RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SEC14L3Q9UDX4 400 aa11.73□□□□□ -0.53
VEGFA-224ENST00000523873 MRTO4Q9UKD2 239 aaKnown RBP11.73□□□□□ -0.53
VEGFA-224ENST00000523873 BOKQ9UMX3 212 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-224ENST00000523873 GMNCA6NCL1 334 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 ANKRD33BA6NCL7 494 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 ANKUB1A6NFN9 424 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 ACOT7O00154 380 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 SNPHO15079 494 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 FADS1O60427 444 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 KRT16P08779 473 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 HOXB9P17482 250 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-224ENST00000523873 EVI2BP34910 448 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 GAS1P54826 345 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 PSPHP78330 225 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 LRRC74AQ0VAA2 488 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 FUT5Q11128 374 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 STX5Q13190 355 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 EIF2S3LQ2VIR3 472 aaKnown RBP11.72□□□□□ -0.53
VEGFA-224ENST00000523873 TBCELQ5QJ74 424 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.72□□□□□ -0.531e-7■□□□□ 10.9
VEGFA-224ENST00000523873 METTL21CQ5VZV1 264 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 SLC30A6Q6NXT4 461 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 APOOLQ6UXV4 268 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 SPATA21Q7Z572 469 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 MSRB3Q8IXL7 192 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 FAM109AQ8N4B1 249 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 GATSQ8NAP1 163 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 GALNT11Q8NCW6 608 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 ST6GALNAC3Q8NDV1 305 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 RNF138Q8WVD3 245 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 XAGE5Q8WWM1 108 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 TMEM41AQ96HV5 264 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 GNRHR2Q96P88 292 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 ZNF703Q9H7S9 590 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-224ENST00000523873 ZFP64Q9NPA5 681 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
VEGFA-224ENST00000523873 SLC25A37Q9NYZ2 338 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 ARMCX1Q9P291 453 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 PCDHB14Q9Y5E9 798 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 WIF1Q9Y5W5 379 aa11.72□□□□□ -0.53
VEGFA-224ENST00000523873 A0A1W2PP18 115 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 PRAMEF27A3QJZ7 478 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 ASNA1O43681 348 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 GMFGO60234 142 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 SNX4O95219 450 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-224ENST00000523873 OXSR1O95747 527 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-224ENST00000523873 TCEA1P23193 301 aaKnown RBP11.71□□□□□ -0.53
VEGFA-224ENST00000523873 GDF1P27539 372 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 TRPC1P48995 793 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 KHKP50053 298 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 MVDP53602 400 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 PSMD4P55036 377 aaKnown RBP11.71□□□□□ -0.53
VEGFA-224ENST00000523873 KLF10Q13118 480 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.71□□□□□ -0.53
VEGFA-224ENST00000523873 TMEM81Q6P7N7 255 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 FGD2Q7Z6J4 655 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 HMGN2P46Q86SG4 172 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 PACS2Q86VP3 889 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 RETREG3Q86VR2 466 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 SLC22A16Q86VW1 577 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 SPPL2CQ8IUH8 684 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 TRIML2Q8N7C3 387 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 WDSUB1Q8N9V3 476 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 OR4C3Q8NH37 302 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 PRR7Q8TB68 274 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 MIPOL1Q8TD10 442 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 SDF2Q99470 211 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 NMUR2Q9GZQ4 415 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 SLC6A15Q9H2J7 730 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 TPT1P8Q9HAU6 139 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 FBXL2Q9UKC9 423 aa11.71□□□□□ -0.53
VEGFA-224ENST00000523873 KALRNO60229 2985 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 KIAA1549Q9HCM3 1950 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 A0A096LPI6 279 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 CENPVL1A0A0U1RR11 272 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 A0A1B0GTH9 108 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 HMGN4O00479 90 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 FBP2O00757 339 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 TRAPPC6AO75865 159 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 WISP1O95388 367 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 SNRPB2P08579 225 aaKnown RBP11.7□□□□□ -0.54
VEGFA-224ENST00000523873 ZCCHC18P0CG32 403 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 ETFAP13804 333 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 ATP6V1C1P21283 382 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 IRX1P78414 480 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-224ENST00000523873 ELOAQ14241 798 aaKnown RBP11.7□□□□□ -0.54
VEGFA-224ENST00000523873 TOMM20Q15388 145 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 GPR68Q15743 365 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 HYAL4Q2M3T9 481 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 ARHGAP11BQ3KRB8 267 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 TIGD3Q6B0B8 471 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 HEPHL1Q6MZM0 1159 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 C16orf62Q7Z3J2 963 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 CPLX4Q7Z7G2 160 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 CHERPQ8IWX8 916 aaKnown RBP11.7□□□□□ -0.54
VEGFA-224ENST00000523873 ANKFN1Q8N957 763 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 CHDHQ8NE62 594 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-224ENST00000523873 OR1J4Q8NGS1 313 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms