RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 AGAP14A8MT82 685 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 FCMRO60667 390 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 INHAP05111 366 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 CHRM4P08173 479 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 C18orf63Q68DL7 685 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 C12orf73Q69YU5 71 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 RNF165Q6ZSG1 346 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 RASSF6Q6ZTQ3 369 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 OR2T33Q8NG76 320 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 TMEM175Q9BSA9 504 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 FUZQ9BT04 418 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 OR51J1Q9H342 316 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 SEMA4GQ9NTN9 838 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 KLHL21Q9UJP4 597 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 ZNF780BQ9Y6R6 833 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 SEC16AO15027 2179 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 UNC80Q8N2C7 3258 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 SHISA3A0PJX4 238 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 OR52A4PA6NMU1 304 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 PDGFAP04085 211 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 ACRP10323 421 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 LAMP2P13473 410 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 C6P13671 934 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 MAT2AP31153 395 aaKnown RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 HCCSP53701 268 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 CAP1Q01518 475 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 SNTA1Q13424 505 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 NDUFA9Q16795 377 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 C3orf38Q5JPI3 329 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 FAM26DQ5JW98 314 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 ZNF770Q6IQ21 691 aaPredicted RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 QSOX2Q6ZRP7 698 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 FGD2Q7Z6J4 655 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 FAM98AQ8NCA5 519 aaKnown RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 VN1R2Q8NFZ6 395 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 GNPDA2Q8TDQ7 276 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 PMEPA1Q969W9 287 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 ATF6BQ99941 703 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 IL21Q9HBE4 155 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 TMEM5Q9Y2B1 443 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 GPR55Q9Y2T6 319 aaPredicted RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 CACNG2Q9Y698 323 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 CASP8AP2Q9UKL3 1982 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 IRGMA1A4Y4 181 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 H0YC42 278 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 GMFGO60234 142 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 EFCAB14O75071 495 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 EIF4EP06730 217 aaKnown RBP11.92□□□□□ -0.5
VPS52-218ENST00000482399 CTSLP07711 333 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 CXCL3P19876 107 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 PITPNBP48739 271 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 CLDN12P56749 244 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 PRR5P85299 388 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 IRF5Q13568 498 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 OCLNQ16625 522 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 ZNF613Q6PF04 617 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 KANSL1Q7Z3B3 1105 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 KIF18BQ86Y91 864 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 ANKRD53Q8N9V6 530 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 OR6K6Q8NGW6 343 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 WDFY2Q96P53 400 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 TMEM138Q9NPI0 162 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 TRIM36Q9NQ86 728 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 SPHK2Q9NRA0 654 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 HCN3Q9P1Z3 774 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 USP36Q9P275 1121 aaKnown RBP11.92□□□□□ -0.5
VPS52-218ENST00000482399 SLC7A7Q9UM01 511 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 FOXE1O00358 373 aaPredicted RBP11.92□□□□□ -0.5
VPS52-218ENST00000482399 RPP14O95059 124 aaKnown RBP11.92□□□□□ -0.5
VPS52-218ENST00000482399 SYN1P17600 705 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 HLA-DMAP28067 261 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 BTN3A2P78410 334 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 EEF1A2Q05639 463 aaKnown RBP11.92□□□□□ -0.5
VPS52-218ENST00000482399 TP53I3Q53FA7 332 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 GALNT11Q8NCW6 608 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 NUP43Q8NFH3 380 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 PRRC1Q96M27 445 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 DEFB118Q96PH6 123 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 FOLH1BQ9HBA9 442 aa11.92□□□□□ -0.5
VPS52-218ENST00000482399 HINT3Q9NQE9 182 aaKnown RBP11.92□□□□□ -0.5
VPS52-218ENST00000482399 RABL2AQ9UBK7 228 aaPredicted RBP11.92□□□□□ -0.5
VPS52-218ENST00000482399 FAM171A2A8MVW0 826 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 M0R233 179 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 NRG2O14511 850 aaPredicted RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 LCMT2O60294 686 aaKnown RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 DPM1O60762 260 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 B4GALT2O60909 372 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ABLIM3O94929 683 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 CSNK2A2P19784 350 aaPredicted RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 ITGB7P26010 798 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 CERS1P27544 350 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 RPL4P36578 427 aaKnown RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 TAS2R38P59533 333 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 MINDY4Q4G0A6 757 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ARHGAP15Q53QZ3 475 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ZNF628Q5EBL2 1059 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ENTPD8Q5MY95 495 aa11.91□□□□□ -0.5
VPS52-218ENST00000482399 ZC3H14Q6PJT7 736 aaKnown RBP11.91□□□□□ -0.5
VPS52-218ENST00000482399 HTR3DQ70Z44 454 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms