RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 NSD1Q96L73 2696 aaPredicted RBP13.79□□□□□ -0.2
CMSS1-202ENST00000463526 CSPG4Q6UVK1 2322 aa13.79□□□□□ -0.2
CMSS1-202ENST00000463526 COQ9O75208 318 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 SNRPAP09012 282 aaKnown RBP13.78□□□□□ -0.2
CMSS1-202ENST00000463526 ANXA4P09525 319 aaPredicted RBP13.78□□□□□ -0.2
CMSS1-202ENST00000463526 TBXA2RP21731 343 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 PSPHP78330 225 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 CKAP4Q07065 602 aaKnown RBP13.78□□□□□ -0.2
CMSS1-202ENST00000463526 DECR1Q16698 335 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 SPIN4Q56A73 249 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 SPDYAQ5MJ70 313 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 LRRN4CLQ8ND94 238 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 MDFIQ99750 246 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 PRRG4Q9BZD6 226 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 STMN4Q9H169 189 aaPredicted RBP13.78□□□□□ -0.2
CMSS1-202ENST00000463526 CLEC4AQ9UMR7 237 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 ROS1P08922 2347 aa13.78□□□□□ -0.2
CMSS1-202ENST00000463526 MYO1GB0I1T2 1018 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 AQP8O94778 261 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 OPN1LWP04000 364 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 CLK3P49761 638 aaKnown RBP13.77□□□□□ -0.21
CMSS1-202ENST00000463526 RPS3AP61247 264 aaKnown RBP13.77□□□□□ -0.21
CMSS1-202ENST00000463526 CYP27C1Q4G0S4 372 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 PRSS57Q6UWY2 283 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 C20orf204Q6ZNR8 217 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 RELL1Q8IUW5 271 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 PPP1R14CQ8TAE6 165 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 C1GALT1C1Q96EU7 318 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 RNF122Q9H9V4 155 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 DDX18Q9NVP1 670 aaKnown RBP13.77□□□□□ -0.21
CMSS1-202ENST00000463526 ZNF180Q9UJW8 692 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 NFU1Q9UMS0 254 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 ZNF175Q9Y473 711 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 TLN2Q9Y4G6 2542 aa13.77□□□□□ -0.21
CMSS1-202ENST00000463526 INAFM1C9JVW0 142 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 UPK1AO00322 258 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 CD8BP10966 210 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 DDCP20711 480 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 IMPDH1P20839 514 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 LOXP28300 417 aaPredicted RBP13.76□□□□□ -0.21
CMSS1-202ENST00000463526 EIF1AXP47813 144 aaKnown RBP13.76□□□□□ -0.21
CMSS1-202ENST00000463526 PTH2RP49190 550 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 PCYT1AP49585 367 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 PPP2R2BQ00005 443 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 GANABQ14697 944 aaKnown RBP13.76□□□□□ -0.21
CMSS1-202ENST00000463526 ALKBH2Q6NS38 261 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 PLEKHM3Q6ZWE6 761 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 MARK4Q96L34 752 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 FMO2Q99518 471 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 TBL1XR1Q9BZK7 514 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 GLIPR2Q9H4G4 154 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 Q9N2J8 555 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 MIEF1Q9NQG6 463 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 FAM120CQ9NX05 1096 aaKnown RBP13.76□□□□□ -0.21
CMSS1-202ENST00000463526 ABCG2Q9UNQ0 655 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 C19orf53Q9UNZ5 99 aaPredicted RBP13.76□□□□□ -0.21
CMSS1-202ENST00000463526 VDAC3Q9Y277 283 aa13.76□□□□□ -0.21
CMSS1-202ENST00000463526 POLR3HQ9Y535 204 aaPredicted RBP13.76□□□□□ -0.21
CMSS1-202ENST00000463526 HIVEP2P31629 2446 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 DSCAMO60469 2012 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 A0A087WUV0 522 aaPredicted RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 A0A087WV62 115 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 EXOC1LA0A1B0GW35 172 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 GXYLT2A0PJZ3 443 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 GOLGA8RI6L899 631 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 LINC01387J3KSC0 135 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 EIF1AYO14602 144 aaKnown RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 URI1O94763 535 aaPredicted RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 UTS2O95399 124 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 CNOT4O95628 575 aaKnown RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 IL33O95760 270 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 ANGPTL1O95841 491 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 PLGP00747 810 aaPredicted RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 PLAUP00749 431 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 THBDP07204 575 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 ATP5F1P24539 256 aaPredicted RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 NTSP30990 170 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 GABRA3P34903 492 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 SLC6A8P48029 635 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 ZNF763Q0D2J5 394 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 LCP2Q13094 533 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 FGFBP1Q14512 234 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 ZNHIT3Q15649 155 aaPredicted RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 IMPG1Q17R60 797 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 GALNT18Q6P9A2 607 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 FAM214BQ7L5A3 538 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 GALNT10Q86SR1 603 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 WFDC8Q8IUA0 241 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 METTL25Q8N6Q8 603 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 CCNYL1Q8N7R7 359 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 SLC9A6Q92581 669 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 GFM2Q969S9 779 aaKnown RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 MID1IP1Q9NPA3 183 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 EQTNQ9NQ60 294 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 MRTO4Q9UKD2 239 aaKnown RBP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 AP4B1Q9Y6B7 739 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
CMSS1-202ENST00000463526 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
CMSS1-202ENST00000463526 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.74□□□□□ -0.21
CMSS1-202ENST00000463526 CCDC151A5D8V7 595 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms