RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TRAPPC6AO75865 159 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 WISP2O76076 250 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 AK1P00568 194 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 PGRP06401 933 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 ACP2P11117 423 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 GABRA1P14867 456 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 PTGER4P35408 488 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 WNT3P56703 355 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 STX1BP61266 288 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 POU6F2P78424 691 aaPredicted RBP16.9■□□□□ 0.3
CHTOP-202ENST00000368687 GANABQ14697 944 aaKnown RBP16.9■□□□□ 0.3
CHTOP-202ENST00000368687 TOMM20Q15388 145 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 DUSP5Q16690 384 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 SLC9B1Q4ZJI4 515 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 SPANXN4Q5MJ08 99 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 MSANTD1Q6ZTZ1 278 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 WDR53Q7Z5U6 358 aaPredicted RBP16.9■□□□□ 0.3
CHTOP-202ENST00000368687 FGD2Q7Z6J4 655 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 CHMP6Q96FZ7 201 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 CCDC28BQ9BUN5 200 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 TBL1XR1Q9BZK7 514 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 SLCO1B3Q9NPD5 702 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 TCF7L2Q9NQB0 619 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 GPATCH2Q9NW75 528 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 PPP4R1LQ9P1A2 415 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 SH3BGRL2Q9UJC5 107 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 ACAD8Q9UKU7 415 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 MRPS18CQ9Y3D5 142 aaKnown RBP16.9■□□□□ 0.3
CHTOP-202ENST00000368687 PCNX1Q96RV3 2341 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 UQCRHLA0A096LP55 91 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 RNF103-CHMP3A0A140T963 221 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 FAM47E-STBD1D6RA91 191 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 GNB5O14775 395 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 FADS1O60427 444 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 KCNK2O95069 426 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 CELA3AP09093 270 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 GP1BBP13224 206 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 HPGDP15428 266 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 ATP6V1C1P21283 382 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 UQCRC2P22695 453 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 RFX3P48380 749 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 MRPL19P49406 292 aaKnown RBP16.89■□□□□ 0.29
CHTOP-202ENST00000368687 ANXA11P50995 505 aaKnown RBP16.89■□□□□ 0.29
CHTOP-202ENST00000368687 UFM1P61960 85 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 NHSL2Q5HYW2 709 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 XKRXQ6PP77 449 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 MAVSQ7Z434 540 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 MISPQ8IVT2 679 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 PM20D2Q8IYS1 436 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 MIER2Q8N344 545 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 ZNF808Q8N4W9 903 aaPredicted RBP16.89■□□□□ 0.29
CHTOP-202ENST00000368687 ZNF527Q8NB42 609 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 GOT1L1Q8NHS2 421 aaPredicted RBP16.89■□□□□ 0.29
CHTOP-202ENST00000368687 FAM110BQ8TC76 370 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 PIK3R3Q92569 461 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 CCDC120Q96HB5 630 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 CCDC115Q96NT0 180 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 OR52E6Q96RD3 313 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 HOXD1Q9GZZ0 328 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 PTGES2Q9H7Z7 377 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 UBQLN4Q9NRR5 601 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 TMEM45AQ9NWC5 275 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 LIPGQ9Y5X9 500 aa16.89■□□□□ 0.29
CHTOP-202ENST00000368687 NAV2Q8IVL1 2488 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 PHF3Q92576 2039 aaKnown RBP16.88■□□□□ 0.29
CHTOP-202ENST00000368687 NPIPA2E9PIF3 369 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 NPIPA3F8WFD2 350 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 SCN2BO60939 215 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 UTS2O95399 124 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 ENDOUP21128 410 aaKnown RBP16.88■□□□□ 0.29
CHTOP-202ENST00000368687 SRD5A2P31213 254 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 MAGEA8P43361 318 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 C17orf67Q0P5P2 114 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 DESI1Q6ICB0 168 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 CLECL1Q8IZS7 167 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 WDSUB1Q8N9V3 476 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 OR4K17Q8NGC6 315 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 MIPOL1Q8TD10 442 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 SLC35G5Q96KT7 338 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 OR52B2Q96RD2 323 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 OR2B2Q9GZK3 357 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 RMND5AQ9H871 391 aa16.88■□□□□ 0.29
CHTOP-202ENST00000368687 NCOA6Q14686 2063 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-202ENST00000368687 C15orf38-AP3S2A0A0A6YYH1 394 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 GXYLT2A0PJZ3 443 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 ALG1L2C9J202 215 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 SCDO00767 359 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 ZG16O60844 167 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 ACTL6AO96019 429 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 TBXA2RP21731 343 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 ACVR2AP27037 513 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 GAS1P54826 345 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 AQP5P55064 265 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 GXYLT1Q4G148 440 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 HIST2H2BCQ6DN03 193 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 AAGABQ6PD74 315 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 C6orf120Q7Z4R8 191 aa16.87■□□□□ 0.29
CHTOP-202ENST00000368687 FAM83FQ8NEG4 500 aaPredicted RBP16.87■□□□□ 0.29
CHTOP-202ENST00000368687 OR5AK3PQ8NH89 298 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms