ99LF4 505 aaKnown RBP21.28■■□□□ 1
Scaf11-201ENSMUST00000047835 AU019823E9PUQ3 292 aa21.27■■□□□ 1
Scaf11-201ENSMUST00000047835 Ufl1Q8CCJ3 793 aaKnown RBP21.27■■□□□ 1
Scaf11-201ENSMUST00000047835 Ttc12Q8BW49 704 aa21.27■■□□□ 1
Scaf11-201ENSMUST00000047835 Cyp2ab1S4R196 498 aa21.27■■□□□ 1
Scaf11-201ENSMUST00000047835 Ano8Q6PB70 1060 aa21.27■■□□□ 1
Scaf11-201ENSMUST00000047835 Tut1Q8R3F9 869 aa21.27■■□□□ 1
Scaf11-201ENSMUST00000047835 WtapQ9ER69 396 aa21.27■■□□□ 1
Scaf11-201ENSMUST00000047835 F2rP30558 430 aa21.27■□□□□ 0.99
Scaf11-201ENSMUST00000047835 LifrP42703 1092 aa21.27■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Gm21985Q6P6P5 1106 aa21.27■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Api5O35841 504 aaKnown RBP21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Pram1Q6BCL1 675 aa21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 DlatQ8BMF4 642 aa21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Fam184aE9PW83 1143 aa21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Ccdc102aQ3TMW1 549 aa21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Ppp1r9bQ6R891 817 aaKnown RBP21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Zbtb43Q9DAI4 467 aa21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Abca5Q8K448 1642 aa21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Brms1Q99N20 246 aa21.26■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Snap23O09044 210 aa21.25■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Pdia3P27773 505 aaKnown RBP21.25■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Adgrl3Q80TS3 1537 aa21.25■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Tbc1d2bQ3U0J8 965 aa21.25■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Tbc1d32Q3URV1 1296 aa21.25■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Zbtb45Q52KG4 520 aa21.25■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Ier5O89113 308 aa21.25■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Kmt5bQ3U8K7 883 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Miga2Q8BK03 593 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Eif4g3Q80XI3 1579 aaKnown RBP21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 ImpactO55091 318 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 U2af1l4Q8BGJ9 220 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Fam13bQ8K2H3 851 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Nfxl1E9Q8I7 918 aaKnown RBP21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Aifm3Q3TY86 605 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Tsg101Q61187 391 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Matr3Q8K310 846 aaKnown RBP21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Ginm1Q91WR6 327 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Tmod2Q9JKK7 351 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Dnm1P39053 867 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Vps16Q920Q4 839 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 LlphQ9D945 130 aaKnown RBP21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Mrpl12Q9DB15 201 aaKnown RBP21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Plekhg2Q6KAU7 1340 aa21.24■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Cavin2Q63918 418 aaKnown RBP21.23■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Efcab6Q6P1E8 1516 aa21.23■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Zscan29E9Q5B4 869 aa21.23■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Myo1bP46735 1107 aa21.23■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Rapgef3Q8VCC8 918 aa21.23■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Brd1E9PZ26 1189 aaKnown RBP21.23■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Slx4ipQ9D7Y9 413 aa21.22■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Dennd3A2RT67 1274 aa21.22■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Ankrd50F7BE84 1390 aa21.22■□□□□ 0.99
Scaf11-201ENSMUST00000047835 NmiO35309 314 aa21.22■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Rab3gap1Q80UJ7 981 aa21.22■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Myl3P09542 204 aa21.22■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Ampd3O08739 766 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Abtb2Q7TQI7 1024 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Cc2d1bQ8BRN9 848 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Bag4Q8CI61 457 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 LratQ9JI60 231 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Tacc1Q6Y685 774 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Sh3d21Q7TSG5 549 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Sdc2P43407 202 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 2310002L09RikQ9D7L5 217 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Pafah1b1P63005 410 aaKnown RBP21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Esco1Q69Z69 843 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Igbp1bQ9QZ29 343 aa21.21■□□□□ 0.99
Scaf11-201ENSMUST00000047835 Kdm5cP41230 1554 aa21.2■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Cops6O88545 324 aa21.2■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Pla2g4fQ50L41 855 aa21.2■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Olr1Q9EQ09 363 aa21.2■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Edc4Q3UJB9 1406 aaKnown RBP21.2■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Prr29B1ARI9 187 aa21.2■□□□□ 0.98
Scaf11-201ENSMUST00000047835 CenppQ9CZ92 286 aa21.2■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Irs4Q9Z0Y7 1216 aa21.2■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Vps54Q5SPW0 977 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Psrc1Q9D0P7 329 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Pik3ap1Q9EQ32 811 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Nphp4P59240 1425 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Trim25Q61510 634 aaKnown RBP21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Arhgef11Q68FM7 1552 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Mdm2P23804 489 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Mcm4P49717 862 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Erlin2Q8BFZ9 340 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Mipol1Q9D9F8 279 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Rdm1Q9CQK3 281 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 CpvlQ9D3S9 478 aa21.19■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Fmn2Q9JL04 1578 aa21.18■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Phkg2Q9DB30 406 aa21.18■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Slc4a8Q8JZR6 1089 aa21.18■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Pbrm1Q8BSQ9 1634 aaKnown RBP21.18■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Aldh8a1Q8BH00 487 aa21.18■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms