RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CAVIN3Q969G5 261 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 METTL2AQ96IZ6 378 aaKnown RBP20.48■□□□□ 0.87
USP42-205ENST00000465073 MARK4Q96L34 752 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 UBTD1Q9HAC8 227 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 ARID1AO14497 2285 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 G3V2L1 256 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 KCNH1O95259 989 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 ANGPTL1O95841 491 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 HEXAP06865 529 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 TBXA2RP21731 343 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 SGCBQ16585 318 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 C20orf204Q6ZNR8 217 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 FRMD7Q6ZUT3 714 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 ZNF550Q7Z398 422 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 IFT20Q8IY31 132 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 CCL19Q99731 98 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 EMCNQ9ULC0 261 aa20.47■□□□□ 0.87
USP42-205ENST00000465073 MZB1Q8WU39 189 aa20.46■□□□□ 0.87
USP42-205ENST00000465073 ARSGQ96EG1 525 aa20.46■□□□□ 0.87
USP42-205ENST00000465073 COX4I2Q96KJ9 171 aa20.46■□□□□ 0.87
USP42-205ENST00000465073 GXYLT2A0PJZ3 443 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 AQP8O94778 261 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 PRPS2P11908 318 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 SLC29A2Q14542 456 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 GRAMD1BQ3KR37 738 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 VPS26BQ4G0F5 336 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 CFAP157Q5JU67 520 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 APOOLQ6UXV4 268 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 ZNF551Q7Z340 670 aaPredicted RBP20.45■□□□□ 0.86
USP42-205ENST00000465073 GGNQ86UU5 652 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 GPR151Q8TDV0 419 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 HOXB13Q92826 284 aaPredicted RBP20.45■□□□□ 0.86
USP42-205ENST00000465073 ZC3HAV1LQ96H79 300 aaKnown RBP20.45■□□□□ 0.86
USP42-205ENST00000465073 BDH2Q9BUT1 245 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 PRRG4Q9BZD6 226 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 KLHL4Q9C0H6 718 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 PLSCR4Q9NRQ2 329 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 TBK1Q9UHD2 729 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 EMC9Q9Y3B6 208 aa20.45■□□□□ 0.86
USP42-205ENST00000465073 A0A087WZY1 265 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 GLRA3O75311 464 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 SEC22BO75396 215 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 IGKV1D-16P01601 117 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 ZNF17P17021 662 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 DNAJB13P59910 316 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 KIAA0040Q15053 153 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 CEP70Q8NHQ1 597 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 ZNF764Q96H86 408 aaPredicted RBP20.44■□□□□ 0.86
USP42-205ENST00000465073 EGLN2Q96KS0 407 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 Q96MF0 132 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 HS3ST6Q96QI5 342 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 IQCGQ9H095 443 aaKnown RBP20.44■□□□□ 0.86
USP42-205ENST00000465073 EQTNQ9NQ60 294 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 PAQR5Q9NXK6 330 aaPredicted RBP20.44■□□□□ 0.86
USP42-205ENST00000465073 CCL27Q9Y4X3 112 aa20.44■□□□□ 0.86
USP42-205ENST00000465073 H7C1Q1 480 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 PDPK1O15530 556 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 GMFGO60234 142 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 LY6G6DO95868 133 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 PROCP04070 461 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 NGFRP08138 427 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 UROSP10746 265 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 PPP3CBP16298 524 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 PRPH2P23942 346 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 LOXP28300 417 aaPredicted RBP20.43■□□□□ 0.86
USP42-205ENST00000465073 MAP3K8P41279 467 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 EIF1AXP47813 144 aaKnown RBP20.43■□□□□ 0.86
USP42-205ENST00000465073 HSPB3Q12988 150 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 ANKRD34AQ69YU3 496 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 C22orf34Q6ZV56 151 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 YTHDF3Q7Z739 585 aaKnown RBP20.43■□□□□ 0.86
USP42-205ENST00000465073 WDR75Q8IWA0 830 aaKnown RBP20.43■□□□□ 0.86
USP42-205ENST00000465073 OR6K3Q8NGY3 331 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 PIK3R3Q92569 461 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 GMPPAQ96IJ6 420 aaPredicted RBP20.43■□□□□ 0.86
USP42-205ENST00000465073 VDAC3Q9Y277 283 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 UQCRHLA0A096LP55 91 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 A0A1W2PPM1 405 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 SHISA8B8ZZ34 492 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 ALG1L2C9J202 215 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 NPIPB8E9PQR5 432 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 EIF1AYO14602 144 aaKnown RBP20.43■□□□□ 0.86
USP42-205ENST00000465073 NKX2-2O95096 273 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 PLGP00747 810 aaPredicted RBP20.43■□□□□ 0.86
USP42-205ENST00000465073 GPC1P35052 558 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 SLC6A8P48029 635 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.43■□□□□ 0.86
USP42-205ENST00000465073 EXOC3L2Q2M3D2 409 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 CCDC153Q494R4 210 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 EXOC3L1Q86VI1 746 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 CDRT4Q8N9R6 151 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 ZFP28Q8NHY6 868 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 TXLNGYQ9BZA5 131 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 TNFRSF12AQ9NP84 129 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 C1orf109Q9NX04 203 aa20.43■□□□□ 0.86
USP42-205ENST00000465073 PCNX3Q9H6A9 2034 aa20.42■□□□□ 0.86
USP42-205ENST00000465073 FN1P02751 2386 aaKnown RBP20.42■□□□□ 0.86
USP42-205ENST00000465073 SLC28A1O00337 649 aa20.42■□□□□ 0.86
USP42-205ENST00000465073 NDUFB5O43674 189 aa20.42■□□□□ 0.86
USP42-205ENST00000465073 FAM153BP0C7A2 387 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms