RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 LANCL1O43813 399 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 STX11O75558 287 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 IDH1O75874 414 aaKnown RBP3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 DUSP14O95147 198 aaKnown RBP3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 CSF2P04141 144 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 SLC35E2P0CK97 266 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 GNPDA1P46926 289 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 NTHL1P78549 312 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 NUCB2P80303 420 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 BDH1Q02338 343 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 CD47Q08722 323 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 ASAH1Q13510 395 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 TGIF1Q15583 401 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 GSG1Q2KHT4 349 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 TEX44Q53QW1 395 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 RIPPLY2Q5TAB7 128 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 STAC2Q6ZMT1 411 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 CADM2Q8N3J6 435 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 BPIFB2Q8N4F0 458 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 ZSCAN4Q8NAM6 433 aaPredicted RBP3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 CCDC26Q8TAB7 109 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 IL1F10Q8WWZ1 152 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 SDSLQ96GA7 329 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 AKR1E2Q96JD6 320 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 SIGLEC12Q96PQ1 595 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 DHX33Q9H6R0 707 aaKnown RBP3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 MEPEQ9NQ76 525 aaPredicted RBP3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 SLC35D1Q9NTN3 355 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 METP08581 1390 aa3.48□□□□□ -1.85
SMNDC1-205ENST00000477763 FAM220BPB1ANY3 271 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 CLDN5O00501 218 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 SDHDO14521 159 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 DUX1O43812 170 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 NOL4O94818 638 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 GDF1P27539 372 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 NF2P35240 595 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 NOVA1P51513 510 aaKnown RBP3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 CXCL6P80162 114 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 TPD52L1Q16890 204 aaPredicted RBP3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 QRICH1Q2TAL8 776 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 SLC22A10Q63ZE4 541 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 ASPHD2Q6ICH7 369 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 CBLN3Q6UW01 205 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 CYS1Q717R9 158 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 HSD11B1LQ7Z5J1 315 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 CSNK1A1LQ8N752 337 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 OR10T2Q8NGX3 314 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 DHTKD1Q96HY7 919 aaPredicted RBP3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 TESK2Q96S53 571 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 TPPP3Q9BW30 176 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 GLT8D2Q9H1C3 349 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 POLR3FQ9H1D9 316 aaPredicted RBP3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 RIBC2Q9H4K1 309 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 UTP6Q9NYH9 597 aaKnown RBP3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 SLC2A6Q9UGQ3 507 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 CYTH4Q9UIA0 394 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 SH3BGRL2Q9UJC5 107 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 TP53TG3Q9ULZ0 132 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 B9D1Q9UPM9 204 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 SPACA6W5XKT8 324 aa3.47□□□□□ -1.85
SMNDC1-205ENST00000477763 A0A1B0GWJ7 208 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 FAM74A7A6NL05 159 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 E9PLD3 99 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 NDC80O14777 642 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 PEX11AO75192 247 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 GUCA1CO95843 209 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 MBD3O95983 291 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 XRCC1P18887 633 aaPredicted RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 ATP5A1P25705 553 aaKnown RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 PRKAR2BP31323 418 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 HPDP32754 393 aaPredicted RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 RPL4P36578 427 aaKnown RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 DLSTP36957 453 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 ACAA2P42765 397 aaKnown RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 KCNJ11Q14654 390 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 LINC01620Q4KN68 170 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 FAM74A3Q4VXF1 159 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 UTF1Q5T230 341 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 ZNF57Q68EA5 555 aaPredicted RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 OR8G2PQ6IF36 304 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 CGB2Q6NT52 195 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 PAMR1Q6UXH9 720 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 LANCL3Q6ZV70 420 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 ANKRD37Q7Z713 158 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 ZBED8Q8IZ13 594 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 FADS6Q8N9I5 356 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 ZPLD1Q8TCW7 415 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 GTSF1Q8WW33 167 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 SYAP1Q96A49 352 aaPredicted RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 SERAC1Q96JX3 654 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 CASD1Q96PB1 797 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 TMEM121Q9BTD3 319 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 TM2D1Q9BX74 207 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 FARSBQ9NSD9 589 aaKnown RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 MRPL39Q9NYK5 338 aaKnown RBP3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 LAMP5Q9UJQ1 280 aa3.46□□□□□ -1.86
SMNDC1-205ENST00000477763 PPIAL4CA0A0B4J2A2 164 aa3.45□□□□□ -1.86
SMNDC1-205ENST00000477763 IGHV3-35A0A0C4DH35 117 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms