RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TRIB2Q92519 343 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 HIPK2Q9H2X6 1198 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 GPN2Q9H9Y4 310 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 MEIOCA2RUB1 952 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 TGOLN2O43493 480 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 KLF8O95600 359 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SNRNP70P08621 437 aaKnown RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 MAOAP21397 527 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CSNK2A1P68400 391 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 RBM39Q14498 530 aaKnown RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ARL6IP1Q15041 203 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 TMEM150AQ86TG1 271 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CSNK2A3Q8NEV1 391 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 OR5L2Q8NGL0 311 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 HUS1BQ8NHY5 278 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ZFP90Q8TF47 636 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 DCUN1D4Q92564 292 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 FEVQ99581 238 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SYT17Q9BSW7 474 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 NUDT9Q9BW91 350 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 TEX10Q9NXF1 929 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 GPR34Q9UPC5 381 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 APBB3O95704 486 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 AQP2P41181 271 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 GSTM4Q03013 218 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 PEA15Q15121 130 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 CREB3L2Q70SY1 520 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 GALNT10Q86SR1 603 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SEMA6DQ8NFY4 1073 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 OR4K13Q8NH42 304 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ECHDC3Q96DC8 303 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 MYRFLQ96LU7 910 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 TGM7Q96PF1 710 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SLC6A16Q9GZN6 736 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 B3GNT3Q9Y2A9 372 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ASB4Q9Y574 426 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 A0A1W2PQL4 384 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-208ENST00000538570 PIRO00625 290 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 DUX1O43812 170 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 LILRB5O75023 590 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 MITFO75030 526 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ACTL6BO94805 426 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 FDXRP22570 491 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 TGM4P49221 684 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 NDUFA6P56556 154 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 PCGF3Q3KNV8 242 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 METTL11BQ5VVY1 283 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 UNC5DQ6UXZ4 953 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF551Q7Z340 670 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-208ENST00000538570 KCTD20Q7Z5Y7 419 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 GAB3Q8WWW8 586 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 FRZBQ92765 325 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ADIPOR1Q96A54 375 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 LMF1Q96S06 567 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 DPH7Q9BTV6 452 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SAMD10Q9BYL1 202 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 APMAPQ9HDC9 416 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ABRACLQ9P1F3 81 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SIX4Q9UIU6 781 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 PCTPQ9UKL6 214 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 LSM5Q9Y4Y9 91 aaKnown RBP9.43□□□□□ -0.9
COL4A6-208ENST00000538570 AFDNP55196 1824 aaKnown RBP9.43□□□□□ -0.9
COL4A6-208ENST00000538570 TCRBV21S2A2A0A5A6 115 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ANKRD33BA6NCL7 494 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 BCAS1O75363 584 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-208ENST00000538570 TMEM225BP0DP42 221 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 OSMP13725 252 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF136P52737 540 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 GPR85P60893 370 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ESCO2Q56NI9 601 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 AGAP6Q5VW22 663 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 RHOUQ7L0Q8 258 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 TRAPPC6BQ86SZ2 158 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 OR52N2Q8NGI0 321 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ADAMTS19Q8TE59 1207 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 AGAP4Q96P64 663 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SCPEP1Q9HB40 452 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SPHK2Q9NRA0 654 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 TRAV18A0A075B6X5 111 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ETFAP13804 333 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 HSD17B1P14061 328 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 UGT2B7P16662 529 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF695Q8IW36 515 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SIMC1Q8NDZ2 872 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 OR51T1Q8NGJ9 327 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 TMEM181Q9P2C4 612 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SLC45A1Q9Y2W3 748 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 NUBP2Q9Y5Y2 271 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 RNGTTO60942 597 aaKnown RBP9.43□□□□□ -0.9
COL4A6-208ENST00000538570 DRD5P21918 477 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 IDUAP35475 653 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SCGB2A2Q13296 93 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 RAB31Q13636 194 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 LIX1LQ8IVB5 337 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SLC35F2Q8IXU6 374 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 OR4C5Q8NGB2 326 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 TMEM19Q96HH6 336 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 SLC2A13Q96QE2 648 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 VRK1Q99986 396 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms