RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ZNF225Q9UK10 706 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 C19orf53Q9UNZ5 99 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 NDUFAF1Q9Y375 327 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMED5Q9Y3A6 229 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 L3MBTL1Q9Y468 752 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 MKI67P46013 3256 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 NUMA1Q14980 2115 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 BPTFQ12830 3046 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 GNG14A0A1W2PPG7 69 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ARHGAP10A1A4S6 786 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 DYTNA2CJ06 578 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 GSAPA4D1B5 854 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANKDD1BA6NHY2 528 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 NPIPB13A6NJU9 1138 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SHISA7A6NL88 538 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR52A4PA6NMU1 304 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 NPIPB5A8MRT5 1133 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 NPIPB4C9JG80 1138 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 C9JVG2 144 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 H0YIV9 168 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 NVLO15381 856 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZW10O43264 779 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 PCDH7O60245 1069 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SH3BGRLO75368 114 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC22A3O75751 556 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANP32DO95626 131 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SERPIND1P05546 499 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 DCNP07585 359 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ERGP11308 486 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 G6PDP11413 515 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 F3P13726 295 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 COX7A2P14406 83 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 AMD1P17707 334 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 DDX5P17844 614 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 CAPN3P20807 821 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ME2P23368 584 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 JAK1P23458 1154 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 CD27P26842 260 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 PSMB5P28074 263 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SERPINB1P30740 379 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 TIA1P31483 386 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 S100A3P33764 101 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 RPL3P39023 403 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ASMTP46597 345 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 RPS9P46781 194 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 CXCL12P48061 93 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 MRPL19P49406 292 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 COMPP49747 757 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 PDLIM4P50479 330 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCR8P51685 355 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ART1P52961 327 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 DIO3P55073 304 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 CDH12P55289 794 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 C21orf59P57076 290 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 PSME3P61289 254 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 UFM1P61960 85 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 AP2B1P63010 937 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 REEP5Q00765 189 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 FOXM1Q08050 763 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 GRIK2Q13002 908 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 RCAN2Q14206 197 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 RFTN2Q52LD8 501 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 COQ5Q5HYK3 327 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMIGD1Q6UXZ0 262 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 HACD2Q6Y1H2 254 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 Q6ZSR9 355 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 CREB3L2Q70SY1 520 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 TAF8Q7Z7C8 310 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 DHDDSQ86SQ9 333 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 PARGQ86W56 976 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 OOSP2Q86WS3 158 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 FBXW8Q8N3Y1 598 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 DEFB119Q8N690 84 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 AVL9Q8NBF6 648 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR7G3Q8NG95 312 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR2L8Q8NGY9 312 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR10G6Q8NH81 332 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 CLHC1Q8NHS4 586 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 HUS1BQ8NHY5 278 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 C2CD4CQ8TF44 421 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SETD7Q8WTS6 366 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC13A3Q8WWT9 602 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 LCN9Q8WX39 176 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 RSRC1Q96IZ7 334 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 TSSK3Q96PN8 268 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR4K3Q96R72 315 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 MTERF1Q99551 399 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 ARPC5LQ9BPX5 153 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SRMSQ9H3Y6 488 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 KLHL31Q9H511 634 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 XKR8Q9H6D3 395 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 KIR3DX1Q9H7L2 352 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 RMND5AQ9H871 391 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 IL1RL2Q9HB29 575 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 MRPS30Q9NP92 439 aaKnown RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRDM8Q9NQV8 689 aa3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 SDR39U1Q9NRG7 319 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P20-201ENST00000417997 AHSPQ9NZD4 102 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms