RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 POU4F2Q12837 409 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 IRF5Q13568 498 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 PDGFRLQ15198 375 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 C3orf38Q5JPI3 329 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 OLIG3Q7RTU3 272 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 NUP54Q7Z3B4 507 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 GRASPQ7Z6J2 395 aaPredicted RBP16.82■□□□□ 0.28
SMG5-201ENST00000361813 MFFQ9GZY8 342 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 ASIC5Q9NY37 505 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 DIMT1Q9UNQ2 313 aaKnown RBP16.82■□□□□ 0.28
SMG5-201ENST00000361813 RABL2BQ9UNT1 228 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 WRBO00258 174 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 VEGFDO43915 354 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 SLC22A5O76082 557 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 GKN3PP0CG01 181 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 SHC1P29353 583 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 KCNJ10P78508 379 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 PCGF3Q3KNV8 242 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 IQCF2Q8IXL9 164 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 MFSD4AQ8N468 514 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 PINK1Q9BXM7 581 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 CXorf36Q9H7Y0 433 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 RBM7Q9Y580 266 aaKnown RBP16.82■□□□□ 0.28
SMG5-201ENST00000361813 COL4A1P02462 1669 aa16.82■□□□□ 0.28
SMG5-201ENST00000361813 FZD7O75084 574 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ELAVL4P26378 380 aaKnown RBP16.81■□□□□ 0.28
SMG5-201ENST00000361813 IMPA1P29218 277 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 PSMB10P40306 273 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ALKAL2Q6UX46 152 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ERN2Q76MJ5 926 aaKnown RBP16.81■□□□□ 0.28
SMG5-201ENST00000361813 OR9A2Q8NGT5 310 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ZNF436Q9C0F3 470 aaPredicted RBP16.81■□□□□ 0.28
SMG5-201ENST00000361813 SLC6A13Q9NSD5 602 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 MUTYHQ9UIF7 546 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 BACE2Q9Y5Z0 518 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 CSTAP01040 98 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 IL1RNP18510 177 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 POLR2CP19387 275 aaPredicted RBP16.81■□□□□ 0.28
SMG5-201ENST00000361813 CBX5P45973 191 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ELOAQ14241 798 aaKnown RBP16.81■□□□□ 0.28
SMG5-201ENST00000361813 PGGHGQ32M88 737 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 TMEM35AQ53FP2 167 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 VRK2Q86Y07 508 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 LNX2Q8N448 690 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 SMPDL3BQ92485 455 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 LRIG1Q96JA1 1093 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 TAPBPLQ9BX59 468 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 TBL1XR1Q9BZK7 514 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ACER3Q9NUN7 267 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 A0A1W2PQ45 241 aaPredicted RBP16.81■□□□□ 0.28
SMG5-201ENST00000361813 A0A1W2PQY0 241 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 B8ZZF3 427 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 KLK8O60259 260 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 KCNK2O95069 426 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 IGLV3-25P01717 112 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ZNF20P17024 532 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 PRKXP51817 358 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 BAK1Q16611 211 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 SLX4IPQ5VYV7 408 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 SLC9B2Q86UD5 537 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 DGAT2Q96PD7 388 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 SLC6A7Q99884 636 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ACTRT3Q9BYD9 372 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 GABARAPL1Q9H0R8 117 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 OR52D1Q9H346 318 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.81■□□□□ 0.28
SMG5-201ENST00000361813 TMPRSS11EQ9UL52 423 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 EDARQ9UNE0 448 aa16.81■□□□□ 0.28
SMG5-201ENST00000361813 C11orf98E9PRG8 122 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 CASC3O15234 703 aaKnown RBP16.8■□□□□ 0.28
SMG5-201ENST00000361813 CDC123O75794 336 aaPredicted RBP16.8■□□□□ 0.28
SMG5-201ENST00000361813 SC5DO75845 299 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 SCGB1D2O95969 90 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 FURINP09958 794 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 SNRPBP14678 240 aaKnown RBP16.8■□□□□ 0.28
SMG5-201ENST00000361813 OC90Q02509 493 aaPredicted RBP16.8■□□□□ 0.28
SMG5-201ENST00000361813 ALG10BQ5I7T1 473 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 TMEM173Q86WV6 379 aaPredicted RBP16.8■□□□□ 0.28
SMG5-201ENST00000361813 RBM45Q8IUH3 476 aaKnown RBP16.8■□□□□ 0.28
SMG5-201ENST00000361813 MSLNLQ96KJ4 702 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 ALOXE3Q9BYJ1 711 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 SYT4Q9H2B2 425 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 MED20Q9H944 212 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 PGAP2Q9UHJ9 254 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 B4DXG7 233 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 EEF1E1-BLOC1S5C9J1V9 151 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 TRAPPC2P0DI81 140 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 TRAPPC2BP0DI82 140 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 CCSMST1Q4G0I0 132 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 C6orf132Q5T0Z8 1188 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 GLT8D1Q68CQ7 371 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 ZNF584Q8IVC4 421 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 OR2L2Q8NH16 312 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 TMEM41AQ96HV5 264 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 PRR14Q9BWN1 585 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 PCDHB16Q9NRJ7 776 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 PNO1Q9NRX1 252 aaKnown RBP16.8■□□□□ 0.28
SMG5-201ENST00000361813 RXFP3Q9NSD7 469 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 ERVK-19Q9WJR5 959 aa16.8■□□□□ 0.28
SMG5-201ENST00000361813 HOXC11O43248 304 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms