RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CDC26Q8NHZ8 85 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 FAM76AQ8TAV0 307 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 DUSP19Q8WTR2 217 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 CCDC126Q96EE4 140 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 ZNF845Q96IR2 970 aaPredicted RBP20.53■□□□□ 0.88
USP42-205ENST00000465073 PIGQQ9BRB3 760 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 PINK1Q9BXM7 581 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 OPN3Q9H1Y3 402 aaPredicted RBP20.53■□□□□ 0.88
USP42-205ENST00000465073 GSTO2Q9H4Y5 243 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 RNF122Q9H9V4 155 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 MID1IP1Q9NPA3 183 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 MYNNQ9NPC7 610 aa20.53■□□□□ 0.88
USP42-205ENST00000465073 DDX18Q9NVP1 670 aaKnown RBP20.53■□□□□ 0.88
USP42-205ENST00000465073 OR2M5A3KFT3 312 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 UPK1AO00322 258 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 SMPD2O60906 423 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 PSMG1O95456 288 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 CRYGSP22914 178 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 NTSP30990 170 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 PSMD4P55036 377 aaKnown RBP20.52■□□□□ 0.88
USP42-205ENST00000465073 OCRLQ01968 901 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 IMPG1Q17R60 797 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 P3H2Q8IVL5 708 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 CCNYL1Q8N7R7 359 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 ZNF592Q92610 1267 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 C1GALT1C1Q96EU7 318 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 RTN4RQ9BZR6 473 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 GLIPR2Q9H4G4 154 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 FLRT3Q9NZU0 649 aa20.52■□□□□ 0.88
USP42-205ENST00000465073 FAM171A2A8MVW0 826 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 H0YC42 278 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 C16orf97H3BN30 126 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 GOLGA8RI6L899 631 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 SIAH2O43255 324 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 SEC14L5O43304 696 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 CGAP01215 116 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 CD8BP10966 210 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 POU2F1P14859 743 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 TPD52P55327 224 aaPredicted RBP20.51■□□□□ 0.87
USP42-205ENST00000465073 SIRPAP78324 504 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 CLEC9AQ6UXN8 241 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 TRIM46Q7Z4K8 759 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 MARCH3Q86UD3 253 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 ELP4Q96EB1 424 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 AMDHD1Q96NU7 426 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 ZNF395Q9H8N7 513 aaPredicted RBP20.51■□□□□ 0.87
USP42-205ENST00000465073 DCDC2Q9UHG0 476 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 AP4B1Q9Y6B7 739 aa20.51■□□□□ 0.87
USP42-205ENST00000465073 TTC36A6NLP5 189 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 H3BML4 177 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 H3BQF6 201 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 UBFD1O14562 309 aaKnown RBP20.5■□□□□ 0.87
USP42-205ENST00000465073 IFI6P09912 130 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 PYGBP11216 843 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 FPR1P21462 350 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 KCNJ5P48544 419 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 FOXA1P55317 472 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 CLDN20P56880 219 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 RPS3AP61247 264 aaKnown RBP20.5■□□□□ 0.87
USP42-205ENST00000465073 NAA20P61599 178 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 PON3Q15166 354 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 IKBIPQ70UQ0 350 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 Q71RC1 249 aaPredicted RBP20.5■□□□□ 0.87
USP42-205ENST00000465073 OR5M1Q8NGP8 315 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 FNDC9Q8TBE3 224 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 PIK3IP1Q96FE7 263 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 LMF2Q9BU23 707 aaKnown RBP20.5■□□□□ 0.87
USP42-205ENST00000465073 C3orf14Q9HBI5 128 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 NSD1Q96L73 2696 aaPredicted RBP20.5■□□□□ 0.87
USP42-205ENST00000465073 RIPK2O43353 540 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 C17orf67Q0P5P2 114 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 ACKR1Q16570 336 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 Q5PR19 223 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 TBL1XR1Q9BZK7 514 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 STOML1Q9UBI4 398 aa20.5■□□□□ 0.87
USP42-205ENST00000465073 IGLV3-32A0A0A0MS00 114 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 FCGR2AP12318 317 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 CCKARP32238 428 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 GABRA3P34903 492 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 GUSBP1Q15486 140 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 NOXRED1Q6NXP6 359 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 PRSS57Q6UWY2 283 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 METTL25Q8N6Q8 603 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 ZNF610Q8N9Z0 462 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 GFM2Q969S9 779 aaKnown RBP20.49■□□□□ 0.87
USP42-205ENST00000465073 HHATLQ9HCP6 504 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 RRAGDQ9NQL2 400 aaPredicted RBP20.49■□□□□ 0.87
USP42-205ENST00000465073 PSMC3IPQ9P2W1 217 aaPredicted RBP20.49■□□□□ 0.87
USP42-205ENST00000465073 PROCRQ9UNN8 238 aa20.49■□□□□ 0.87
USP42-205ENST00000465073 POLR3HQ9Y535 204 aaPredicted RBP20.49■□□□□ 0.87
USP42-205ENST00000465073 VPS13CQ709C8 3753 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 CRCPO75575 148 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 RSL1D1O76021 490 aaKnown RBP20.48■□□□□ 0.87
USP42-205ENST00000465073 UTS2O95399 124 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 MYL2P10916 166 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 RFX3P48380 749 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 PRR5P85299 388 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 TMEM44Q2T9K0 475 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 ZYG11AQ6WRX3 759 aa20.48■□□□□ 0.87
USP42-205ENST00000465073 FAM214BQ7L5A3 538 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms