RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 UBE3DQ7Z6J8 389 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 ZNF655Q8N720 491 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 LRIG1Q96JA1 1093 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 CLEC4AQ9UMR7 237 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 U3KQ87 197 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 IGHA1P01876 353 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 GAAP10253 952 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 SHC1P29353 583 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 AHRP35869 848 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 SP3Q02447 781 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 TGM3Q08188 693 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 PGGHGQ32M88 737 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 AMZ2Q86W34 360 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 ZNF680Q8NEM1 530 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 OR2T33Q8NG76 320 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 KLHL28Q9NXS3 571 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 GLTPQ9NZD2 209 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 NTNG1Q9Y2I2 539 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 WNT6Q9Y6F9 365 aa16.28■□□□□ 0.2
ARHGEF1-213ENST00000595897 LOC105371267A0A1B0GV96 52 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 B8ZZF3 427 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 TFPIP10646 304 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 ANXA3P12429 323 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 C6P13671 934 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 DRD2P14416 443 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 M6PRP20645 277 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 TRHRP34981 398 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 RGS8P57771 180 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 ST8SIA6P61647 398 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 SMARCD3Q6STE5 483 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 ARL9Q6T311 187 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 GPR135Q8IZ08 494 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 ACBD7Q8N6N7 88 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 TCEAL4Q96EI5 215 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 ZNF649Q9BS31 505 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.27■□□□□ 0.22e-8■■□□□ 12.7
ARHGEF1-213ENST00000595897 DPAGT1Q9H3H5 408 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 HINT3Q9NQE9 182 aaKnown RBP16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 BABAM2Q9NXR7 383 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 CBLCQ9ULV8 474 aa16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 EXOGQ9Y2C4 368 aaKnown RBP16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 PCYT1BQ9Y5K3 369 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF1-213ENST00000595897 LCMT2O60294 686 aaKnown RBP16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 AHCYP23526 432 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 STAT5AP42229 794 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 GCGRP47871 477 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 TM4SF4P48230 202 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 FAM27D1Q5T7N8 215 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 PLBD1Q6P4A8 553 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 CXXC5Q7LFL8 322 aaKnown RBP16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 OR11H7Q8NGC8 314 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 LRRC20Q8TCA0 184 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 DIO2Q92813 273 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 CCDC120Q96HB5 630 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 LINC00615Q96LM1 132 aaPredicted RBP16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 UBL7Q96S82 380 aaPredicted RBP16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 SMAD5Q99717 465 aaKnown RBP16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 MACROD1Q9BQ69 325 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 MRPL39Q9NYK5 338 aaKnown RBP16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 IL20Q9NYY1 176 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 KCNN3Q9UGI6 736 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 GPR34Q9UPC5 381 aa16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 MRPS7Q9Y2R9 242 aaKnown RBP16.27■□□□□ 0.19
ARHGEF1-213ENST00000595897 LOC105369274A0A096LPK9 316 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 FPR3P25089 353 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 RBMS1P29558 406 aaKnown RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 SLC16A1P53985 500 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 REEP5Q00765 189 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 SLC9A5Q14940 896 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 OAFQ86UD1 273 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 OR4N4Q8N0Y3 316 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 OR6C4Q8NGE1 309 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 ACOT11Q8WXI4 607 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 SAMD8Q96LT4 415 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 ALG8Q9BVK2 526 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 HMX1Q9NP08 348 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 WASH6PQ9NQA3 447 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 UCKL1Q9NWZ5 548 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 IRAK3Q9Y616 596 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 SIRT4Q9Y6E7 314 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 I3L521 148 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 PAPLNO95428 1278 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 RNF144AP50876 292 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 OR10A3P58181 314 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 C16orf62Q7Z3J2 963 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 LSRQ86X29 649 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 GPR137Q96N19 417 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 MED17Q9NVC6 651 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 ELF5Q9UKW6 265 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 ENTPD4Q9Y227 616 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 TEX13CA0A0J9YWL9 993 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 ZC3H12DA2A288 527 aaKnown RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 PGRMC2O15173 223 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 SHOXO15266 292 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 PIP5K1CO60331 668 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 HMGN1P05114 100 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 NDUFV2P19404 249 aa16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 DBPQ10586 325 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-213ENST00000595897 FGFBP1Q14512 234 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 368.8 ms