RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TMEM68Q96MH6 324 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 HS6ST2Q96MM7 605 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 GPR62Q9BZJ7 368 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 METTL17Q9H7H0 456 aaPredicted RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 IER3IP1Q9Y5U9 82 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 GABRR3A8MPY1 467 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 C2orf74A8MZ97 194 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 GMDSO60547 372 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 CBR1P16152 277 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 CHATP28329 748 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 KLHDC8AQ8IYD2 350 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 ZNF689Q96CS4 500 aaPredicted RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 CHFRQ96EP1 664 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 LIN37Q96GY3 246 aaPredicted RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 ACKR4Q9NPB9 350 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 SLC16A8O95907 504 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 TFAP2AP05549 437 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 CASRP41180 1078 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 RACK1P63244 317 aaKnown RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 UNQ6126/PRO20091Q6UXV3 157 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 ZNF783Q6ZMS7 281 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 BCDIN3DQ7Z5W3 292 aaKnown RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 TTC9BQ8N6N2 239 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 ZSCAN4Q8NAM6 433 aaPredicted RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 HINT2Q9BX68 163 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 PRMT8Q9NR22 394 aaPredicted RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 ZNF701M0R085 212 aaPredicted RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 HMGB3O15347 200 aaKnown RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 SOCS5O75159 536 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 AKAIN1P0CW23 69 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 IL1RNP18510 177 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 SMAD2Q15796 467 aaKnown RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 TMEM175Q9BSA9 504 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 ACPTQ9BZG2 426 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 ARHGAP39Q9C0H5 1083 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 ZNF334Q9HCZ1 680 aaPredicted RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 KIAA0355O15063 1070 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 SYT7O43581 403 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 TPPPO94811 219 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 SDC1P18827 310 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 DAPP51397 102 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 RPS25P62851 125 aaKnown RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 ACY1Q03154 408 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 CHPT1Q8WUD6 406 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 DHRS4Q9BTZ2 278 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 CENPOQ9BU64 300 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 VRTNQ9H8Y1 702 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 ACTR10Q9NZ32 417 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 B3GNT3Q9Y2A9 372 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 GPR45Q9Y5Y3 372 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 POLR1CO15160 346 aaPredicted RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 SLC34A2O95436 690 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 IQCF3P0C7M6 154 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 TMEM225BP0DP42 221 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 GABRR1P24046 479 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 PCGF2P35227 344 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 GRM7Q14831 915 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 IRF7Q92985 503 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 ZNF300Q96RE9 604 aaPredicted RBP11.38□□□□□ -0.59
UBR4-205ENST00000417040 PPP4R1LQ9P1A2 415 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 SLCO3A1Q9UIG8 710 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 SLC6A5Q9Y345 797 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 MYH11P35749 1972 aa11.38□□□□□ -0.59
UBR4-205ENST00000417040 FOSL1P15407 271 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 RAB4AP20338 218 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 CD70P32970 193 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 CXCR4P61073 352 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ERN2Q76MJ5 926 aaKnown RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 GPR149Q86SP6 731 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 OR5AR1Q8NGP9 310 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 GMEB2Q9UKD1 530 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 GPR37L1O60883 481 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 STC2O76061 302 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 MPIG6BO95866 241 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 CPOXP36551 454 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 GPM6BQ13491 265 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 C14orf28Q4W4Y0 310 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ZNF585AQ6P3V2 769 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 CYS1Q717R9 158 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 VRK2Q86Y07 508 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ZFP82Q8N141 532 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 BBS1Q8NFJ9 593 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 BRI3BPQ8WY22 251 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 CDS1Q92903 461 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 FBXL2Q9UKC9 423 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 LIPT1Q9Y234 373 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ZNF888P0CJ79 500 aaPredicted RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 F3P13726 295 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 AKR1C2P52895 323 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ACTBP60709 375 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 ACTG1P63261 375 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 PODNL1Q6PEZ8 512 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 CHST14Q8NCH0 376 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 UHRF1Q96T88 793 aaPredicted RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 NXF5Q9H1B4 397 aaKnown RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 TESQ9UGI8 421 aaKnown RBP11.37□□□□□ -0.59
UBR4-205ENST00000417040 ATP6V1G2-DDX39BF2Z307 99 aa11.37□□□□□ -0.59
UBR4-205ENST00000417040 GABRPO00591 440 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms