RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 AKR1C8PQ5T2L2 129 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 SLC39A5Q6ZMH5 540 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 OR51L1Q8NGJ5 315 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 TEPSINQ96N21 525 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 NECTIN4Q96NY8 510 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 OR5B2Q96R09 309 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 SSX3Q99909 188 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 PINK1Q9BXM7 581 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 GPN2Q9H9Y4 310 aaPredicted RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 CNIH4Q9P003 139 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 RGPD2P0DJD1 1756 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 LTBP3Q9NS15 1303 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 SFTPDP35247 375 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 MC3RP41968 323 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 DAP3P51398 398 aaKnown RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 FOXA1P55317 472 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 SELENOWP63302 87 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 GALNT1Q10472 559 aaPredicted RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 PLGLAQ15195 96 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 FAM198BQ6UWH4 519 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 MAMDC4Q6UXC1 1216 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 EDARQ9UNE0 448 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 UGDHO60701 494 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 EPHA1P21709 976 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 HNRNPA2B1P22626 353 aaKnown RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 CRABP1P29762 137 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 SGSHP51688 502 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 RAB4BP61018 213 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 TP53I3Q53FA7 332 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 ANKRD54Q6NXT1 300 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 GCDHQ92947 438 aaPredicted RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 DNAJB6O75190 326 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 KNG1P01042 644 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 LCATP04180 440 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 PCGF2P35227 344 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 SLC6A8P48029 635 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 PPP5CP53041 499 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 ZNF33BQ06732 778 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 DSC1Q08554 894 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 BCL2A1Q16548 175 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 GTDC1Q4AE62 458 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 C6orf132Q5T0Z8 1188 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 PGM2L1Q6PCE3 622 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 COMMD7Q86VX2 200 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 PRR18Q8N4B5 295 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 ACVR1CQ8NER5 493 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 CPT1CQ8TCG5 803 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 KLHL13Q9P2N7 655 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 LSM5Q9Y4Y9 91 aaKnown RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 CHD2O14647 1828 aaKnown RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 IFNA4P05014 189 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 WNT4P56705 351 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 SNRPD2P62316 118 aaKnown RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 RAB33AQ14088 237 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 NKPD1Q17RQ9 610 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 ZNF789Q5FWF6 425 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 ZNF695Q8IW36 515 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 SFXN5Q8TD22 340 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 NPRL2Q8WTW4 380 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 FAM71F1Q96KD3 344 aaPredicted RBP10.92□□□□□ -0.66
LAMA4-201ENST00000230538 HYLS1Q96M11 299 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 ZNF160Q9HCG1 818 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 DMRT3Q9NQL9 472 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 RIMS3Q9UJD0 308 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 B3GNT3Q9Y2A9 372 aa10.92□□□□□ -0.66
LAMA4-201ENST00000230538 C17orf105B2RV13 164 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 MPPED1O15442 326 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 BMP2P12643 396 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 DRD5P21918 477 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 APLNRP35414 380 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 NFATC3Q12968 1075 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 PAGE3Q5JUK9 113 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 DPY19L4Q7Z388 723 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 IGFN1Q86VF2 1251 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 PRR22Q8IZ63 422 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 PNPLA1Q8N8W4 532 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 GDPD1Q8N9F7 314 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 PAPD5Q8NDF8 572 aaKnown RBP10.91□□□□□ -0.66
LAMA4-201ENST00000230538 CNOT9Q92600 299 aaKnown RBP10.91□□□□□ -0.66
LAMA4-201ENST00000230538 TMIGD2Q96BF3 282 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 SCML1Q9UN30 329 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 SPO11Q9Y5K1 396 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 A6NIZ1 184 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 H3BML4 177 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 SC5DO75845 299 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 PABPC4LP0CB38 370 aaKnown RBP10.91□□□□□ -0.66
LAMA4-201ENST00000230538 IVDP26440 423 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 BMPR1AP36894 532 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 CAV3P56539 151 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 RAP1BP61224 184 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 RAP1AP62834 184 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 MS4A2Q01362 244 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 LSAMPQ13449 338 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 ABHD17BQ5VST6 288 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 PM20D1Q6GTS8 502 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 GTPBP8Q8N3Z3 284 aaPredicted RBP10.91□□□□□ -0.66
LAMA4-201ENST00000230538 CDRT4Q8N9R6 151 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 OR56B2PQ8NGI1 322 aa10.91□□□□□ -0.66
LAMA4-201ENST00000230538 CD200R1Q8TD46 325 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms