RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ZNF227Q86WZ6 799 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 DHFR2Q86XF0 187 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 RAB43Q86YS6 212 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 AQP12AQ8IXF9 295 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 KBTBD2Q8IY47 623 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 CLIP4Q8N3C7 705 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 SLC15A4Q8N697 577 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 PAPD5Q8NDF8 572 aaKnown RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 HIPK4Q8NE63 616 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 TNIP2Q8NFZ5 429 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 GPR32P1Q8NGA4 272 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 OR10Q1Q8NGQ4 319 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 FBXO30Q8TB52 745 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 FIG4Q92562 907 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 DIO2Q92813 273 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 HGDQ93099 445 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 TMBIM1Q969X1 311 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 SLCO4A1Q96BD0 722 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 TAMM41Q96BW9 452 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 TMEM19Q96HH6 336 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 PYURFQ96I23 114 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 FER1L6-AS2Q96M78 137 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 RTN4RQ9BZR6 473 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ZNF350Q9GZX5 532 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 CCDC86Q9H6F5 360 aaKnown RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 TRIM45Q9H8W5 580 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 PROK2Q9HC23 129 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 ZBTB20Q9HC78 741 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 POLE3Q9NRF9 147 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 EXD2Q9NVH0 621 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 FLRT3Q9NZU0 649 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 SUCOQ9UBS9 1254 aaKnown RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 COPS7AQ9UBW8 275 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 YARS2Q9Y2Z4 477 aaKnown RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 GPC6Q9Y625 555 aaPredicted RBP5.48□□□□□ -1.53
USP39-213ENST00000467885 WDFY3Q8IZQ1 3526 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 DSPPQ9NZW4 1301 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 SDK2Q58EX2 2172 aa5.48□□□□□ -1.53
USP39-213ENST00000467885 FER1L5A0AVI2 2057 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 NUP214P35658 2090 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 CENPVL1A0A0U1RR11 272 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 OR6C70A6NIJ9 312 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CLDN24A6NM45 220 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 C1QTNF9BB2RNN3 333 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ARPC2O15144 300 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 GSTA4O15217 222 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ACOX3O15254 700 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 SLC28A2O43868 658 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 TPST2O60704 377 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 UGT2B11O75310 529 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ENTPD5O75356 428 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CEACAM4O75871 244 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 PRKD3O94806 890 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 LGI1O95970 557 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 AK1P00568 194 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ALPPP05187 535 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 BCHEP06276 602 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 C1QTNF9P0C862 333 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CYP4B1P13584 511 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CD247P20963 164 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ATP6V1B2P21281 511 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ITPKBP27987 946 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 LCN1P31025 176 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CD96P40200 585 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ADH7P40394 386 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ST13P50502 369 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 CCL11P51671 97 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CRISP3P54108 245 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ATP12AP54707 1039 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 KCNJ10P78508 379 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 PLAURQ03405 335 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 AIMP2Q13155 320 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 ELOAQ14241 798 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 GNA13Q14344 377 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 KPNB1Q14974 876 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 ZNHIT3Q15649 155 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 GPR68Q15743 365 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 NNATQ16517 81 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 GLIPR1L2Q4G1C9 344 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 GPAT3Q53EU6 434 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CYBRD1Q53TN4 286 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 RPS26P11Q5JNZ5 115 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 ACER2Q5QJU3 275 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 ATAD3BQ5T9A4 648 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 C6orf163Q5TEZ5 329 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 HLA-DQA1Q5Y7H0 255 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 CYP2R1Q6VVX0 501 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 EIF3MQ7L2H7 374 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 GALNT10Q86SR1 603 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 PATL1Q86TB9 770 aaKnown RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 COMTD1Q86VU5 262 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 VRK2Q86Y07 508 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 APLFQ8IW19 511 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 SLC30A8Q8IWU4 369 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 SPACA3Q8IXA5 215 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 PRR22Q8IZ63 422 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 FAM86B1Q8N7N1 296 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 COX18Q8N8Q8 333 aa5.47□□□□□ -1.53
USP39-213ENST00000467885 TMEM102Q8N9M5 508 aaPredicted RBP5.47□□□□□ -1.53
USP39-213ENST00000467885 OR4D11Q8NGI4 311 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms