RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 NFU1Q9UMS0 254 aa16.11■□□□□ 0.17
CHCHD3-203ENST00000448878 MAGED1Q9Y5V3 778 aaPredicted RBP16.11■□□□□ 0.17
CHCHD3-203ENST00000448878 OVOL3O00110 214 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 MANBAO00462 879 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 TNFSF11O14788 317 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 PHF1O43189 567 aaPredicted RBP16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 KRT6AP02538 564 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 KRT6BP04259 564 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 IL11P20809 199 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 KRT6CP48668 564 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 NCBP2P52298 156 aaKnown RBP eCLIP16.1■□□□□ 0.176e-9■□□□□ 10.1
CHCHD3-203ENST00000448878 PSMD4P55036 377 aaKnown RBP16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 ACSM2AQ08AH3 577 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 ACSM2BQ68CK6 577 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 GTF2IRD2BQ6EKJ0 949 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 TMEM107Q6UX40 140 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 GTF2IRD2Q86UP8 949 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 LILRB1Q8NHL6 650 aaPredicted RBP16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 ZNF483Q8TF39 744 aaPredicted RBP16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 ALG2Q9H553 416 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 GLRX2Q9NS18 164 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 FBXO34Q9NWN3 711 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 PAQR5Q9NXK6 330 aaPredicted RBP16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 MXRA5Q9NR99 2828 aa16.1■□□□□ 0.17
CHCHD3-203ENST00000448878 NDUFS7O75251 213 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 UTS2O95399 124 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 NTN1O95631 604 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 IL33O95760 270 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 TUBBP07437 444 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 RPS17P08708 135 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 PSMB1P20618 241 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 IL32P24001 234 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 HMOX2P30519 316 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 ZNF844Q08AG5 666 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 C2orf80Q0P641 193 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 TRADDQ15628 312 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 PDSS1Q5T2R2 415 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 MFSD12Q6NUT3 480 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 ADAM5Q6NVV9 412 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 SPATA4Q8NEY3 305 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 REXO5Q96IC2 774 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 RHNO1Q9BSD3 238 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 HDHD5Q9BXW7 423 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 RAB17Q9H0T7 212 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 OR10A4Q9H209 315 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 TMEM185BQ9H7F4 350 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 DDX18Q9NVP1 670 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 PCNX3Q9H6A9 2034 aa16.09■□□□□ 0.17
CHCHD3-203ENST00000448878 SSX4O60224 188 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 ULK1O75385 1050 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 SUPT7LO94864 414 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 IGHV4-39P01824 125 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 FESP07332 822 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 HSD3B1P14060 373 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 HSD3B2P26439 372 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 GABRA3P34903 492 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 PHBP35232 272 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 RAE1P78406 368 aaKnown RBP16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 CLCQ05315 142 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 CSTF3Q12996 717 aaKnown RBP16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 TSNAXIP1Q2TAA8 658 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 SPIN4Q56A73 249 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 TMEM201Q5SNT2 666 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 NCMAPQ5T1S8 102 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 HBMQ6B0K9 141 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 FIGNL1Q6PIW4 674 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 GALNT10Q86SR1 603 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 GATSQ8NAP1 163 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 METTL6Q8TCB7 284 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 ROBO4Q8WZ75 1007 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 APIPQ96GX9 242 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 C3orf14Q9HBI5 128 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 GDF2Q9UK05 429 aaPredicted RBP16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 SNX8Q9Y5X2 465 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 ROS1P08922 2347 aa16.08■□□□□ 0.16
CHCHD3-203ENST00000448878 CR1P17927 2039 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 GPRIN2O60269 458 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 KCNH1O95259 989 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 INHBAP08476 426 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 ANXA4P09525 319 aaPredicted RBP16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 DANCRP0C864 163 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 ME2P23368 584 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 AGTR1P30556 359 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 HSD17B3P37058 310 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 GRAMD1BQ3KR37 738 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 ZNF672Q499Z4 452 aaPredicted RBP16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 KBTBD8Q8NFY9 601 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 OR2V1Q8NHB1 315 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 OSTF1Q92882 214 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 MRPL57Q9BQC6 102 aaKnown RBP16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 MRPL46Q9H2W6 279 aaKnown RBP16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 MIEF1Q9NQG6 463 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 ZNF225Q9UK10 706 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 C19orf53Q9UNZ5 99 aaPredicted RBP16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 STAB1Q9NY15 2570 aa16.07■□□□□ 0.16
CHCHD3-203ENST00000448878 SONP18583 2426 aaKnown RBP16.06■□□□□ 0.16
CHCHD3-203ENST00000448878 A0A087WV62 115 aa16.06■□□□□ 0.16
CHCHD3-203ENST00000448878 A0A0J9YW62 118 aa16.06■□□□□ 0.16
CHCHD3-203ENST00000448878 GXYLT2A0PJZ3 443 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms