RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 GLDCP23378 1020 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 LEG1Q6P5S2 330 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 BEND4Q6ZU67 534 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 CNTN4Q8IWV2 1026 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 DEFB123Q8N688 67 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 TRMT10AQ8TBZ6 339 aaKnown RBP11.28□□□□□ -0.6
NEK9-210ENST00000557026 DHRS4Q9BTZ2 278 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 PRDM9Q9NQV7 894 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 STUB1Q9UNE7 303 aa11.28□□□□□ -0.6
NEK9-210ENST00000557026 LRP5LA4QPB2 252 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 MKRN2OSH3BPM6 223 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 PRRG2O14669 202 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 TYROBPO43914 113 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 VAMP5O95183 116 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 MT-ND1P03886 318 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 GGT1P19440 569 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 HOXD9P28356 352 aaPredicted RBP11.27□□□□□ -0.6
NEK9-210ENST00000557026 NAA10P41227 235 aaPredicted RBP11.27□□□□□ -0.6
NEK9-210ENST00000557026 RBM39Q14498 530 aaKnown RBP11.27□□□□□ -0.6
NEK9-210ENST00000557026 PLGLAQ15195 96 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 CLPPQ16740 277 aaPredicted RBP11.27□□□□□ -0.6
NEK9-210ENST00000557026 TMEM240Q5SV17 173 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 ALKAL1Q6UXT8 129 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 TECPR1Q7Z6L1 1165 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.6
NEK9-210ENST00000557026 ZNF611Q8N823 705 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 OR5AR1Q8NGP9 310 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 MED17Q9NVC6 651 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 CAMK2AQ9UQM7 478 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 C4AP0C0L4 1744 aa11.27□□□□□ -0.6
NEK9-210ENST00000557026 BTBD17A6NE02 478 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 ZNF850A8MQ14 1090 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 LINC01387J3KSC0 135 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 RDH16O75452 317 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 CXCL10P02778 98 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 RAB3AP20336 220 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 DCTP40126 519 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 ZNF81P51508 661 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 AIMP2Q13155 320 aaKnown RBP11.27□□□□□ -0.61
NEK9-210ENST00000557026 TMEM69Q5SWH9 247 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 DCST2Q5T1A1 773 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 RAB12Q6IQ22 244 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 ADIPOR2Q86V24 386 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 GATSQ8NAP1 163 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 SARAFQ96BY9 339 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 ZNF583Q96ND8 569 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 PAAF1Q9BRP4 392 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 CCDC32Q9BV29 185 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 C1orf105O95561 183 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 RNASE10Q5GAN6 216 aaKnown RBP11.27□□□□□ -0.61
NEK9-210ENST00000557026 CARD17Q5XLA6 110 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 SLC22A10Q63ZE4 541 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 HSD11B1LQ7Z5J1 315 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 OR51A7Q8NH64 312 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 THAP3Q8WTV1 239 aaPredicted RBP11.27□□□□□ -0.61
NEK9-210ENST00000557026 PCDHAC1Q9H158 963 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 CH25HO95992 272 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 YES1P07947 543 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 TMEM225BP0DP42 221 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 MAGP20916 626 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 MMP12P39900 470 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 TSPAN33Q86UF1 283 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 OR5AK2Q8NH90 309 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 NEIL3Q8TAT5 605 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 FCRL3Q96P31 734 aaPredicted RBP11.27□□□□□ -0.61
NEK9-210ENST00000557026 FIZ1Q96SL8 496 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 ATG5Q9H1Y0 275 aa11.27□□□□□ -0.61
NEK9-210ENST00000557026 MYH2Q9UKX2 1941 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 SCN11AQ9UI33 1791 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 A0A0A6YYC8 382 aaPredicted RBP11.26□□□□□ -0.61
NEK9-210ENST00000557026 I3L1I5 382 aaPredicted RBP11.26□□□□□ -0.61
NEK9-210ENST00000557026 SOCS2O14508 198 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 XPNPEP2O43895 674 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 EIF4E2O60573 245 aaKnown RBP11.26□□□□□ -0.61
NEK9-210ENST00000557026 EGFP01133 1207 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
NEK9-210ENST00000557026 POU3F4P49335 361 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 GRK1Q15835 563 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 FAM76BQ5HYJ3 339 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 WDR88Q6ZMY6 472 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 OR4K5Q8NGD3 323 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 OR5D14Q8NGL3 314 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 LRRC20Q8TCA0 184 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ACOT11Q8WXI4 607 aaPredicted RBP11.26□□□□□ -0.61
NEK9-210ENST00000557026 SNAPC3Q92966 411 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 LYRM4Q9HD34 91 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 FEZF1A0PJY2 475 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 GBAP04062 536 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 CKMT1AP12532 417 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ADH6P28332 368 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 S100A10P60903 97 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 TNFRSF17Q02223 184 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 BNIP3Q12983 259 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 MSMO1Q15800 293 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ACTBL2Q562R1 376 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 FIGNL1Q6PIW4 674 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ISCA2Q86U28 154 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 TMEM239Q8WW34 195 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms