RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MRPS18CQ9Y3D5 142 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 APCP25054 2843 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 SCO2O43819 266 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 TOXO94900 526 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 UTS2O95399 124 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 C6orf47O95873 294 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 SRD5A2P31213 254 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 GFRA1P56159 465 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 TFF3Q07654 80 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 DUSP5Q16690 384 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 VPS26BQ4G0F5 336 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 ACSF3Q4G176 576 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 ZCCHC12Q6PEW1 402 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 APOOLQ6UXV4 268 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 SZRD1Q7Z422 152 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 LIX1LQ8IVB5 337 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 KIRREL3Q8IZU9 778 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 FADS6Q8N9I5 356 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 FBXO30Q8TB52 745 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 YIPF4Q9BSR8 244 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 DUSP26Q9BV47 211 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 BHLHE41Q9C0J9 482 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 THAP1Q9NVV9 213 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 FAM120CQ9NX05 1096 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 TAS2R10Q9NYW0 307 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 ARHGAP21Q5T5U3 1957 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 ABCA12Q86UK0 2595 aa16.8■□□□□ 0.28
SHKBP1-202ENST00000593764 LRBAP50851 2863 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 ANKRD28O15084 1053 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 KCNK2O95069 426 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 KCNH1O95259 989 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 EPPINO95925 133 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 ACTL6AO96019 429 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 HMGN2P05204 90 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 SNRPB2P08579 225 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 RFX3P48380 749 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 CCT3P49368 545 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 PSMD4P55036 377 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 WNT3P56703 355 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 PRR5P85299 388 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 GRAMD1BQ3KR37 738 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 RIPPLY2Q5TAB7 128 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 ZAR1Q86SH2 424 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 GALNT10Q86SR1 603 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 MARCH3Q86UD3 253 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 TRIM42Q8IWZ5 723 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 PM20D2Q8IYS1 436 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 OR2M3Q8NG83 312 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 OR14L1PQ8NHC6 308 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 ARL8AQ96BM9 186 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 OTUB1Q96FW1 271 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 ENKD1Q9H0I2 346 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 DSN1Q9H410 356 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 ZCCHC3Q9NUD5 404 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 FBXO34Q9NWN3 711 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 CAMK2AQ9UQM7 478 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 SNX8Q9Y5X2 465 aa16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 INTS1Q8N201 2190 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-202ENST00000593764 NKX2-6A6NCS4 301 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 SDHDO14521 159 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 CPN1P15169 458 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 DPP4P27487 766 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 ZFP36L2P47974 494 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 HBA1P69905 142 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 LASP1Q14847 261 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 PGS1Q32NB8 556 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 LSM12Q3MHD2 195 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 LRRC34Q8IZ02 419 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 OR4C3Q8NH37 302 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 DUSP19Q8WTR2 217 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 NPDC1Q9NQX5 325 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 GPATCH2Q9NW75 528 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 MED11Q9P086 117 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 PPP4R1LQ9P1A2 415 aa16.78■□□□□ 0.28
SHKBP1-202ENST00000593764 HCFC1P51610 2035 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 KIAA1549Q9HCM3 1950 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 FAM90A27PA6NNH2 459 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 SCN2BO60939 215 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 ALOX5P09917 674 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 COX6B1P14854 86 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 LBPP18428 481 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 CEACAM8P31997 349 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 PRIM2P49643 509 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 DSCR4P56555 118 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 B3GALT5-AS1P59052 145 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 PHC1P78364 1004 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 OCRLQ01968 901 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 STX5Q13190 355 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 AGBL2Q5U5Z8 902 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 NSUN5P2Q63ZY6 315 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 OR4F3Q6IEY1 312 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 OGFOD2Q6N063 350 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 FIGNL1Q6PIW4 674 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 IFNEQ86WN2 208 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 MCEMP1Q8IX19 187 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 NAXEQ8NCW5 288 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 TNIP2Q8NFZ5 429 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 OR4K17Q8NGC6 315 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 OR8J2Q8NGG1 315 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms